RNA–Protein interactions for RNA: ENST00000469585.5

PTCD3-208, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-208ENST00000469585 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.79□□□□□ -1.48
PTCD3-208ENST00000469585 NUDT13Q86X67 352 aa5.79□□□□□ -1.48
PTCD3-208ENST00000469585 APLFQ8IW19 511 aaPredicted RBP5.79□□□□□ -1.48
PTCD3-208ENST00000469585 ZNF595Q8IYB9 648 aa5.79□□□□□ -1.48
PTCD3-208ENST00000469585 SAMD14Q8IZD0 417 aaPredicted RBP5.79□□□□□ -1.48
PTCD3-208ENST00000469585 SLC5A8Q8N695 610 aa5.79□□□□□ -1.48
PTCD3-208ENST00000469585 TMEM217Q8N7C4 229 aa5.79□□□□□ -1.48
PTCD3-208ENST00000469585 GBP7Q8N8V2 638 aaPredicted RBP5.79□□□□□ -1.48
PTCD3-208ENST00000469585 SLC38A9Q8NBW4 561 aa5.79□□□□□ -1.48
PTCD3-208ENST00000469585 METTL6Q8TCB7 284 aa5.79□□□□□ -1.48
PTCD3-208ENST00000469585 TRPC4APQ8TEL6 797 aa5.79□□□□□ -1.48
PTCD3-208ENST00000469585 AENQ8WTP8 325 aaKnown RBP5.79□□□□□ -1.48
PTCD3-208ENST00000469585 DAZLQ92904 295 aaKnown RBP5.79□□□□□ -1.48
PTCD3-208ENST00000469585 ESAMQ96AP7 390 aa5.79□□□□□ -1.48
PTCD3-208ENST00000469585 C10orf90Q96M02 699 aa5.79□□□□□ -1.48
PTCD3-208ENST00000469585 FRG2BQ96QU4 278 aa5.79□□□□□ -1.48
PTCD3-208ENST00000469585 OR4K3Q96R72 315 aa5.79□□□□□ -1.48
PTCD3-208ENST00000469585 MTERF1Q99551 399 aaKnown RBP5.79□□□□□ -1.48
PTCD3-208ENST00000469585 PAIP2Q9BPZ3 127 aaKnown RBP5.79□□□□□ -1.48
PTCD3-208ENST00000469585 TMEM79Q9BSE2 394 aa5.79□□□□□ -1.48
PTCD3-208ENST00000469585 NTMT1Q9BV86 223 aa5.79□□□□□ -1.48
PTCD3-208ENST00000469585 SLC29A3Q9BZD2 475 aa5.79□□□□□ -1.48
PTCD3-208ENST00000469585 SPRY4Q9C004 299 aa5.79□□□□□ -1.48
PTCD3-208ENST00000469585 ILKAPQ9H0C8 392 aaPredicted RBP5.79□□□□□ -1.48
PTCD3-208ENST00000469585 MID1IP1Q9NPA3 183 aa5.79□□□□□ -1.48
PTCD3-208ENST00000469585 RRAGDQ9NQL2 400 aaPredicted RBP5.79□□□□□ -1.48
PTCD3-208ENST00000469585 PAPOLBQ9NRJ5 636 aaKnown RBP5.79□□□□□ -1.48
PTCD3-208ENST00000469585 P4HTMQ9NXG6 502 aa5.79□□□□□ -1.48
PTCD3-208ENST00000469585 UPB1Q9UBR1 384 aa5.79□□□□□ -1.48
PTCD3-208ENST00000469585 CTSFQ9UBX1 484 aa5.79□□□□□ -1.48
PTCD3-208ENST00000469585 FBXL4Q9UKA2 621 aa5.79□□□□□ -1.48
PTCD3-208ENST00000469585 MRPS2Q9Y399 296 aaKnown RBP5.79□□□□□ -1.48
PTCD3-208ENST00000469585 MMACHCQ9Y4U1 282 aa5.79□□□□□ -1.48
PTCD3-208ENST00000469585 CLCA3PQ9Y6N3 262 aa5.79□□□□□ -1.48
PTCD3-208ENST00000469585 ANKRD12Q6UB98 2062 aa5.79□□□□□ -1.48
PTCD3-208ENST00000469585 BPTFQ12830 3046 aa5.79□□□□□ -1.48
PTCD3-208ENST00000469585 APC2O95996 2303 aa5.79□□□□□ -1.48
PTCD3-208ENST00000469585 TRBV5-3A0A0A0MS03 114 aa5.78□□□□□ -1.48
PTCD3-208ENST00000469585 LRIT2A6NDA9 550 aa5.78□□□□□ -1.48
PTCD3-208ENST00000469585 ZNF860A6NHJ4 632 aa5.78□□□□□ -1.48
PTCD3-208ENST00000469585 A8MT66 165 aa5.78□□□□□ -1.48
PTCD3-208ENST00000469585 MAGEB17A8MXT2 336 aa5.78□□□□□ -1.48
PTCD3-208ENST00000469585 E2F3O00716 465 aa5.78□□□□□ -1.48
PTCD3-208ENST00000469585 TM9SF1O15321 606 aa5.78□□□□□ -1.48
PTCD3-208ENST00000469585 TAPBPO15533 448 aa5.78□□□□□ -1.48
PTCD3-208ENST00000469585 P2RX6O15547 441 aa5.78□□□□□ -1.48
PTCD3-208ENST00000469585 CHST10O43529 356 aa5.78□□□□□ -1.48
PTCD3-208ENST00000469585 RGS14O43566 566 aa5.78□□□□□ -1.48
PTCD3-208ENST00000469585 KLK8O60259 260 aa5.78□□□□□ -1.48
PTCD3-208ENST00000469585 LCMT2O60294 686 aaKnown RBP5.78□□□□□ -1.48
PTCD3-208ENST00000469585 OR10H2O60403 315 aa5.78□□□□□ -1.48
PTCD3-208ENST00000469585 CNOT3O75175 753 aaKnown RBP5.78□□□□□ -1.48
PTCD3-208ENST00000469585 CDC123O75794 336 aaPredicted RBP5.78□□□□□ -1.48
PTCD3-208ENST00000469585 SEMA3DO95025 777 aa5.78□□□□□ -1.48
PTCD3-208ENST00000469585 WISP3O95389 354 aaPredicted RBP5.78□□□□□ -1.48
PTCD3-208ENST00000469585 SHBGP04278 402 aa5.78□□□□□ -1.48
PTCD3-208ENST00000469585 PIK3R1P27986 724 aa5.78□□□□□ -1.48
PTCD3-208ENST00000469585 MAPK12P53778 367 aa5.78□□□□□ -1.48
PTCD3-208ENST00000469585 HSD17B7P56937 341 aa5.78□□□□□ -1.48
PTCD3-208ENST00000469585 RAB38P57729 211 aa5.78□□□□□ -1.48
PTCD3-208ENST00000469585 ARG2P78540 354 aa5.78□□□□□ -1.48
PTCD3-208ENST00000469585 CACNA1BQ00975 2339 aa5.78□□□□□ -1.48
PTCD3-208ENST00000469585 PLIN5Q00G26 463 aa5.78□□□□□ -1.48
PTCD3-208ENST00000469585 ID2Q02363 134 aa5.78□□□□□ -1.48
PTCD3-208ENST00000469585 ZNF91Q05481 1191 aa5.78□□□□□ -1.48
PTCD3-208ENST00000469585 KLRB1Q12918 225 aa5.78□□□□□ -1.48
PTCD3-208ENST00000469585 DLG1Q12959 904 aa5.78□□□□□ -1.48
PTCD3-208ENST00000469585 CSTF3Q12996 717 aaKnown RBP5.78□□□□□ -1.48
PTCD3-208ENST00000469585 CUL3Q13618 768 aa5.78□□□□□ -1.48
PTCD3-208ENST00000469585 C18orf21Q32NC0 220 aaPredicted RBP5.78□□□□□ -1.48
PTCD3-208ENST00000469585 GGTA1PQ4G0N0 100 aa5.78□□□□□ -1.48
PTCD3-208ENST00000469585 SGO1Q5FBB7 561 aa5.78□□□□□ -1.48
PTCD3-208ENST00000469585 DCAF10Q5QP82 559 aa5.78□□□□□ -1.48
PTCD3-208ENST00000469585 ZNF678Q5SXM1 525 aa5.78□□□□□ -1.48
PTCD3-208ENST00000469585 CCNYL2Q5T2Q4 361 aa5.78□□□□□ -1.48
PTCD3-208ENST00000469585 OR4C11Q6IEV9 310 aa5.78□□□□□ -1.48
PTCD3-208ENST00000469585 SHISA6Q6ZSJ9 500 aa5.78□□□□□ -1.48
PTCD3-208ENST00000469585 CPEB2Q7Z5Q1 589 aaKnown RBP5.78□□□□□ -1.48
PTCD3-208ENST00000469585 COL27A1Q8IZC6 1860 aaPredicted RBP5.78□□□□□ -1.48
PTCD3-208ENST00000469585 C4orf33Q8N1A6 199 aa5.78□□□□□ -1.48
PTCD3-208ENST00000469585 L3MBTL4Q8NA19 623 aa5.78□□□□□ -1.48
PTCD3-208ENST00000469585 OR7G3Q8NG95 312 aa5.78□□□□□ -1.48
PTCD3-208ENST00000469585 HUS1BQ8NHY5 278 aa5.78□□□□□ -1.48
PTCD3-208ENST00000469585 UTP15Q8TED0 518 aaKnown RBP5.78□□□□□ -1.48
PTCD3-208ENST00000469585 DYDC1Q8WWB3 177 aa5.78□□□□□ -1.48
PTCD3-208ENST00000469585 TM4SF19Q96DZ7 209 aa5.78□□□□□ -1.48
PTCD3-208ENST00000469585 DTNBP1Q96EV8 351 aa5.78□□□□□ -1.48
PTCD3-208ENST00000469585 WDR34Q96EX3 536 aa5.78□□□□□ -1.48
PTCD3-208ENST00000469585 RBM18Q96H35 190 aaKnown RBP5.78□□□□□ -1.48
PTCD3-208ENST00000469585 THOC3Q96J01 351 aaKnown RBP5.78□□□□□ -1.48
PTCD3-208ENST00000469585 CNDP1Q96KN2 507 aa5.78□□□□□ -1.48
PTCD3-208ENST00000469585 DGAT2Q96PD7 388 aa5.78□□□□□ -1.48
PTCD3-208ENST00000469585 ZNF382Q96SR6 550 aa5.78□□□□□ -1.48
PTCD3-208ENST00000469585 CCT7Q99832 543 aa5.78□□□□□ -1.48
PTCD3-208ENST00000469585 CADM1Q9BY67 442 aaKnown RBP5.78□□□□□ -1.48
PTCD3-208ENST00000469585 TXLNGYQ9BZA5 131 aa5.78□□□□□ -1.48
PTCD3-208ENST00000469585 SHCBP1LQ9BZQ2 653 aa5.78□□□□□ -1.48
PTCD3-208ENST00000469585 LHPPQ9H008 270 aa5.78□□□□□ -1.48
PTCD3-208ENST00000469585 BRF2Q9HAW0 419 aa5.78□□□□□ -1.48
PTCD3-208ENST00000469585 LYRM4Q9HD34 91 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms