RNA–Protein interactions for RNA: ENST00000477558.1

VPS45-207, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,425 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-207ENST00000477558 POLEQ07864 2286 aa4.84□□□□□ -1.63
VPS45-207ENST00000477558 USP9XQ93008 2570 aaPredicted RBP4.84□□□□□ -1.63
VPS45-207ENST00000477558 COL12A1Q99715 3063 aa4.84□□□□□ -1.64
VPS45-207ENST00000477558 LRRK2Q5S007 2527 aa4.83□□□□□ -1.64
VPS45-207ENST00000477558 A0A0G2JN53 185 aa4.83□□□□□ -1.64
VPS45-207ENST00000477558 ARGFXA6NJG6 315 aa4.83□□□□□ -1.64
VPS45-207ENST00000477558 K7EM74 188 aa4.83□□□□□ -1.64
VPS45-207ENST00000477558 SPAG7O75391 227 aa4.83□□□□□ -1.64
VPS45-207ENST00000477558 RSL1D1O76021 490 aaKnown RBP4.83□□□□□ -1.64
VPS45-207ENST00000477558 ZWINTO95229 277 aa4.83□□□□□ -1.64
VPS45-207ENST00000477558 PDYNP01213 254 aa4.83□□□□□ -1.64
VPS45-207ENST00000477558 KRT6AP02538 564 aa4.83□□□□□ -1.64
VPS45-207ENST00000477558 KRT6BP04259 564 aa4.83□□□□□ -1.64
VPS45-207ENST00000477558 SERPINA7P05543 415 aa4.83□□□□□ -1.64
VPS45-207ENST00000477558 SERPIND1P05546 499 aa4.83□□□□□ -1.64
VPS45-207ENST00000477558 CHRNGP07510 517 aa4.83□□□□□ -1.64
VPS45-207ENST00000477558 MYZAPP0CAP1 466 aa4.83□□□□□ -1.64
VPS45-207ENST00000477558 SFTPCP11686 197 aa4.83□□□□□ -1.64
VPS45-207ENST00000477558 PCNAP12004 261 aa4.83□□□□□ -1.64
VPS45-207ENST00000477558 CHN1P15882 459 aa4.83□□□□□ -1.64
VPS45-207ENST00000477558 MPGP29372 298 aa4.83□□□□□ -1.64
VPS45-207ENST00000477558 OTX2P32243 289 aa4.83□□□□□ -1.64
VPS45-207ENST00000477558 SSR2P43308 183 aa4.83□□□□□ -1.64
VPS45-207ENST00000477558 KRT6CP48668 564 aa4.83□□□□□ -1.64
VPS45-207ENST00000477558 TRA2BP62995 288 aaKnown RBP4.83□□□□□ -1.64
VPS45-207ENST00000477558 PHEXP78562 749 aa4.83□□□□□ -1.64
VPS45-207ENST00000477558 TGM3Q08188 693 aa4.83□□□□□ -1.64
VPS45-207ENST00000477558 IFT88Q13099 833 aa4.83□□□□□ -1.64
VPS45-207ENST00000477558 CHAF1BQ13112 559 aa4.83□□□□□ -1.64
VPS45-207ENST00000477558 AIMP2Q13155 320 aaKnown RBP4.83□□□□□ -1.64
VPS45-207ENST00000477558 ABRAXAS2Q15018 415 aa4.83□□□□□ -1.64
VPS45-207ENST00000477558 SEC23BQ15437 767 aa4.83□□□□□ -1.64
VPS45-207ENST00000477558 CEBPEQ15744 281 aa4.83□□□□□ -1.64
VPS45-207ENST00000477558 RBBP7Q16576 425 aa4.83□□□□□ -1.64
VPS45-207ENST00000477558 TTMPQ5BVD1 217 aa4.83□□□□□ -1.64
VPS45-207ENST00000477558 ARL13AQ5H913 290 aaPredicted RBP4.83□□□□□ -1.64
VPS45-207ENST00000477558 VWA5B1Q5TIE3 1220 aa4.83□□□□□ -1.64
VPS45-207ENST00000477558 AGBL2Q5U5Z8 902 aa4.83□□□□□ -1.64
VPS45-207ENST00000477558 H3F3CQ6NXT2 135 aa4.83□□□□□ -1.64
VPS45-207ENST00000477558 NDUFAF7Q7L592 441 aa4.83□□□□□ -1.64
VPS45-207ENST00000477558 COMMD6Q7Z4G1 85 aa4.83□□□□□ -1.64
VPS45-207ENST00000477558 CPEB2Q7Z5Q1 589 aaKnown RBP4.83□□□□□ -1.64
VPS45-207ENST00000477558 ANKRD37Q7Z713 158 aa4.83□□□□□ -1.64
VPS45-207ENST00000477558 CUZD1Q86UP6 607 aa4.83□□□□□ -1.64
VPS45-207ENST00000477558 HPS6Q86YV9 775 aa4.83□□□□□ -1.64
VPS45-207ENST00000477558 APCDD1LQ8NCL9 501 aa4.83□□□□□ -1.64
VPS45-207ENST00000477558 FDCSPQ8NFU4 85 aa4.83□□□□□ -1.64
VPS45-207ENST00000477558 ELP5Q8TE02 316 aa4.83□□□□□ -1.64
VPS45-207ENST00000477558 WDR60Q8WVS4 1066 aa4.83□□□□□ -1.64
VPS45-207ENST00000477558 NPIPB3Q92617 1050 aa4.83□□□□□ -1.64
VPS45-207ENST00000477558 ANKRD9Q96BM1 317 aaPredicted RBP4.83□□□□□ -1.64
VPS45-207ENST00000477558 C8orf44Q96CB5 159 aa4.83□□□□□ -1.64
VPS45-207ENST00000477558 FER1L6-AS2Q96M78 137 aa4.83□□□□□ -1.64
VPS45-207ENST00000477558 C5orf34Q96MH7 638 aa4.83□□□□□ -1.64
VPS45-207ENST00000477558 KCNA7Q96RP8 456 aa4.83□□□□□ -1.64
VPS45-207ENST00000477558 MAPKAP1Q9BPZ7 522 aa4.83□□□□□ -1.64
VPS45-207ENST00000477558 TUBB6Q9BUF5 446 aa4.83□□□□□ -1.64
VPS45-207ENST00000477558 ELOVL1Q9BW60 279 aa4.83□□□□□ -1.64
VPS45-207ENST00000477558 NUDT9Q9BW91 350 aa4.83□□□□□ -1.64
VPS45-207ENST00000477558 SORBS1Q9BX66 1292 aaKnown RBP4.83□□□□□ -1.64
VPS45-207ENST00000477558 MRPL1Q9BYD6 325 aaKnown RBP4.83□□□□□ -1.64
VPS45-207ENST00000477558 IQCGQ9H095 443 aaKnown RBP4.83□□□□□ -1.64
VPS45-207ENST00000477558 STMN4Q9H169 189 aaPredicted RBP4.83□□□□□ -1.64
VPS45-207ENST00000477558 ELOVL6Q9H5J4 265 aa4.83□□□□□ -1.64
VPS45-207ENST00000477558 MMP25Q9NPA2 562 aa4.83□□□□□ -1.64
VPS45-207ENST00000477558 ZNF446Q9NWS9 450 aa4.83□□□□□ -1.64
VPS45-207ENST00000477558 LYARQ9NX58 379 aaKnown RBP4.83□□□□□ -1.64
VPS45-207ENST00000477558 TEX10Q9NXF1 929 aaPredicted RBP4.83□□□□□ -1.64
VPS45-207ENST00000477558 MS4A12Q9NXJ0 267 aa4.83□□□□□ -1.64
VPS45-207ENST00000477558 CES1P1Q9UKY3 287 aa4.83□□□□□ -1.64
VPS45-207ENST00000477558 ATG4BQ9Y4P1 393 aa4.83□□□□□ -1.64
VPS45-207ENST00000477558 DNAJC15Q9Y5T4 150 aa4.83□□□□□ -1.64
VPS45-207ENST00000477558 HIVEP3Q5T1R4 2406 aa4.83□□□□□ -1.64
VPS45-207ENST00000477558 CROCCQ5TZA2 2017 aa4.83□□□□□ -1.64
VPS45-207ENST00000477558 GXYLT2A0PJZ3 443 aa4.82□□□□□ -1.64
VPS45-207ENST00000477558 TMEM120BA0PK00 339 aa4.82□□□□□ -1.64
VPS45-207ENST00000477558 FAM90A18PA6NE21 464 aa4.82□□□□□ -1.64
VPS45-207ENST00000477558 FAM90A16PA6NEW6 464 aa4.82□□□□□ -1.64
VPS45-207ENST00000477558 SAGE2PA6NJ88 616 aa4.82□□□□□ -1.64
VPS45-207ENST00000477558 FAM90A9PA6NNJ1 464 aa4.82□□□□□ -1.64
VPS45-207ENST00000477558 FAM90A5PA8MXJ8 464 aa4.82□□□□□ -1.64
VPS45-207ENST00000477558 TMEM114B3SHH9 223 aa4.82□□□□□ -1.64
VPS45-207ENST00000477558 MASP2O00187 686 aa4.82□□□□□ -1.64
VPS45-207ENST00000477558 SAP18O00422 153 aaKnown RBP4.82□□□□□ -1.64
VPS45-207ENST00000477558 KLF11O14901 512 aa4.82□□□□□ -1.64
VPS45-207ENST00000477558 AZIN1O14977 448 aa4.82□□□□□ -1.64
VPS45-207ENST00000477558 LSM1O15116 133 aaKnown RBP4.82□□□□□ -1.64
VPS45-207ENST00000477558 FGF17O60258 216 aa4.82□□□□□ -1.64
VPS45-207ENST00000477558 CTNSO60931 367 aa4.82□□□□□ -1.64
VPS45-207ENST00000477558 SNNO75324 88 aaPredicted RBP4.82□□□□□ -1.64
VPS45-207ENST00000477558 CDC123O75794 336 aaPredicted RBP4.82□□□□□ -1.64
VPS45-207ENST00000477558 SORBS2O94875 1100 aaKnown RBP4.82□□□□□ -1.64
VPS45-207ENST00000477558 AIFM1O95831 613 aa4.82□□□□□ -1.64
VPS45-207ENST00000477558 IGKV3-11P04433 115 aa4.82□□□□□ -1.64
VPS45-207ENST00000477558 SERPINE1P05121 402 aa4.82□□□□□ -1.64
VPS45-207ENST00000477558 FAM58BPP0C7Q3 252 aa4.82□□□□□ -1.64
VPS45-207ENST00000477558 FAM90A15PP0C7V4 464 aa4.82□□□□□ -1.64
VPS45-207ENST00000477558 FAM90A14PP0C7W9 464 aa4.82□□□□□ -1.64
VPS45-207ENST00000477558 PRR35P0CG20 571 aa4.82□□□□□ -1.64
VPS45-207ENST00000477558 UROSP10746 265 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms