RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 TCP10LQ8TDR4 215 aa18.34■□□□□ 0.53
PDLIM4-206ENST00000474421 FIG4Q92562 907 aa18.34■□□□□ 0.53
PDLIM4-206ENST00000474421 ZNF845Q96IR2 970 aaPredicted RBP18.34■□□□□ 0.53
PDLIM4-206ENST00000474421 TMUB1Q9BVT8 246 aa18.34■□□□□ 0.53
PDLIM4-206ENST00000474421 PLEKHF2Q9H8W4 249 aa18.34■□□□□ 0.53
PDLIM4-206ENST00000474421 RNF122Q9H9V4 155 aa18.34■□□□□ 0.53
PDLIM4-206ENST00000474421 UBQLN4Q9NRR5 601 aa18.34■□□□□ 0.53
PDLIM4-206ENST00000474421 ELOVL5Q9NYP7 299 aa18.34■□□□□ 0.53
PDLIM4-206ENST00000474421 SLC17A7Q9P2U7 560 aa18.34■□□□□ 0.53
PDLIM4-206ENST00000474421 SCAMP2O15127 329 aaKnown RBP18.33■□□□□ 0.52
PDLIM4-206ENST00000474421 LYPLA1O75608 230 aaPredicted RBP18.33■□□□□ 0.52
PDLIM4-206ENST00000474421 SOX30O94993 753 aa18.33■□□□□ 0.52
PDLIM4-206ENST00000474421 HRGP04196 525 aa18.33■□□□□ 0.52
PDLIM4-206ENST00000474421 ACP2P11117 423 aa18.33■□□□□ 0.52
PDLIM4-206ENST00000474421 CD79BP40259 229 aa18.33■□□□□ 0.52
PDLIM4-206ENST00000474421 KIR2DL2P43627 348 aaPredicted RBP18.33■□□□□ 0.52
PDLIM4-206ENST00000474421 CLDN20P56880 219 aa18.33■□□□□ 0.52
PDLIM4-206ENST00000474421 PON3Q15166 354 aa18.33■□□□□ 0.52
PDLIM4-206ENST00000474421 SGCBQ16585 318 aa18.33■□□□□ 0.52
PDLIM4-206ENST00000474421 DUSP5Q16690 384 aa18.33■□□□□ 0.52
PDLIM4-206ENST00000474421 ATP6AP1LQ52LC2 224 aa18.33■□□□□ 0.52
PDLIM4-206ENST00000474421 COX18Q8N8Q8 333 aa18.33■□□□□ 0.52
PDLIM4-206ENST00000474421 SLC16A11Q8NCK7 471 aa18.33■□□□□ 0.52
PDLIM4-206ENST00000474421 OR4C3Q8NH37 302 aa18.33■□□□□ 0.52
PDLIM4-206ENST00000474421 FNDC9Q8TBE3 224 aa18.33■□□□□ 0.52
PDLIM4-206ENST00000474421 ACTRT2Q8TDY3 377 aa18.33■□□□□ 0.52
PDLIM4-206ENST00000474421 ZBTB8AQ96BR9 441 aa18.33■□□□□ 0.52
PDLIM4-206ENST00000474421 STACQ99469 402 aa18.33■□□□□ 0.52
PDLIM4-206ENST00000474421 PRPF18Q99633 342 aaKnown RBP18.33■□□□□ 0.52
PDLIM4-206ENST00000474421 MECRQ9BV79 373 aa18.33■□□□□ 0.52
PDLIM4-206ENST00000474421 ZCCHC3Q9NUD5 404 aaKnown RBP18.33■□□□□ 0.52
PDLIM4-206ENST00000474421 ATAD3AQ9NVI7 634 aa18.33■□□□□ 0.52
PDLIM4-206ENST00000474421 PAQR5Q9NXK6 330 aaPredicted RBP18.33■□□□□ 0.52
PDLIM4-206ENST00000474421 GIN1Q9NXP7 522 aa18.33■□□□□ 0.52
PDLIM4-206ENST00000474421 TESMINQ9Y4I5 508 aa18.33■□□□□ 0.52
PDLIM4-206ENST00000474421 C7orf72A4D263 438 aa18.32■□□□□ 0.52
PDLIM4-206ENST00000474421 H0YC42 278 aa18.32■□□□□ 0.52
PDLIM4-206ENST00000474421 SCDO00767 359 aa18.32■□□□□ 0.52
PDLIM4-206ENST00000474421 SPAG7O75391 227 aa18.32■□□□□ 0.52
PDLIM4-206ENST00000474421 ATE1O95260 518 aa18.32■□□□□ 0.52
PDLIM4-206ENST00000474421 CD8BP10966 210 aa18.32■□□□□ 0.52
PDLIM4-206ENST00000474421 ZNF41P51814 821 aaPredicted RBP18.32■□□□□ 0.52
PDLIM4-206ENST00000474421 TPD52P55327 224 aaPredicted RBP18.32■□□□□ 0.52
PDLIM4-206ENST00000474421 VSNL1P62760 191 aa18.32■□□□□ 0.52
PDLIM4-206ENST00000474421 XKR7Q5GH72 579 aa18.32■□□□□ 0.52
PDLIM4-206ENST00000474421 VWA1Q6PCB0 445 aa18.32■□□□□ 0.52
PDLIM4-206ENST00000474421 EMBQ6PCB8 327 aa18.32■□□□□ 0.52
PDLIM4-206ENST00000474421 FIGNL1Q6PIW4 674 aa18.32■□□□□ 0.52
PDLIM4-206ENST00000474421 BTLAQ7Z6A9 289 aa18.32■□□□□ 0.52
PDLIM4-206ENST00000474421 WDR75Q8IWA0 830 aaKnown RBP18.32■□□□□ 0.52
PDLIM4-206ENST00000474421 GTPBP8Q8N3Z3 284 aaPredicted RBP18.32■□□□□ 0.52
PDLIM4-206ENST00000474421 FBXO30Q8TB52 745 aa18.32■□□□□ 0.52
PDLIM4-206ENST00000474421 JADE3Q92613 823 aa18.32■□□□□ 0.52
PDLIM4-206ENST00000474421 FAM120BQ96EK7 910 aaKnown RBP18.32■□□□□ 0.52
PDLIM4-206ENST00000474421 BTBD2Q9BX70 525 aa18.32■□□□□ 0.52
PDLIM4-206ENST00000474421 DUSP22Q9NRW4 184 aa18.32■□□□□ 0.52
PDLIM4-206ENST00000474421 ZNF226Q9NYT6 803 aa18.32■□□□□ 0.52
PDLIM4-206ENST00000474421 VDAC3Q9Y277 283 aa18.32■□□□□ 0.52
PDLIM4-206ENST00000474421 ZNF469Q96JG9 3925 aaPredicted RBP18.31■□□□□ 0.52
PDLIM4-206ENST00000474421 NUP214P35658 2090 aaPredicted RBP18.31■□□□□ 0.52
PDLIM4-206ENST00000474421 A0A1W2PRB8 838 aa18.31■□□□□ 0.52
PDLIM4-206ENST00000474421 GMFGO60234 142 aa18.31■□□□□ 0.52
PDLIM4-206ENST00000474421 PEX11AO75192 247 aa18.31■□□□□ 0.52
PDLIM4-206ENST00000474421 KRT16P08779 473 aa18.31■□□□□ 0.52
PDLIM4-206ENST00000474421 KLK2P20151 261 aa18.31■□□□□ 0.52
PDLIM4-206ENST00000474421 SIRPAP78324 504 aa18.31■□□□□ 0.52
PDLIM4-206ENST00000474421 POU6F2P78424 691 aaPredicted RBP18.31■□□□□ 0.52
PDLIM4-206ENST00000474421 FAM27E3Q08E93 113 aa18.31■□□□□ 0.52
PDLIM4-206ENST00000474421 DEFB113Q30KQ7 82 aa18.31■□□□□ 0.52
PDLIM4-206ENST00000474421 LSM12Q3MHD2 195 aaKnown RBP18.31■□□□□ 0.52
PDLIM4-206ENST00000474421 EXOSC6Q5RKV6 272 aaKnown RBP18.31■□□□□ 0.52
PDLIM4-206ENST00000474421 CPTPQ5TA50 214 aa18.31■□□□□ 0.52
PDLIM4-206ENST00000474421 GALNT10Q86SR1 603 aa18.31■□□□□ 0.52
PDLIM4-206ENST00000474421 AGR3Q8TD06 166 aa18.31■□□□□ 0.52
PDLIM4-206ENST00000474421 OR5P2Q8WZ92 322 aa18.31■□□□□ 0.52
PDLIM4-206ENST00000474421 C16orf58Q96GQ5 468 aa18.31■□□□□ 0.52
PDLIM4-206ENST00000474421 PRRG4Q9BZD6 226 aa18.31■□□□□ 0.52
PDLIM4-206ENST00000474421 SIRT3Q9NTG7 399 aaPredicted RBP18.31■□□□□ 0.52
PDLIM4-206ENST00000474421 A0A1W2PQD3 144 aa18.3■□□□□ 0.52
PDLIM4-206ENST00000474421 EIF1AYO14602 144 aaKnown RBP18.3■□□□□ 0.52
PDLIM4-206ENST00000474421 SLU7O95391 586 aaKnown RBP18.3■□□□□ 0.52
PDLIM4-206ENST00000474421 HMGN2P05204 90 aaKnown RBP18.3■□□□□ 0.52
PDLIM4-206ENST00000474421 POU2F1P14859 743 aa18.3■□□□□ 0.52
PDLIM4-206ENST00000474421 EIF1AXP47813 144 aaKnown RBP18.3■□□□□ 0.52
PDLIM4-206ENST00000474421 POU4F3Q15319 338 aa18.3■□□□□ 0.52
PDLIM4-206ENST00000474421 ZNF474Q6S9Z5 364 aaPredicted RBP18.3■□□□□ 0.52
PDLIM4-206ENST00000474421 ZCCHC23Q6ZST2 131 aa18.3■□□□□ 0.52
PDLIM4-206ENST00000474421 FAM214BQ7L5A3 538 aa18.3■□□□□ 0.52
PDLIM4-206ENST00000474421 GGNQ86UU5 652 aa18.3■□□□□ 0.52
PDLIM4-206ENST00000474421 FNDC5Q8NAU1 212 aa18.3■□□□□ 0.52
PDLIM4-206ENST00000474421 OR7A2PQ8NGA2 310 aa18.3■□□□□ 0.52
PDLIM4-206ENST00000474421 OR56A1Q8NGH5 318 aa18.3■□□□□ 0.52
PDLIM4-206ENST00000474421 PSMA8Q8TAA3 256 aa18.3■□□□□ 0.52
PDLIM4-206ENST00000474421 CHMP6Q96FZ7 201 aa18.3■□□□□ 0.52
PDLIM4-206ENST00000474421 HOXD1Q9GZZ0 328 aa18.3■□□□□ 0.52
PDLIM4-206ENST00000474421 OPN3Q9H1Y3 402 aaPredicted RBP18.3■□□□□ 0.52
PDLIM4-206ENST00000474421 PIGUQ9H490 435 aa18.3■□□□□ 0.52
PDLIM4-206ENST00000474421 MCTS1Q9ULC4 181 aaKnown RBP18.3■□□□□ 0.52
PDLIM4-206ENST00000474421 FAF1Q9UNN5 650 aaPredicted RBP18.3■□□□□ 0.52
PDLIM4-206ENST00000474421 PROCRQ9UNN8 238 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms