RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 TUBGCP3Q96CW5 907 aa4.92□□□□□ -1.62
PTCD3-207ENST00000467273 ZBED6CLQ96FA7 236 aaPredicted RBP4.92□□□□□ -1.62
PTCD3-207ENST00000467273 TRMT61AQ96FX7 289 aaKnown RBP4.92□□□□□ -1.62
PTCD3-207ENST00000467273 TIMP4Q99727 224 aa4.92□□□□□ -1.62
PTCD3-207ENST00000467273 WDR83Q9BRX9 315 aaKnown RBP4.92□□□□□ -1.62
PTCD3-207ENST00000467273 BEX2Q9BXY8 128 aa4.92□□□□□ -1.62
PTCD3-207ENST00000467273 ANGPTL4Q9BY76 406 aa4.92□□□□□ -1.62
PTCD3-207ENST00000467273 ACPTQ9BZG2 426 aa4.92□□□□□ -1.62
PTCD3-207ENST00000467273 TSPYL1Q9H0U9 437 aa4.92□□□□□ -1.62
PTCD3-207ENST00000467273 EHD1Q9H4M9 534 aa4.92□□□□□ -1.62
PTCD3-207ENST00000467273 LRRC40Q9H9A6 602 aa4.92□□□□□ -1.62
PTCD3-207ENST00000467273 ZBTB26Q9HCK0 441 aa4.92□□□□□ -1.62
PTCD3-207ENST00000467273 HOMER3Q9NSC5 361 aa4.92□□□□□ -1.62
PTCD3-207ENST00000467273 PPP1R14DQ9NXH3 145 aa4.92□□□□□ -1.62
PTCD3-207ENST00000467273 TUBA8Q9NY65 449 aaPredicted RBP4.92□□□□□ -1.62
PTCD3-207ENST00000467273 IL20Q9NYY1 176 aa4.92□□□□□ -1.62
PTCD3-207ENST00000467273 CNIH4Q9P003 139 aa4.92□□□□□ -1.62
PTCD3-207ENST00000467273 ZNF223Q9UK11 482 aaPredicted RBP4.92□□□□□ -1.62
PTCD3-207ENST00000467273 TMEM5Q9Y2B1 443 aa4.92□□□□□ -1.62
PTCD3-207ENST00000467273 CHTOPQ9Y3Y2 248 aaKnown RBP4.92□□□□□ -1.62
PTCD3-207ENST00000467273 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.92□□□□□ -1.625e-7■■□□□ 13.8
PTCD3-207ENST00000467273 CR1P17927 2039 aa4.92□□□□□ -1.62
PTCD3-207ENST00000467273 DOCK7Q96N67 2140 aa4.91□□□□□ -1.62
PTCD3-207ENST00000467273 SVEP1Q4LDE5 3571 aa4.91□□□□□ -1.62
PTCD3-207ENST00000467273 A0A0G2JMM0 328 aa4.91□□□□□ -1.62
PTCD3-207ENST00000467273 A0A1W2PPB8 328 aa4.91□□□□□ -1.62
PTCD3-207ENST00000467273 A0A1W2PRS3 328 aa4.91□□□□□ -1.62
PTCD3-207ENST00000467273 URADA6NGE7 173 aa4.91□□□□□ -1.62
PTCD3-207ENST00000467273 SERINC4A6NH21 518 aa4.91□□□□□ -1.62
PTCD3-207ENST00000467273 KIR3DP1A8MWS1 328 aa4.91□□□□□ -1.62
PTCD3-207ENST00000467273 H0YHG0 523 aa4.91□□□□□ -1.62
PTCD3-207ENST00000467273 H3BMM5 538 aa4.91□□□□□ -1.62
PTCD3-207ENST00000467273 GTPBP1O00178 669 aaKnown RBP4.91□□□□□ -1.62
PTCD3-207ENST00000467273 PSMD12O00232 456 aaPredicted RBP4.91□□□□□ -1.62
PTCD3-207ENST00000467273 CD3EAPO15446 510 aaKnown RBP4.91□□□□□ -1.62
PTCD3-207ENST00000467273 PSMD3O43242 534 aa4.91□□□□□ -1.62
PTCD3-207ENST00000467273 CHST10O43529 356 aa4.91□□□□□ -1.62
PTCD3-207ENST00000467273 PSTPIP1O43586 416 aa4.91□□□□□ -1.62
PTCD3-207ENST00000467273 B4GALT2O60909 372 aa4.91□□□□□ -1.62
PTCD3-207ENST00000467273 SLC16A8O95907 504 aa4.91□□□□□ -1.62
PTCD3-207ENST00000467273 SCGB1D1O95968 90 aa4.91□□□□□ -1.62
PTCD3-207ENST00000467273 GAS8O95995 478 aa4.91□□□□□ -1.62
PTCD3-207ENST00000467273 RPS3P23396 243 aaKnown RBP eCLIP4.91□□□□□ -1.62
PTCD3-207ENST00000467273 GATA3P23771 443 aa4.91□□□□□ -1.62
PTCD3-207ENST00000467273 RBL1P28749 1068 aa4.91□□□□□ -1.62
PTCD3-207ENST00000467273 PPIFP30405 207 aaKnown RBP4.91□□□□□ -1.62
PTCD3-207ENST00000467273 TLX1P31314 330 aaPredicted RBP4.91□□□□□ -1.62
PTCD3-207ENST00000467273 ZNF41P51814 821 aaPredicted RBP4.91□□□□□ -1.62
PTCD3-207ENST00000467273 PPP5CP53041 499 aa4.91□□□□□ -1.62
PTCD3-207ENST00000467273 RAD23AP54725 363 aa4.91□□□□□ -1.62
PTCD3-207ENST00000467273 HLXQ14774 488 aaPredicted RBP4.91□□□□□ -1.62
PTCD3-207ENST00000467273 POU6F1Q14863 301 aa4.91□□□□□ -1.62
PTCD3-207ENST00000467273 FASTKD1Q53R41 847 aaKnown RBP4.91□□□□□ -1.62
PTCD3-207ENST00000467273 XKR6Q5GH73 641 aa4.91□□□□□ -1.62
PTCD3-207ENST00000467273 UBAP2Q5T6F2 1119 aaKnown RBP4.91□□□□□ -1.62
PTCD3-207ENST00000467273 AADACL4Q5VUY2 407 aa4.91□□□□□ -1.62
PTCD3-207ENST00000467273 SLC22A10Q63ZE4 541 aa4.91□□□□□ -1.62
PTCD3-207ENST00000467273 PTRHD1Q6GMV3 140 aaKnown RBP4.91□□□□□ -1.62
PTCD3-207ENST00000467273 CAPN13Q6MZZ7 669 aaPredicted RBP4.91□□□□□ -1.62
PTCD3-207ENST00000467273 MRNIPQ6NTE8 343 aa4.91□□□□□ -1.62
PTCD3-207ENST00000467273 HSDL2Q6YN16 418 aa4.91□□□□□ -1.62
PTCD3-207ENST00000467273 DNM1P46Q6ZS02 220 aa4.91□□□□□ -1.62
PTCD3-207ENST00000467273 MICALCLQ6ZW33 695 aa4.91□□□□□ -1.62
PTCD3-207ENST00000467273 LDB1Q86U70 411 aaPredicted RBP4.91□□□□□ -1.62
PTCD3-207ENST00000467273 MEX3DQ86XN8 651 aaKnown RBP4.91□□□□□ -1.62
PTCD3-207ENST00000467273 CDKL3Q8IVW4 592 aaPredicted RBP4.91□□□□□ -1.62
PTCD3-207ENST00000467273 SLC15A3Q8IY34 581 aa4.91□□□□□ -1.62
PTCD3-207ENST00000467273 TBC1D19Q8N5T2 526 aa4.91□□□□□ -1.62
PTCD3-207ENST00000467273 C10orf53Q8N6V4 93 aa4.91□□□□□ -1.62
PTCD3-207ENST00000467273 ZNF611Q8N823 705 aa4.91□□□□□ -1.62
PTCD3-207ENST00000467273 OR5L2Q8NGL0 311 aa4.91□□□□□ -1.62
PTCD3-207ENST00000467273 RFWD2Q8NHY2 731 aa4.91□□□□□ -1.62
PTCD3-207ENST00000467273 LKAAEAR1Q8TD35 194 aa4.91□□□□□ -1.62
PTCD3-207ENST00000467273 PAQR8Q8TEZ7 354 aa4.91□□□□□ -1.62
PTCD3-207ENST00000467273 GRK7Q8WTQ7 553 aa4.91□□□□□ -1.62
PTCD3-207ENST00000467273 SLC13A3Q8WWT9 602 aa4.91□□□□□ -1.62
PTCD3-207ENST00000467273 DAZLQ92904 295 aaKnown RBP4.91□□□□□ -1.62
PTCD3-207ENST00000467273 NCLNQ969V3 563 aa4.91□□□□□ -1.62
PTCD3-207ENST00000467273 PIK3IP1Q96FE7 263 aa4.91□□□□□ -1.62
PTCD3-207ENST00000467273 CAPZA3Q96KX2 299 aa4.91□□□□□ -1.62
PTCD3-207ENST00000467273 MARK4Q96L34 752 aa4.91□□□□□ -1.62
PTCD3-207ENST00000467273 PRAP1Q96NZ9 151 aa4.91□□□□□ -1.62
PTCD3-207ENST00000467273 QRFPRQ96P65 431 aa4.91□□□□□ -1.62
PTCD3-207ENST00000467273 TXN2Q99757 166 aa4.91□□□□□ -1.62
PTCD3-207ENST00000467273 CITED2Q99967 270 aaPredicted RBP4.91□□□□□ -1.62
PTCD3-207ENST00000467273 SPXQ9BT56 116 aa4.91□□□□□ -1.62
PTCD3-207ENST00000467273 ALOXE3Q9BYJ1 711 aa4.91□□□□□ -1.62
PTCD3-207ENST00000467273 SLC25A32Q9H2D1 315 aa4.91□□□□□ -1.62
PTCD3-207ENST00000467273 COPS7BQ9H9Q2 264 aaPredicted RBP4.91□□□□□ -1.62
PTCD3-207ENST00000467273 SH2D2AQ9NP31 389 aa4.91□□□□□ -1.62
PTCD3-207ENST00000467273 ADAP2Q9NPF8 381 aa4.91□□□□□ -1.62
PTCD3-207ENST00000467273 AKIP1Q9NQ31 210 aa4.91□□□□□ -1.62
PTCD3-207ENST00000467273 GLRX2Q9NS18 164 aa4.91□□□□□ -1.62
PTCD3-207ENST00000467273 ANAPC5Q9UJX4 755 aa4.91□□□□□ -1.62
PTCD3-207ENST00000467273 NENFQ9UMX5 172 aa4.91□□□□□ -1.62
PTCD3-207ENST00000467273 USF3Q68DE3 2245 aa4.91□□□□□ -1.62
PTCD3-207ENST00000467273 ANK3Q12955 4377 aaKnown RBP4.9□□□□□ -1.62
PTCD3-207ENST00000467273 hCG_1818297A0A087WSY0 165 aa4.9□□□□□ -1.63
PTCD3-207ENST00000467273 C15orf38-AP3S2A0A0A6YYH1 394 aa4.9□□□□□ -1.63
PTCD3-207ENST00000467273 A0A0U1RQK1 487 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms