RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 OMA1Q96E52 524 aa8.15□□□□□ -1.1
DDX56-211ENST00000479602 COL21A1Q96P44 957 aa8.15□□□□□ -1.1
DDX56-211ENST00000479602 OR7D2Q96RA2 312 aa8.15□□□□□ -1.1
DDX56-211ENST00000479602 ANGPTL4Q9BY76 406 aa8.15□□□□□ -1.1
DDX56-211ENST00000479602 FAM107BQ9H098 131 aa8.15□□□□□ -1.1
DDX56-211ENST00000479602 CDCP1Q9H5V8 836 aa8.15□□□□□ -1.1
DDX56-211ENST00000479602 RUBCNLQ9H714 662 aa8.15□□□□□ -1.1
DDX56-211ENST00000479602 EXOSC3Q9NQT5 275 aaKnown RBP8.15□□□□□ -1.1
DDX56-211ENST00000479602 SLC6A13Q9NSD5 602 aa8.15□□□□□ -1.1
DDX56-211ENST00000479602 HPF1Q9NWY4 346 aa8.15□□□□□ -1.1
DDX56-211ENST00000479602 ARMCX1Q9P291 453 aa8.15□□□□□ -1.1
DDX56-211ENST00000479602 P2RX2Q9UBL9 471 aa8.15□□□□□ -1.1
DDX56-211ENST00000479602 TAGLN3Q9UI15 199 aa8.15□□□□□ -1.1
DDX56-211ENST00000479602 CNOT11Q9UKZ1 510 aaKnown RBP8.15□□□□□ -1.1
DDX56-211ENST00000479602 MED13LQ71F56 2210 aa8.15□□□□□ -1.1
DDX56-211ENST00000479602 A0A0G2JPF8 293 aa8.14□□□□□ -1.11
DDX56-211ENST00000479602 HNRNPCL2B2RXH8 293 aa8.14□□□□□ -1.11
DDX56-211ENST00000479602 HNRNPCL3B7ZW38 293 aa8.14□□□□□ -1.11
DDX56-211ENST00000479602 FAAHO00519 579 aa8.14□□□□□ -1.11
DDX56-211ENST00000479602 STX11O75558 287 aa8.14□□□□□ -1.11
DDX56-211ENST00000479602 SLC25A12O75746 678 aa8.14□□□□□ -1.11
DDX56-211ENST00000479602 ATP5HO75947 161 aa8.14□□□□□ -1.11
DDX56-211ENST00000479602 GLSO94925 669 aaPredicted RBP8.14□□□□□ -1.11
DDX56-211ENST00000479602 OR6B1O95007 311 aa8.14□□□□□ -1.11
DDX56-211ENST00000479602 ANP32DO95626 131 aa8.14□□□□□ -1.11
DDX56-211ENST00000479602 THBS1P07996 1170 aa8.14□□□□□ -1.11
DDX56-211ENST00000479602 TFPTP0C1Z6 253 aa8.14□□□□□ -1.11
DDX56-211ENST00000479602 HNRNPCL4P0DMR1 293 aa8.14□□□□□ -1.11
DDX56-211ENST00000479602 HSD17B1P14061 328 aa8.14□□□□□ -1.11
DDX56-211ENST00000479602 CD46P15529 392 aa8.14□□□□□ -1.11
DDX56-211ENST00000479602 MATN1P21941 496 aa8.14□□□□□ -1.11
DDX56-211ENST00000479602 CHI3L1P36222 383 aaPredicted RBP8.14□□□□□ -1.11
DDX56-211ENST00000479602 SOX3P41225 446 aa8.14□□□□□ -1.11
DDX56-211ENST00000479602 NR0B1P51843 470 aaKnown RBP8.14□□□□□ -1.11
DDX56-211ENST00000479602 CRISP3P54108 245 aa8.14□□□□□ -1.11
DDX56-211ENST00000479602 GAS1P54826 345 aa8.14□□□□□ -1.11
DDX56-211ENST00000479602 SUMO3P55854 103 aaPredicted RBP8.14□□□□□ -1.11
DDX56-211ENST00000479602 NME5P56597 212 aa8.14□□□□□ -1.11
DDX56-211ENST00000479602 PCBP3P57721 371 aaKnown RBP8.14□□□□□ -1.11
DDX56-211ENST00000479602 CORO7P57737 925 aa8.14□□□□□ -1.11
DDX56-211ENST00000479602 EEFSECP57772 596 aaKnown RBP8.14□□□□□ -1.11
DDX56-211ENST00000479602 KRTAP10-9P60411 292 aa8.14□□□□□ -1.11
DDX56-211ENST00000479602 DSTNP60981 165 aa8.14□□□□□ -1.11
DDX56-211ENST00000479602 NFYCQ13952 458 aa8.14□□□□□ -1.11
DDX56-211ENST00000479602 GANABQ14697 944 aaKnown RBP8.14□□□□□ -1.11
DDX56-211ENST00000479602 RNF220Q5VTB9 566 aa8.14□□□□□ -1.11
DDX56-211ENST00000479602 FNDC7Q5VTL7 733 aa8.14□□□□□ -1.11
DDX56-211ENST00000479602 NANOGP8Q6NSW7 305 aa8.14□□□□□ -1.11
DDX56-211ENST00000479602 ZNF621Q6ZSS3 439 aa8.14□□□□□ -1.11
DDX56-211ENST00000479602 CCDC80Q76M96 950 aa8.14□□□□□ -1.11
DDX56-211ENST00000479602 RNF130Q86XS8 419 aa8.14□□□□□ -1.11
DDX56-211ENST00000479602 SLC44A2Q8IWA5 706 aaPredicted RBP8.14□□□□□ -1.11
DDX56-211ENST00000479602 TMEM156Q8N614 296 aa8.14□□□□□ -1.11
DDX56-211ENST00000479602 ZNF527Q8NB42 609 aa8.14□□□□□ -1.11
DDX56-211ENST00000479602 NUDT8Q8WV74 236 aa8.14□□□□□ -1.11
DDX56-211ENST00000479602 TMEM125Q96AQ2 219 aa8.14□□□□□ -1.11
DDX56-211ENST00000479602 C14orf79Q96F83 325 aa8.14□□□□□ -1.11
DDX56-211ENST00000479602 REXO5Q96IC2 774 aaKnown RBP8.14□□□□□ -1.11
DDX56-211ENST00000479602 GAL3ST4Q96RP7 486 aa8.14□□□□□ -1.11
DDX56-211ENST00000479602 SDF2Q99470 211 aa8.14□□□□□ -1.11
DDX56-211ENST00000479602 NANOGQ9H9S0 305 aa8.14□□□□□ -1.11
DDX56-211ENST00000479602 SPAG4Q9NPE6 437 aa8.14□□□□□ -1.11
DDX56-211ENST00000479602 UBQLN4Q9NRR5 601 aa8.14□□□□□ -1.11
DDX56-211ENST00000479602 PLSCR2Q9NRY7 297 aa8.14□□□□□ -1.11
DDX56-211ENST00000479602 SACM1LQ9NTJ5 587 aa8.14□□□□□ -1.11
DDX56-211ENST00000479602 LRFN1Q9P244 771 aa8.14□□□□□ -1.11
DDX56-211ENST00000479602 TINAGQ9UJW2 476 aa8.14□□□□□ -1.11
DDX56-211ENST00000479602 SNX8Q9Y5X2 465 aa8.14□□□□□ -1.11
DDX56-211ENST00000479602 ANKHD1Q8IWZ3 2542 aaKnown RBP8.14□□□□□ -1.11
DDX56-211ENST00000479602 ZNF407Q9C0G0 2248 aa8.14□□□□□ -1.11
DDX56-211ENST00000479602 VPS13CQ709C8 3753 aa8.13□□□□□ -1.11
DDX56-211ENST00000479602 DNHD1Q96M86 4753 aa8.13□□□□□ -1.11
DDX56-211ENST00000479602 C7orf72A4D263 438 aa8.13□□□□□ -1.11
DDX56-211ENST00000479602 TMEM247A6NEH6 219 aa8.13□□□□□ -1.11
DDX56-211ENST00000479602 AGAP5A6NIR3 686 aa8.13□□□□□ -1.11
DDX56-211ENST00000479602 FAM220BPB1ANY3 271 aa8.13□□□□□ -1.11
DDX56-211ENST00000479602 C9JVG2 144 aa8.13□□□□□ -1.11
DDX56-211ENST00000479602 E9PLN8 166 aa8.13□□□□□ -1.11
DDX56-211ENST00000479602 WWP2O00308 870 aa8.13□□□□□ -1.11
DDX56-211ENST00000479602 HS6ST1O60243 411 aa8.13□□□□□ -1.11
DDX56-211ENST00000479602 UGT2B11O75310 529 aa8.13□□□□□ -1.11
DDX56-211ENST00000479602 TRIM3O75382 744 aaPredicted RBP8.13□□□□□ -1.11
DDX56-211ENST00000479602 CLDN14O95500 239 aa8.13□□□□□ -1.11
DDX56-211ENST00000479602 CPSF4O95639 269 aaKnown RBP8.13□□□□□ -1.11
DDX56-211ENST00000479602 HOXB6P17509 224 aaKnown RBP8.13□□□□□ -1.11
DDX56-211ENST00000479602 MSX1P28360 303 aa8.13□□□□□ -1.11
DDX56-211ENST00000479602 GABRA3P34903 492 aa8.13□□□□□ -1.11
DDX56-211ENST00000479602 EVI2BP34910 448 aa8.13□□□□□ -1.11
DDX56-211ENST00000479602 PCGF2P35227 344 aa8.13□□□□□ -1.11
DDX56-211ENST00000479602 SOAT1P35610 550 aa8.13□□□□□ -1.11
DDX56-211ENST00000479602 KRT20P35900 424 aa8.13□□□□□ -1.11
DDX56-211ENST00000479602 CPOXP36551 454 aa8.13□□□□□ -1.11
DDX56-211ENST00000479602 PTGDSP41222 190 aa8.13□□□□□ -1.11
DDX56-211ENST00000479602 CASP3P42574 277 aa8.13□□□□□ -1.11
DDX56-211ENST00000479602 ATP12AP54707 1039 aa8.13□□□□□ -1.11
DDX56-211ENST00000479602 RBPJQ06330 500 aa8.13□□□□□ -1.11
DDX56-211ENST00000479602 FOXO1Q12778 655 aa8.13□□□□□ -1.11
DDX56-211ENST00000479602 MAPK11Q15759 364 aa8.13□□□□□ -1.11
DDX56-211ENST00000479602 ADRM1Q16186 407 aa8.13□□□□□ -1.11
DDX56-211ENST00000479602 MMEL1Q495T6 779 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms