RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 ZNF100Q8IYN0 542 aa8.97□□□□□ -0.97
CDHR3-209ENST00000472116 RNF10Q8N5U6 811 aaKnown RBP8.97□□□□□ -0.97
CDHR3-209ENST00000472116 CDYL2Q8N8U2 506 aa8.97□□□□□ -0.97
CDHR3-209ENST00000472116 HUS1BQ8NHY5 278 aa8.97□□□□□ -0.97
CDHR3-209ENST00000472116 WDR60Q8WVS4 1066 aa8.97□□□□□ -0.97
CDHR3-209ENST00000472116 NEU4Q8WWR8 484 aaPredicted RBP8.97□□□□□ -0.97
CDHR3-209ENST00000472116 ADGRG7Q96K78 797 aa8.97□□□□□ -0.97
CDHR3-209ENST00000472116 KLHL15Q96M94 604 aa8.97□□□□□ -0.97
CDHR3-209ENST00000472116 KCNS3Q9BQ31 491 aa8.97□□□□□ -0.97
CDHR3-209ENST00000472116 TMEM79Q9BSE2 394 aa8.97□□□□□ -0.97
CDHR3-209ENST00000472116 TMEM185BQ9H7F4 350 aa8.97□□□□□ -0.97
CDHR3-209ENST00000472116 DDX31Q9H8H2 851 aaKnown RBP8.97□□□□□ -0.97
CDHR3-209ENST00000472116 HHATLQ9HCP6 504 aa8.97□□□□□ -0.97
CDHR3-209ENST00000472116 ESM1Q9NQ30 184 aa8.97□□□□□ -0.97
CDHR3-209ENST00000472116 NTMQ9P121 344 aa8.97□□□□□ -0.97
CDHR3-209ENST00000472116 KLHL9Q9P2J3 617 aa8.97□□□□□ -0.97
CDHR3-209ENST00000472116 PRSS50Q9UI38 385 aa8.97□□□□□ -0.97
CDHR3-209ENST00000472116 MCM8Q9UJA3 840 aa8.97□□□□□ -0.97
CDHR3-209ENST00000472116 LOC105371242A0A075B767 164 aa8.96□□□□□ -0.98
CDHR3-209ENST00000472116 A0A087WZY1 265 aa8.96□□□□□ -0.98
CDHR3-209ENST00000472116 TRAV20A0A0B4J274 112 aa8.96□□□□□ -0.98
CDHR3-209ENST00000472116 ESPNB1AK53 854 aa8.96□□□□□ -0.98
CDHR3-209ENST00000472116 B9A039 149 aa8.96□□□□□ -0.98
CDHR3-209ENST00000472116 FOXE1O00358 373 aaPredicted RBP8.96□□□□□ -0.98
CDHR3-209ENST00000472116 TIMM23O14925 209 aa8.96□□□□□ -0.98
CDHR3-209ENST00000472116 SCAMP2O15127 329 aaKnown RBP8.96□□□□□ -0.98
CDHR3-209ENST00000472116 PHGDHO43175 533 aaKnown RBP8.96□□□□□ -0.98
CDHR3-209ENST00000472116 GUCY1B2O75343 617 aa8.96□□□□□ -0.98
CDHR3-209ENST00000472116 CBX7O95931 251 aa8.96□□□□□ -0.98
CDHR3-209ENST00000472116 AHSGP02765 367 aa8.96□□□□□ -0.98
CDHR3-209ENST00000472116 IGHV1-2P23083 117 aa8.96□□□□□ -0.98
CDHR3-209ENST00000472116 SERPINF1P36955 418 aa8.96□□□□□ -0.98
CDHR3-209ENST00000472116 FEN1P39748 380 aaKnown RBP8.96□□□□□ -0.98
CDHR3-209ENST00000472116 PIK3CBP42338 1070 aa8.96□□□□□ -0.98
CDHR3-209ENST00000472116 VPS41P49754 854 aa8.96□□□□□ -0.98
CDHR3-209ENST00000472116 EMDP50402 254 aa8.96□□□□□ -0.98
CDHR3-209ENST00000472116 IDH3GP51553 393 aaPredicted RBP8.96□□□□□ -0.98
CDHR3-209ENST00000472116 ZNF41P51814 821 aaPredicted RBP8.96□□□□□ -0.98
CDHR3-209ENST00000472116 RAB10P61026 200 aa8.96□□□□□ -0.98
CDHR3-209ENST00000472116 C17orf67Q0P5P2 114 aa8.96□□□□□ -0.98
CDHR3-209ENST00000472116 TRIP10Q15642 601 aa8.96□□□□□ -0.98
CDHR3-209ENST00000472116 FBXO48Q5FWF7 155 aa8.96□□□□□ -0.98
CDHR3-209ENST00000472116 SULT1C3Q6IMI6 304 aa8.96□□□□□ -0.98
CDHR3-209ENST00000472116 C17orf107Q6ZR85 190 aa8.96□□□□□ -0.98
CDHR3-209ENST00000472116 SPATA19Q7Z5L4 167 aa8.96□□□□□ -0.98
CDHR3-209ENST00000472116 SLC43A2Q8N370 569 aa8.96□□□□□ -0.98
CDHR3-209ENST00000472116 LRRC57Q8N9N7 239 aa8.96□□□□□ -0.98
CDHR3-209ENST00000472116 NANPQ8TBE9 248 aa8.96□□□□□ -0.98
CDHR3-209ENST00000472116 RNF138Q8WVD3 245 aa8.96□□□□□ -0.98
CDHR3-209ENST00000472116 ESAMQ96AP7 390 aa8.96□□□□□ -0.98
CDHR3-209ENST00000472116 MTERF1Q99551 399 aaKnown RBP8.96□□□□□ -0.98
CDHR3-209ENST00000472116 TBL1XR1Q9BZK7 514 aa8.96□□□□□ -0.98
CDHR3-209ENST00000472116 SLC52A3Q9NQ40 469 aa8.96□□□□□ -0.98
CDHR3-209ENST00000472116 PPANQ9NQ55 473 aaKnown RBP8.96□□□□□ -0.98
CDHR3-209ENST00000472116 CD274Q9NZQ7 290 aa8.96□□□□□ -0.98
CDHR3-209ENST00000472116 PSME2Q9UL46 239 aa8.96□□□□□ -0.98
CDHR3-209ENST00000472116 TRAF6Q9Y4K3 522 aa8.96□□□□□ -0.98
CDHR3-209ENST00000472116 A0A0J9YW62 118 aa8.95□□□□□ -0.98
CDHR3-209ENST00000472116 A0A1W2PR80 420 aa8.95□□□□□ -0.98
CDHR3-209ENST00000472116 GJE1A6NN92 205 aa8.95□□□□□ -0.98
CDHR3-209ENST00000472116 ATP6V1G2-DDX39BF2Z307 99 aa8.95□□□□□ -0.98
CDHR3-209ENST00000472116 GOLGA6L22H0YM25 854 aa8.95□□□□□ -0.98
CDHR3-209ENST00000472116 TAPBPO15533 448 aa8.95□□□□□ -0.98
CDHR3-209ENST00000472116 MBD3O95983 291 aa8.95□□□□□ -0.98
CDHR3-209ENST00000472116 TFP02787 698 aa8.95□□□□□ -0.98
CDHR3-209ENST00000472116 GBAP04062 536 aa8.95□□□□□ -0.98
CDHR3-209ENST00000472116 CT45A8P0DMV1 189 aa8.95□□□□□ -0.98
CDHR3-209ENST00000472116 CT45A9P0DMV2 189 aa8.95□□□□□ -0.98
CDHR3-209ENST00000472116 MTHFD2P13995 350 aa8.95□□□□□ -0.98
CDHR3-209ENST00000472116 PGAM1P18669 254 aa8.95□□□□□ -0.98
CDHR3-209ENST00000472116 COX5AP20674 150 aa8.95□□□□□ -0.98
CDHR3-209ENST00000472116 PRTN3P24158 256 aa8.95□□□□□ -0.98
CDHR3-209ENST00000472116 GABRB3P28472 473 aa8.95□□□□□ -0.98
CDHR3-209ENST00000472116 SFTPDP35247 375 aa8.95□□□□□ -0.98
CDHR3-209ENST00000472116 BSGP35613 385 aa8.95□□□□□ -0.98
CDHR3-209ENST00000472116 GGT5P36269 586 aa8.95□□□□□ -0.98
CDHR3-209ENST00000472116 KHKP50053 298 aa8.95□□□□□ -0.98
CDHR3-209ENST00000472116 PPOXP50336 477 aa8.95□□□□□ -0.98
CDHR3-209ENST00000472116 CORO7P57737 925 aa8.95□□□□□ -0.98
CDHR3-209ENST00000472116 CCNG2Q16589 344 aa8.95□□□□□ -0.98
CDHR3-209ENST00000472116 TMEM44Q2T9K0 475 aa8.95□□□□□ -0.98
CDHR3-209ENST00000472116 TRMT12Q53H54 448 aaKnown RBP8.95□□□□□ -0.98
CDHR3-209ENST00000472116 CT45A2Q5DJT8 189 aa8.95□□□□□ -0.98
CDHR3-209ENST00000472116 LRRC70Q7Z2Q7 622 aa8.95□□□□□ -0.98
CDHR3-209ENST00000472116 C1QL2Q7Z5L3 287 aa8.95□□□□□ -0.98
CDHR3-209ENST00000472116 GALNT7Q86SF2 657 aa8.95□□□□□ -0.98
CDHR3-209ENST00000472116 SLC44A2Q8IWA5 706 aaPredicted RBP8.95□□□□□ -0.98
CDHR3-209ENST00000472116 CCDC170Q8IYT3 715 aa8.95□□□□□ -0.98
CDHR3-209ENST00000472116 UBE2J2Q8N2K1 259 aa8.95□□□□□ -0.98
CDHR3-209ENST00000472116 ZNF786Q8N393 782 aa8.95□□□□□ -0.98
CDHR3-209ENST00000472116 GTPBP8Q8N3Z3 284 aaPredicted RBP8.95□□□□□ -0.98
CDHR3-209ENST00000472116 RNF175Q8N4F7 328 aa8.95□□□□□ -0.98
CDHR3-209ENST00000472116 C1QTNF6Q9BXI9 259 aa8.95□□□□□ -0.98
CDHR3-209ENST00000472116 SAYSD1Q9NPB0 183 aa8.95□□□□□ -0.98
CDHR3-209ENST00000472116 PFDN4Q9NQP4 134 aa8.95□□□□□ -0.98
CDHR3-209ENST00000472116 FAM120CQ9NX05 1096 aaKnown RBP8.95□□□□□ -0.98
CDHR3-209ENST00000472116 ZNF639Q9UID6 485 aa8.95□□□□□ -0.98
CDHR3-209ENST00000472116 MRTO4Q9UKD2 239 aaKnown RBP8.95□□□□□ -0.98
CDHR3-209ENST00000472116 CORINQ9Y5Q5 1042 aa8.95□□□□□ -0.98
CDHR3-209ENST00000472116 SLC25A15Q9Y619 301 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms