RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 SUPT3HB4E1H0 165 aa10.56□□□□□ -0.72
LSM2-209ENST00000470083 GMFGO60234 142 aa10.56□□□□□ -0.72
LSM2-209ENST00000470083 SUPT3HO75486 399 aa10.56□□□□□ -0.72
LSM2-209ENST00000470083 PGM3O95394 542 aa10.56□□□□□ -0.72
LSM2-209ENST00000470083 YES1P07947 543 aa10.56□□□□□ -0.72
LSM2-209ENST00000470083 CTAGE8P0CG41 777 aa10.56□□□□□ -0.72
LSM2-209ENST00000470083 COX5AP20674 150 aa10.56□□□□□ -0.72
LSM2-209ENST00000470083 PCMT1P22061 227 aa10.56□□□□□ -0.72
LSM2-209ENST00000470083 PSMA4P25789 261 aaKnown RBP10.56□□□□□ -0.72
LSM2-209ENST00000470083 CXCR5P32302 372 aa10.56□□□□□ -0.72
LSM2-209ENST00000470083 PSG6Q00889 435 aa10.56□□□□□ -0.72
LSM2-209ENST00000470083 LGALS3BPQ08380 585 aa10.56□□□□□ -0.72
LSM2-209ENST00000470083 C17orf67Q0P5P2 114 aa10.56□□□□□ -0.72
LSM2-209ENST00000470083 SCGB2A2Q13296 93 aa10.56□□□□□ -0.72
LSM2-209ENST00000470083 CARTPTQ16568 116 aa10.56□□□□□ -0.72
LSM2-209ENST00000470083 ZSWIM7Q19AV6 140 aa10.56□□□□□ -0.72
LSM2-209ENST00000470083 CYP27C1Q4G0S4 372 aa10.56□□□□□ -0.72
LSM2-209ENST00000470083 KLHL17Q6TDP4 642 aa10.56□□□□□ -0.72
LSM2-209ENST00000470083 RINLQ6ZS11 566 aa10.56□□□□□ -0.72
LSM2-209ENST00000470083 CTAGE4Q8IX94 777 aa10.56□□□□□ -0.72
LSM2-209ENST00000470083 PLD6Q8N2A8 252 aaKnown RBP10.56□□□□□ -0.72
LSM2-209ENST00000470083 LINC01356Q8N9X3 169 aa10.56□□□□□ -0.72
LSM2-209ENST00000470083 L3MBTL4Q8NA19 623 aa10.56□□□□□ -0.72
LSM2-209ENST00000470083 TRIM58Q8NG06 486 aa10.56□□□□□ -0.72
LSM2-209ENST00000470083 ZNF418Q8TF45 676 aaPredicted RBP10.56□□□□□ -0.72
LSM2-209ENST00000470083 HPS1Q92902 700 aa10.56□□□□□ -0.72
LSM2-209ENST00000470083 CPNE4Q96A23 557 aaPredicted RBP10.56□□□□□ -0.72
LSM2-209ENST00000470083 MTBPQ96DY7 904 aa10.56□□□□□ -0.72
LSM2-209ENST00000470083 KLHL15Q96M94 604 aa10.56□□□□□ -0.72
LSM2-209ENST00000470083 SORCS2Q96PQ0 1159 aa10.56□□□□□ -0.72
LSM2-209ENST00000470083 TRMOQ9BU70 441 aa10.56□□□□□ -0.72
LSM2-209ENST00000470083 MRPL1Q9BYD6 325 aaKnown RBP10.56□□□□□ -0.72
LSM2-209ENST00000470083 ALG9Q9H6U8 611 aa10.56□□□□□ -0.72
LSM2-209ENST00000470083 NSMCE4AQ9NXX6 385 aa10.56□□□□□ -0.72
LSM2-209ENST00000470083 AHSPQ9NZD4 102 aa10.56□□□□□ -0.72
LSM2-209ENST00000470083 LRP5LA4QPB2 252 aa10.55□□□□□ -0.72
LSM2-209ENST00000470083 TRIM77I1YAP6 450 aa10.55□□□□□ -0.72
LSM2-209ENST00000470083 UBXN8O00124 270 aa10.55□□□□□ -0.72
LSM2-209ENST00000470083 DNALI1O14645 258 aaPredicted RBP10.55□□□□□ -0.72
LSM2-209ENST00000470083 NDUFB5O43674 189 aa10.55□□□□□ -0.72
LSM2-209ENST00000470083 PLOD3O60568 738 aa10.55□□□□□ -0.72
LSM2-209ENST00000470083 KERAO60938 352 aa10.55□□□□□ -0.72
LSM2-209ENST00000470083 STMN1P16949 149 aa10.55□□□□□ -0.72
LSM2-209ENST00000470083 OR3A2P47893 321 aa10.55□□□□□ -0.72
LSM2-209ENST00000470083 HILS1P60008 231 aa10.55□□□□□ -0.72
LSM2-209ENST00000470083 CSTF3Q12996 717 aaKnown RBP10.55□□□□□ -0.72
LSM2-209ENST00000470083 TCHHL1Q5QJ38 904 aaPredicted RBP10.55□□□□□ -0.72
LSM2-209ENST00000470083 SHISA2Q6UWI4 295 aa10.55□□□□□ -0.72
LSM2-209ENST00000470083 TREML4Q6UXN2 200 aa10.55□□□□□ -0.72
LSM2-209ENST00000470083 USP43Q70EL4 1123 aa10.55□□□□□ -0.72
LSM2-209ENST00000470083 COMMD6Q7Z4G1 85 aa10.55□□□□□ -0.72
LSM2-209ENST00000470083 PEG10Q86TG7 708 aaKnown RBP10.55□□□□□ -0.72
LSM2-209ENST00000470083 ISCA2Q86U28 154 aa10.55□□□□□ -0.72
LSM2-209ENST00000470083 PDIK1LQ8N165 341 aa10.55□□□□□ -0.72
LSM2-209ENST00000470083 METTL4Q8N3J2 472 aa10.55□□□□□ -0.72
LSM2-209ENST00000470083 OR9A2Q8NGT5 310 aa10.55□□□□□ -0.72
LSM2-209ENST00000470083 FAM110BQ8TC76 370 aa10.55□□□□□ -0.72
LSM2-209ENST00000470083 ZBTB8AQ96BR9 441 aa10.55□□□□□ -0.72
LSM2-209ENST00000470083 LRRC39Q96DD0 335 aa10.55□□□□□ -0.72
LSM2-209ENST00000470083 RNF145Q96MT1 663 aa10.55□□□□□ -0.72
LSM2-209ENST00000470083 ATOH8Q96SQ7 321 aa10.55□□□□□ -0.72
LSM2-209ENST00000470083 NPAS1Q99742 590 aa10.55□□□□□ -0.72
LSM2-209ENST00000470083 ZNF747Q9BV97 191 aa10.55□□□□□ -0.72
LSM2-209ENST00000470083 SRXN1Q9BYN0 137 aa10.55□□□□□ -0.72
LSM2-209ENST00000470083 TBL1XR1Q9BZK7 514 aa10.55□□□□□ -0.72
LSM2-209ENST00000470083 TSPY26PQ9H489 355 aa10.55□□□□□ -0.72
LSM2-209ENST00000470083 MYNNQ9NPC7 610 aa10.55□□□□□ -0.72
LSM2-209ENST00000470083 TIGARQ9NQ88 270 aa10.55□□□□□ -0.72
LSM2-209ENST00000470083 TAS2R9Q9NYW1 312 aa10.55□□□□□ -0.72
LSM2-209ENST00000470083 UTS2RQ9UKP6 389 aa10.55□□□□□ -0.72
LSM2-209ENST00000470083 MTO1Q9Y2Z2 717 aaKnown RBP10.55□□□□□ -0.72
LSM2-209ENST00000470083 ACOT9Q9Y305 439 aa10.55□□□□□ -0.72
LSM2-209ENST00000470083 RNF11Q9Y3C5 154 aa10.55□□□□□ -0.72
LSM2-209ENST00000470083 TEX264Q9Y6I9 313 aa10.55□□□□□ -0.72
LSM2-209ENST00000470083 KMT2CQ8NEZ4 4911 aaKnown RBP10.54□□□□□ -0.72
LSM2-209ENST00000470083 A0A1W2PRB8 838 aa10.54□□□□□ -0.72
LSM2-209ENST00000470083 PRKD3O94806 890 aa10.54□□□□□ -0.72
LSM2-209ENST00000470083 ANGPTL1O95841 491 aa10.54□□□□□ -0.72
LSM2-209ENST00000470083 LTA4HP09960 611 aaKnown RBP10.54□□□□□ -0.72
LSM2-209ENST00000470083 IGHV1-2P23083 117 aa10.54□□□□□ -0.72
LSM2-209ENST00000470083 APEX1P27695 318 aaKnown RBP10.54□□□□□ -0.72
LSM2-209ENST00000470083 IL2RGP31785 369 aa10.54□□□□□ -0.72
LSM2-209ENST00000470083 APOBEC3AP31941 199 aaPredicted RBP10.54□□□□□ -0.72
LSM2-209ENST00000470083 LIMS1P48059 325 aa10.54□□□□□ -0.72
LSM2-209ENST00000470083 PIK3CGP48736 1102 aa10.54□□□□□ -0.72
LSM2-209ENST00000470083 ALDH9A1P49189 494 aa10.54□□□□□ -0.72
LSM2-209ENST00000470083 ZNF83P51522 516 aa10.54□□□□□ -0.72
LSM2-209ENST00000470083 CHN2P52757 468 aa10.54□□□□□ -0.72
LSM2-209ENST00000470083 DVL1P1P54792 670 aaPredicted RBP10.54□□□□□ -0.72
LSM2-209ENST00000470083 CDH15P55291 814 aa10.54□□□□□ -0.72
LSM2-209ENST00000470083 PRR5P85299 388 aa10.54□□□□□ -0.72
LSM2-209ENST00000470083 ZNF155Q12901 538 aaPredicted RBP10.54□□□□□ -0.72
LSM2-209ENST00000470083 ZKSCAN8Q15776 578 aaPredicted RBP10.54□□□□□ -0.72
LSM2-209ENST00000470083 DECR1Q16698 335 aa10.54□□□□□ -0.72
LSM2-209ENST00000470083 SWI5Q1ZZU3 235 aa10.54□□□□□ -0.72
LSM2-209ENST00000470083 PLPPR5Q32ZL2 321 aa10.54□□□□□ -0.72
LSM2-209ENST00000470083 SH2D4BQ5SQS7 431 aa10.54□□□□□ -0.72
LSM2-209ENST00000470083 CPTPQ5TA50 214 aa10.54□□□□□ -0.72
LSM2-209ENST00000470083 FCRLAQ7L513 359 aa10.54□□□□□ -0.72
LSM2-209ENST00000470083 TRABD2AQ86V40 505 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms