RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 A0A0J9YY10 115 aa10.34□□□□□ -0.75
VAPB-204ENST00000475243 TRBV11-1A0A0K0K1C0 115 aa10.34□□□□□ -0.75
VAPB-204ENST00000475243 APOC3P02656 99 aa10.34□□□□□ -0.75
VAPB-204ENST00000475243 HBQ1P09105 142 aa10.34□□□□□ -0.75
VAPB-204ENST00000475243 LIPCP11150 499 aa10.34□□□□□ -0.75
VAPB-204ENST00000475243 PSMB5P28074 263 aa10.34□□□□□ -0.75
VAPB-204ENST00000475243 CAMLGP49069 296 aa10.34□□□□□ -0.75
VAPB-204ENST00000475243 POLR2HP52434 150 aaKnown RBP10.34□□□□□ -0.75
VAPB-204ENST00000475243 NR0B2Q15466 257 aa10.34□□□□□ -0.75
VAPB-204ENST00000475243 TMEM31Q5JXX7 168 aa10.34□□□□□ -0.75
VAPB-204ENST00000475243 EMC10Q5UCC4 262 aa10.34□□□□□ -0.75
VAPB-204ENST00000475243 FGF13Q92913 245 aa10.34□□□□□ -0.75
VAPB-204ENST00000475243 OR5B12Q96R08 314 aa10.34□□□□□ -0.75
VAPB-204ENST00000475243 SSX3Q99909 188 aa10.34□□□□□ -0.75
VAPB-204ENST00000475243 NUDT22Q9BRQ3 303 aa10.34□□□□□ -0.75
VAPB-204ENST00000475243 CA5BQ9Y2D0 317 aa10.34□□□□□ -0.75
VAPB-204ENST00000475243 CARD8Q9Y2G2 431 aa10.34□□□□□ -0.75
VAPB-204ENST00000475243 CHMP24386 653 aa10.34□□□□□ -0.75
VAPB-204ENST00000475243 CDK3Q00526 305 aa10.34□□□□□ -0.75
VAPB-204ENST00000475243 IRF4Q15306 451 aa10.34□□□□□ -0.75
VAPB-204ENST00000475243 RANBP10Q6VN20 620 aa10.34□□□□□ -0.75
VAPB-204ENST00000475243 MARVELD2Q8N4S9 558 aa10.34□□□□□ -0.75
VAPB-204ENST00000475243 SFXN5Q8TD22 340 aa10.34□□□□□ -0.75
VAPB-204ENST00000475243 DNAJB11Q9UBS4 358 aa10.34□□□□□ -0.75
VAPB-204ENST00000475243 PCDHGA7Q9Y5G6 932 aa10.34□□□□□ -0.75
VAPB-204ENST00000475243 TRAV27A0A087WT01 109 aa10.34□□□□□ -0.75
VAPB-204ENST00000475243 XCR1P46094 333 aa10.34□□□□□ -0.75
VAPB-204ENST00000475243 PM20D1Q6GTS8 502 aa10.34□□□□□ -0.75
VAPB-204ENST00000475243 TMEFF1Q8IYR6 380 aa10.34□□□□□ -0.75
VAPB-204ENST00000475243 DTWD1Q8N5C7 304 aa10.34□□□□□ -0.75
VAPB-204ENST00000475243 FBXO27Q8NI29 283 aa10.34□□□□□ -0.75
VAPB-204ENST00000475243 TM9SF4Q92544 642 aa10.34□□□□□ -0.75
VAPB-204ENST00000475243 B3GNT3Q9Y2A9 372 aa10.34□□□□□ -0.75
VAPB-204ENST00000475243 PHYHO14832 338 aa10.33□□□□□ -0.76
VAPB-204ENST00000475243 SERPINA5P05154 406 aa10.33□□□□□ -0.76
VAPB-204ENST00000475243 PRPS1P60891 318 aa10.33□□□□□ -0.76
VAPB-204ENST00000475243 PNCKQ6P2M8 343 aa10.33□□□□□ -0.76
VAPB-204ENST00000475243 VASH1Q7L8A9 365 aaPredicted RBP10.33□□□□□ -0.76
VAPB-204ENST00000475243 ZNF695Q8IW36 515 aa10.33□□□□□ -0.76
VAPB-204ENST00000475243 IL1F10Q8WWZ1 152 aa10.33□□□□□ -0.76
VAPB-204ENST00000475243 AP1M2Q9Y6Q5 423 aa10.33□□□□□ -0.76
VAPB-204ENST00000475243 KLHL33A6NCF5 533 aa10.33□□□□□ -0.76
VAPB-204ENST00000475243 FAM183AA6NL82 134 aa10.33□□□□□ -0.76
VAPB-204ENST00000475243 M0QZQ0 153 aa10.33□□□□□ -0.76
VAPB-204ENST00000475243 UBFD1O14562 309 aaKnown RBP10.33□□□□□ -0.76
VAPB-204ENST00000475243 CYBAP13498 195 aa10.33□□□□□ -0.76
VAPB-204ENST00000475243 ABOP16442 354 aa10.33□□□□□ -0.76
VAPB-204ENST00000475243 ZNF136P52737 540 aa10.33□□□□□ -0.76
VAPB-204ENST00000475243 PTPRRQ15256 657 aa10.33□□□□□ -0.76
VAPB-204ENST00000475243 SIX1Q15475 284 aaPredicted RBP10.33□□□□□ -0.76
VAPB-204ENST00000475243 NADSYN1Q6IA69 706 aa10.33□□□□□ -0.76
VAPB-204ENST00000475243 LCN8Q6JVE9 175 aa10.33□□□□□ -0.76
VAPB-204ENST00000475243 ADAMTS18Q8TE60 1221 aa10.33□□□□□ -0.76
VAPB-204ENST00000475243 BMFQ96LC9 184 aa10.33□□□□□ -0.76
VAPB-204ENST00000475243 GSTO2Q9H4Y5 243 aa10.33□□□□□ -0.76
VAPB-204ENST00000475243 KDM4EB2RXH2 506 aaPredicted RBP10.33□□□□□ -0.76
VAPB-204ENST00000475243 NDUFB2O95178 105 aa10.33□□□□□ -0.76
VAPB-204ENST00000475243 ACY1Q03154 408 aa10.33□□□□□ -0.76
VAPB-204ENST00000475243 TUBB3Q13509 450 aa10.33□□□□□ -0.76
VAPB-204ENST00000475243 SLC22A6Q4U2R8 563 aa10.33□□□□□ -0.76
VAPB-204ENST00000475243 FBXO46Q6PJ61 603 aaPredicted RBP10.33□□□□□ -0.76
VAPB-204ENST00000475243 TMEM150AQ86TG1 271 aa10.33□□□□□ -0.76
VAPB-204ENST00000475243 CHDHQ8NE62 594 aaPredicted RBP10.33□□□□□ -0.76
VAPB-204ENST00000475243 SACM1LQ9NTJ5 587 aa10.33□□□□□ -0.76
VAPB-204ENST00000475243 ANTXRLA6NF34 631 aa10.33□□□□□ -0.76
VAPB-204ENST00000475243 HHLA1C9JL84 531 aa10.33□□□□□ -0.76
VAPB-204ENST00000475243 SNNO75324 88 aaPredicted RBP10.33□□□□□ -0.76
VAPB-204ENST00000475243 PROZP22891 400 aa10.33□□□□□ -0.76
VAPB-204ENST00000475243 ERP29P30040 261 aaKnown RBP10.33□□□□□ -0.76
VAPB-204ENST00000475243 RPS5P46782 204 aaKnown RBP10.33□□□□□ -0.76
VAPB-204ENST00000475243 MS4A2Q01362 244 aa10.33□□□□□ -0.76
VAPB-204ENST00000475243 ELP2Q6IA86 826 aa10.33□□□□□ -0.76
VAPB-204ENST00000475243 OR56B2PQ8NGI1 322 aa10.33□□□□□ -0.76
VAPB-204ENST00000475243 SLC2A12Q8TD20 617 aa10.33□□□□□ -0.76
VAPB-204ENST00000475243 CAMK2AQ9UQM7 478 aa10.33□□□□□ -0.76
VAPB-204ENST00000475243 CACNA1SQ13698 1873 aa10.33□□□□□ -0.76
VAPB-204ENST00000475243 RP1L1Q8IWN7 2480 aaPredicted RBP10.33□□□□□ -0.76
VAPB-204ENST00000475243 DDCP20711 480 aa10.33□□□□□ -0.76
VAPB-204ENST00000475243 ITGB7P26010 798 aa10.33□□□□□ -0.76
VAPB-204ENST00000475243 CAV2P51636 162 aa10.33□□□□□ -0.76
VAPB-204ENST00000475243 SLC46A2Q9BY10 475 aa10.33□□□□□ -0.76
VAPB-204ENST00000475243 CD93Q9NPY3 652 aa10.33□□□□□ -0.76
VAPB-204ENST00000475243 PCDHA9Q9Y5H5 950 aa10.33□□□□□ -0.76
VAPB-204ENST00000475243 PRSS21Q9Y6M0 314 aa10.33□□□□□ -0.76
VAPB-204ENST00000475243 ZCWPW2A0A1B0GU75 182 aa10.33□□□□□ -0.76
VAPB-204ENST00000475243 KRBA1A5PL33 1030 aa10.33□□□□□ -0.76
VAPB-204ENST00000475243 GABRR3A8MPY1 467 aa10.33□□□□□ -0.76
VAPB-204ENST00000475243 BOLA2-SMG1P6H3BVE0 249 aa10.33□□□□□ -0.76
VAPB-204ENST00000475243 TIMP2P16035 220 aa10.33□□□□□ -0.76
VAPB-204ENST00000475243 GDF1P27539 372 aa10.33□□□□□ -0.76
VAPB-204ENST00000475243 HTR2AP28223 471 aa10.33□□□□□ -0.76
VAPB-204ENST00000475243 C17orf99Q6UX52 265 aa10.33□□□□□ -0.76
VAPB-204ENST00000475243 MCATQ8IVS2 390 aaKnown RBP10.33□□□□□ -0.76
VAPB-204ENST00000475243 TMEM239Q8WW34 195 aa10.33□□□□□ -0.76
VAPB-204ENST00000475243 SENP5Q96HI0 755 aaPredicted RBP10.33□□□□□ -0.76
VAPB-204ENST00000475243 PHB2Q99623 299 aa10.33□□□□□ -0.76
VAPB-204ENST00000475243 SULT4A1Q9BR01 284 aa10.33□□□□□ -0.76
VAPB-204ENST00000475243 PRSS38A1L453 326 aa10.32□□□□□ -0.76
VAPB-204ENST00000475243 B4GAT1O43505 415 aa10.32□□□□□ -0.76
VAPB-204ENST00000475243 GCH1P30793 250 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms