RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 IDO1P14902 403 aa12.82□□□□□ -0.36
TOP3B-215ENST00000470338 MATN1P21941 496 aa12.82□□□□□ -0.36
TOP3B-215ENST00000470338 UQCRC2P22695 453 aa12.82□□□□□ -0.36
TOP3B-215ENST00000470338 CEACAM8P31997 349 aaPredicted RBP12.82□□□□□ -0.36
TOP3B-215ENST00000470338 SOAT1P35610 550 aa12.82□□□□□ -0.36
TOP3B-215ENST00000470338 TIMP3P35625 211 aa12.82□□□□□ -0.36
TOP3B-215ENST00000470338 ZFP36L2P47974 494 aaKnown RBP12.82□□□□□ -0.36
TOP3B-215ENST00000470338 LHX2P50458 406 aa12.82□□□□□ -0.36
TOP3B-215ENST00000470338 NME5P56597 212 aa12.82□□□□□ -0.36
TOP3B-215ENST00000470338 STX5Q13190 355 aa12.82□□□□□ -0.36
TOP3B-215ENST00000470338 GSTA3Q16772 222 aa12.82□□□□□ -0.36
TOP3B-215ENST00000470338 GLYR1Q49A26 553 aaPredicted RBP12.82□□□□□ -0.36
TOP3B-215ENST00000470338 PDCD4Q53EL6 469 aaKnown RBP12.82□□□□□ -0.36
TOP3B-215ENST00000470338 DCST2Q5T1A1 773 aa12.82□□□□□ -0.36
TOP3B-215ENST00000470338 NSUN5P2Q63ZY6 315 aa12.82□□□□□ -0.36
TOP3B-215ENST00000470338 NXNQ6DKJ4 435 aa12.82□□□□□ -0.36
TOP3B-215ENST00000470338 AAGABQ6PD74 315 aa12.82□□□□□ -0.36
TOP3B-215ENST00000470338 LACC1Q8IV20 430 aa12.82□□□□□ -0.36
TOP3B-215ENST00000470338 CLEC4FQ8N1N0 589 aa12.82□□□□□ -0.36
TOP3B-215ENST00000470338 ACBD4Q8NC06 268 aa12.82□□□□□ -0.36
TOP3B-215ENST00000470338 GLB1L3Q8NCI6 653 aaPredicted RBP12.82□□□□□ -0.36
TOP3B-215ENST00000470338 C1GALT1C1Q96EU7 318 aa12.82□□□□□ -0.36
TOP3B-215ENST00000470338 CHMP6Q96FZ7 201 aa12.82□□□□□ -0.36
TOP3B-215ENST00000470338 OR52B2Q96RD2 323 aa12.82□□□□□ -0.36
TOP3B-215ENST00000470338 CALHM2Q9HA72 323 aa12.82□□□□□ -0.36
TOP3B-215ENST00000470338 SLCO1B3Q9NPD5 702 aa12.82□□□□□ -0.36
TOP3B-215ENST00000470338 RNF103-CHMP3A0A140T963 221 aa12.81□□□□□ -0.36
TOP3B-215ENST00000470338 NDUFB5O43674 189 aa12.81□□□□□ -0.36
TOP3B-215ENST00000470338 PGRP06401 933 aa12.81□□□□□ -0.36
TOP3B-215ENST00000470338 HK1P19367 917 aa12.81□□□□□ -0.36
TOP3B-215ENST00000470338 MSX1P28360 303 aa12.81□□□□□ -0.36
TOP3B-215ENST00000470338 STARP49675 285 aa12.81□□□□□ -0.36
TOP3B-215ENST00000470338 DGKQP52824 942 aa12.81□□□□□ -0.36
TOP3B-215ENST00000470338 TFF3Q07654 80 aa12.81□□□□□ -0.36
TOP3B-215ENST00000470338 LRRC74AQ0VAA2 488 aa12.81□□□□□ -0.36
TOP3B-215ENST00000470338 BCL2A1Q16548 175 aa12.81□□□□□ -0.36
TOP3B-215ENST00000470338 KLHL26Q53HC5 615 aa12.81□□□□□ -0.36
TOP3B-215ENST00000470338 AP1ARQ63HQ0 302 aa12.81□□□□□ -0.36
TOP3B-215ENST00000470338 ADGRE4PQ86SQ3 457 aa12.81□□□□□ -0.36
TOP3B-215ENST00000470338 MISPQ8IVT2 679 aa12.81□□□□□ -0.36
TOP3B-215ENST00000470338 CHDHQ8NE62 594 aaPredicted RBP12.81□□□□□ -0.36
TOP3B-215ENST00000470338 OR5D16Q8NGK9 328 aa12.81□□□□□ -0.36
TOP3B-215ENST00000470338 SFXN2Q96NB2 322 aa12.81□□□□□ -0.36
TOP3B-215ENST00000470338 UCN2Q96RP3 112 aa12.81□□□□□ -0.36
TOP3B-215ENST00000470338 SDF2Q99470 211 aa12.81□□□□□ -0.36
TOP3B-215ENST00000470338 UCK2Q9BZX2 261 aa12.81□□□□□ -0.36
TOP3B-215ENST00000470338 HOXD1Q9GZZ0 328 aa12.81□□□□□ -0.36
TOP3B-215ENST00000470338 SDR39U1Q9NRG7 319 aaPredicted RBP12.81□□□□□ -0.36
TOP3B-215ENST00000470338 INTS9Q9NV88 658 aaKnown RBP12.81□□□□□ -0.36
TOP3B-215ENST00000470338 RPH3AQ9Y2J0 694 aaPredicted RBP12.81□□□□□ -0.36
TOP3B-215ENST00000470338 APCP25054 2843 aa12.8□□□□□ -0.36
TOP3B-215ENST00000470338 TEX15Q9BXT5 2789 aa12.8□□□□□ -0.36
TOP3B-215ENST00000470338 MBD3L4A6NDZ8 208 aaPredicted RBP12.8□□□□□ -0.36
TOP3B-215ENST00000470338 MBD3L3A6NE82 208 aaPredicted RBP12.8□□□□□ -0.36
TOP3B-215ENST00000470338 MBD3L5A6NJ08 208 aaPredicted RBP12.8□□□□□ -0.36
TOP3B-215ENST00000470338 HSPB2A8KAH6 182 aa12.8□□□□□ -0.36
TOP3B-215ENST00000470338 C9JVG2 144 aa12.8□□□□□ -0.36
TOP3B-215ENST00000470338 NPIPB9F8W1W9 429 aa12.8□□□□□ -0.36
TOP3B-215ENST00000470338 LINC01387J3KSC0 135 aa12.8□□□□□ -0.36
TOP3B-215ENST00000470338 SCDO00767 359 aa12.8□□□□□ -0.36
TOP3B-215ENST00000470338 UBDO15205 165 aa12.8□□□□□ -0.36
TOP3B-215ENST00000470338 DIAPH2O60879 1101 aa12.8□□□□□ -0.36
TOP3B-215ENST00000470338 SLC22A3O75751 556 aa12.8□□□□□ -0.36
TOP3B-215ENST00000470338 IL6P05231 212 aa12.8□□□□□ -0.36
TOP3B-215ENST00000470338 HPGDP15428 266 aa12.8□□□□□ -0.36
TOP3B-215ENST00000470338 ZNF708P17019 499 aa12.8□□□□□ -0.36
TOP3B-215ENST00000470338 ATP6V1C1P21283 382 aa12.8□□□□□ -0.36
TOP3B-215ENST00000470338 CLDN18P56856 261 aa12.8□□□□□ -0.36
TOP3B-215ENST00000470338 RPS26P62854 115 aaKnown RBP12.8□□□□□ -0.36
TOP3B-215ENST00000470338 HSPB2Q16082 182 aa12.8□□□□□ -0.36
TOP3B-215ENST00000470338 TMEM44Q2T9K0 475 aa12.8□□□□□ -0.36
TOP3B-215ENST00000470338 SAXO2Q658L1 398 aa12.8□□□□□ -0.36
TOP3B-215ENST00000470338 MTERF4Q7Z6M4 381 aaKnown RBP12.8□□□□□ -0.36
TOP3B-215ENST00000470338 LIX1LQ8IVB5 337 aa12.8□□□□□ -0.36
TOP3B-215ENST00000470338 TNIP2Q8NFZ5 429 aa12.8□□□□□ -0.36
TOP3B-215ENST00000470338 MBD3L2Q8NHZ7 208 aaPredicted RBP12.8□□□□□ -0.36
TOP3B-215ENST00000470338 DYDC1Q8WWB3 177 aa12.8□□□□□ -0.36
TOP3B-215ENST00000470338 CKAP2Q8WWK9 683 aa12.8□□□□□ -0.36
TOP3B-215ENST00000470338 MARVELD3Q96A59 401 aa12.8□□□□□ -0.36
TOP3B-215ENST00000470338 NEURL3Q96EH8 262 aa12.8□□□□□ -0.36
TOP3B-215ENST00000470338 SLC35G5Q96KT7 338 aa12.8□□□□□ -0.36
TOP3B-215ENST00000470338 OR52E6Q96RD3 313 aa12.8□□□□□ -0.36
TOP3B-215ENST00000470338 ZBTB18Q99592 522 aa12.8□□□□□ -0.36
TOP3B-215ENST00000470338 TUBA1CQ9BQE3 449 aa12.8□□□□□ -0.36
TOP3B-215ENST00000470338 ENKD1Q9H0I2 346 aa12.8□□□□□ -0.36
TOP3B-215ENST00000470338 OR51I1Q9H343 314 aa12.8□□□□□ -0.36
TOP3B-215ENST00000470338 KCNJ16Q9NPI9 418 aa12.8□□□□□ -0.36
TOP3B-215ENST00000470338 ZIM2Q9NZV7 527 aa12.8□□□□□ -0.36
TOP3B-215ENST00000470338 NOTCH2Q04721 2471 aa12.79□□□□□ -0.36
TOP3B-215ENST00000470338 OR2M5A3KFT3 312 aa12.79□□□□□ -0.36
TOP3B-215ENST00000470338 NKX2-6A6NCS4 301 aa12.79□□□□□ -0.36
TOP3B-215ENST00000470338 AK1P00568 194 aa12.79□□□□□ -0.36
TOP3B-215ENST00000470338 IL2RAP01589 272 aa12.79□□□□□ -0.36
TOP3B-215ENST00000470338 GUSBP08236 651 aa12.79□□□□□ -0.36
TOP3B-215ENST00000470338 PEPDP12955 493 aa12.79□□□□□ -0.36
TOP3B-215ENST00000470338 TCEA1P23193 301 aaKnown RBP12.79□□□□□ -0.36
TOP3B-215ENST00000470338 MRPL19P49406 292 aaKnown RBP12.79□□□□□ -0.36
TOP3B-215ENST00000470338 ATP12AP54707 1039 aa12.79□□□□□ -0.36
TOP3B-215ENST00000470338 SRYQ05066 204 aa12.79□□□□□ -0.36
TOP3B-215ENST00000470338 RCAN2Q14206 197 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms