RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 PRR5P85299 388 aa16.83■□□□□ 0.28
SORT1-203ENST00000471996 CSTF3Q12996 717 aaKnown RBP16.83■□□□□ 0.28
SORT1-203ENST00000471996 TRAF3Q13114 568 aa16.83■□□□□ 0.28
SORT1-203ENST00000471996 RNPS1Q15287 305 aaKnown RBP16.83■□□□□ 0.28
SORT1-203ENST00000471996 STK11Q15831 433 aa16.83■□□□□ 0.28
SORT1-203ENST00000471996 GGTA1PQ4G0N0 100 aa16.83■□□□□ 0.28
SORT1-203ENST00000471996 APOOLQ6UXV4 268 aa16.83■□□□□ 0.28
SORT1-203ENST00000471996 TDRPQ86YL5 185 aa16.83■□□□□ 0.28
SORT1-203ENST00000471996 C1orf52Q8N6N3 182 aaKnown RBP16.83■□□□□ 0.28
SORT1-203ENST00000471996 CEP112Q8N8E3 955 aa16.83■□□□□ 0.28
SORT1-203ENST00000471996 EXOSC8Q96B26 276 aaKnown RBP16.83■□□□□ 0.28
SORT1-203ENST00000471996 ZBTB8AQ96BR9 441 aa16.83■□□□□ 0.28
SORT1-203ENST00000471996 MSI2Q96DH6 328 aaKnown RBP16.83■□□□□ 0.28
SORT1-203ENST00000471996 DHRS9Q9BPW9 319 aa16.83■□□□□ 0.28
SORT1-203ENST00000471996 TMEM185BQ9H7F4 350 aa16.83■□□□□ 0.28
SORT1-203ENST00000471996 BRF2Q9HAW0 419 aa16.83■□□□□ 0.28
SORT1-203ENST00000471996 EML4Q9HC35 981 aaKnown RBP16.83■□□□□ 0.28
SORT1-203ENST00000471996 SENP1Q9P0U3 644 aa16.83■□□□□ 0.28
SORT1-203ENST00000471996 CPSF2Q9P2I0 782 aaKnown RBP16.83■□□□□ 0.28
SORT1-203ENST00000471996 PPP2R2CQ9Y2T4 447 aa16.83■□□□□ 0.28
SORT1-203ENST00000471996 MEGF8Q7Z7M0 2845 aa16.83■□□□□ 0.28
SORT1-203ENST00000471996 FREM1Q5H8C1 2179 aa16.82■□□□□ 0.28
SORT1-203ENST00000471996 GOLGA8QA0A0J9YX86 632 aa16.82■□□□□ 0.28
SORT1-203ENST00000471996 C7orf72A4D263 438 aa16.82■□□□□ 0.28
SORT1-203ENST00000471996 GOLGA8OA6NCC3 632 aa16.82■□□□□ 0.28
SORT1-203ENST00000471996 ZNF814B7Z6K7 855 aa16.82■□□□□ 0.28
SORT1-203ENST00000471996 GOLGA8NF8WBI6 632 aa16.82■□□□□ 0.28
SORT1-203ENST00000471996 H7C417 338 aa16.82■□□□□ 0.28
SORT1-203ENST00000471996 GOLGA8RI6L899 631 aa16.82■□□□□ 0.28
SORT1-203ENST00000471996 COQ9O75208 318 aa16.82■□□□□ 0.28
SORT1-203ENST00000471996 UTS2O95399 124 aa16.82■□□□□ 0.28
SORT1-203ENST00000471996 PDYNP01213 254 aa16.82■□□□□ 0.28
SORT1-203ENST00000471996 ZNF239Q16600 458 aaKnown RBP16.82■□□□□ 0.28
SORT1-203ENST00000471996 CPTPQ5TA50 214 aa16.82■□□□□ 0.28
SORT1-203ENST00000471996 BHLHB9Q6PI77 547 aa16.82■□□□□ 0.28
SORT1-203ENST00000471996 Q6ZSR9 355 aa16.82■□□□□ 0.28
SORT1-203ENST00000471996 C3orf62Q6ZUJ4 267 aa16.82■□□□□ 0.28
SORT1-203ENST00000471996 KLHL7Q8IXQ5 586 aa16.82■□□□□ 0.28
SORT1-203ENST00000471996 FAM9CQ8IZT9 166 aa16.82■□□□□ 0.28
SORT1-203ENST00000471996 MUC15Q8N387 334 aa16.82■□□□□ 0.28
SORT1-203ENST00000471996 MUCL1Q96DR8 90 aa16.82■□□□□ 0.28
SORT1-203ENST00000471996 C1orf159Q96HA4 380 aa16.82■□□□□ 0.28
SORT1-203ENST00000471996 REXO5Q96IC2 774 aaKnown RBP16.82■□□□□ 0.28
SORT1-203ENST00000471996 RNF145Q96MT1 663 aa16.82■□□□□ 0.28
SORT1-203ENST00000471996 GP6Q9HCN6 339 aa16.82■□□□□ 0.28
SORT1-203ENST00000471996 Q9N2J8 555 aa16.82■□□□□ 0.28
SORT1-203ENST00000471996 GIMAP4Q9NUV9 329 aa16.82■□□□□ 0.28
SORT1-203ENST00000471996 NPAP1Q9NZP6 1156 aa16.82■□□□□ 0.28
SORT1-203ENST00000471996 MRTO4Q9UKD2 239 aaKnown RBP16.82■□□□□ 0.28
SORT1-203ENST00000471996 SNX12Q9UMY4 172 aa16.82■□□□□ 0.28
SORT1-203ENST00000471996 PCNX3Q9H6A9 2034 aa16.82■□□□□ 0.28
SORT1-203ENST00000471996 NDUFB5O43674 189 aa16.81■□□□□ 0.28
SORT1-203ENST00000471996 IL3P08700 152 aa16.81■□□□□ 0.28
SORT1-203ENST00000471996 ME2P23368 584 aa16.81■□□□□ 0.28
SORT1-203ENST00000471996 MPIP34949 423 aa16.81■□□□□ 0.28
SORT1-203ENST00000471996 EFNA4P52798 201 aa16.81■□□□□ 0.28
SORT1-203ENST00000471996 PSMD4P55036 377 aaKnown RBP16.81■□□□□ 0.28
SORT1-203ENST00000471996 Q6ZT83 130 aa16.81■□□□□ 0.28
SORT1-203ENST00000471996 SSX8Q7RTT4 187 aa16.81■□□□□ 0.28
SORT1-203ENST00000471996 CCDC91Q7Z6B0 441 aa16.81■□□□□ 0.28
SORT1-203ENST00000471996 GAS2L3Q86XJ1 694 aa16.81■□□□□ 0.28
SORT1-203ENST00000471996 FBXL14Q8N1E6 418 aa16.81■□□□□ 0.28
SORT1-203ENST00000471996 PPM1NQ8N819 430 aa16.81■□□□□ 0.28
SORT1-203ENST00000471996 PTGR2Q8N8N7 351 aaPredicted RBP16.81■□□□□ 0.28
SORT1-203ENST00000471996 OR4F6Q8NGB9 312 aa16.81■□□□□ 0.28
SORT1-203ENST00000471996 SELENOMQ8WWX9 145 aa16.81■□□□□ 0.28
SORT1-203ENST00000471996 SLC9A6Q92581 669 aa16.81■□□□□ 0.28
SORT1-203ENST00000471996 KLHL15Q96M94 604 aa16.81■□□□□ 0.28
SORT1-203ENST00000471996 SLC35C2Q9NQQ7 365 aa16.81■□□□□ 0.28
SORT1-203ENST00000471996 NMRK1Q9NWW6 199 aa16.81■□□□□ 0.28
SORT1-203ENST00000471996 MALRD1Q5VYJ5 2156 aa16.8■□□□□ 0.28
SORT1-203ENST00000471996 A0A1W2PRB8 838 aa16.8■□□□□ 0.28
SORT1-203ENST00000471996 KIAA0513O60268 411 aa16.8■□□□□ 0.28
SORT1-203ENST00000471996 LYZL6O75951 148 aa16.8■□□□□ 0.28
SORT1-203ENST00000471996 C2P06681 752 aa16.8■□□□□ 0.28
SORT1-203ENST00000471996 YES1P07947 543 aa16.8■□□□□ 0.28
SORT1-203ENST00000471996 COL6A2P12110 1019 aa16.8■□□□□ 0.28
SORT1-203ENST00000471996 RFX3P48380 749 aa16.8■□□□□ 0.28
SORT1-203ENST00000471996 PLPPR5Q32ZL2 321 aa16.8■□□□□ 0.28
SORT1-203ENST00000471996 TIMM23BQ5SRD1 257 aa16.8■□□□□ 0.28
SORT1-203ENST00000471996 PIAS4Q8N2W9 510 aaPredicted RBP16.8■□□□□ 0.28
SORT1-203ENST00000471996 NSUN5Q96P11 429 aaKnown RBP16.8■□□□□ 0.28
SORT1-203ENST00000471996 GPR78Q96P69 363 aa16.8■□□□□ 0.28
SORT1-203ENST00000471996 PRR14Q9BWN1 585 aa16.8■□□□□ 0.28
SORT1-203ENST00000471996 C12orf65Q9H3J6 166 aaKnown RBP16.8■□□□□ 0.28
SORT1-203ENST00000471996 TIGARQ9NQ88 270 aa16.8■□□□□ 0.28
SORT1-203ENST00000471996 MED17Q9NVC6 651 aa16.8■□□□□ 0.28
SORT1-203ENST00000471996 MCM8Q9UJA3 840 aa16.8■□□□□ 0.28
SORT1-203ENST00000471996 PCTPQ9UKL6 214 aa16.8■□□□□ 0.28
SORT1-203ENST00000471996 A0A087WV62 115 aa16.79■□□□□ 0.28
SORT1-203ENST00000471996 VWC2LB2RUY7 222 aa16.79■□□□□ 0.28
SORT1-203ENST00000471996 PRKD3O94806 890 aa16.79■□□□□ 0.28
SORT1-203ENST00000471996 KLHL2O95198 593 aa16.79■□□□□ 0.28
SORT1-203ENST00000471996 FABP6P51161 128 aa16.79■□□□□ 0.28
SORT1-203ENST00000471996 GGTLC2Q14390 218 aa16.79■□□□□ 0.28
SORT1-203ENST00000471996 GRAMD1BQ3KR37 738 aa16.79■□□□□ 0.28
SORT1-203ENST00000471996 KLC3Q6P597 504 aa16.79■□□□□ 0.28
SORT1-203ENST00000471996 TRABD2AQ86V40 505 aa16.79■□□□□ 0.28
SORT1-203ENST00000471996 LILRA2Q8N149 483 aa16.79■□□□□ 0.28
SORT1-203ENST00000471996 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms