RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 J3KTA2 159 aa11.16□□□□□ -0.62
VPS16-206ENST00000466415 GTPBP1O00178 669 aaKnown RBP11.16□□□□□ -0.62
VPS16-206ENST00000466415 TNFRSF11BO00300 401 aa11.16□□□□□ -0.62
VPS16-206ENST00000466415 FRS3O43559 492 aa11.16□□□□□ -0.62
VPS16-206ENST00000466415 UGT2B11O75310 529 aa11.16□□□□□ -0.62
VPS16-206ENST00000466415 ITGA10O75578 1167 aa11.16□□□□□ -0.62
VPS16-206ENST00000466415 CYP7B1O75881 506 aa11.16□□□□□ -0.62
VPS16-206ENST00000466415 NADKO95544 446 aaPredicted RBP11.16□□□□□ -0.62
VPS16-206ENST00000466415 CSTAP01040 98 aa11.16□□□□□ -0.62
VPS16-206ENST00000466415 UBL4AP11441 157 aa11.16□□□□□ -0.62
VPS16-206ENST00000466415 NAGAP17050 411 aa11.16□□□□□ -0.62
VPS16-206ENST00000466415 ENDOUP21128 410 aaKnown RBP11.16□□□□□ -0.62
VPS16-206ENST00000466415 TBXA2RP21731 343 aa11.16□□□□□ -0.62
VPS16-206ENST00000466415 SSR4P51571 173 aa11.16□□□□□ -0.62
VPS16-206ENST00000466415 CDH12P55289 794 aa11.16□□□□□ -0.62
VPS16-206ENST00000466415 SMIM11AP58511 58 aa11.16□□□□□ -0.62
VPS16-206ENST00000466415 TAS2R41P59536 307 aa11.16□□□□□ -0.62
VPS16-206ENST00000466415 RPP38P78345 283 aaKnown RBP11.16□□□□□ -0.62
VPS16-206ENST00000466415 GANABQ14697 944 aaKnown RBP11.16□□□□□ -0.62
VPS16-206ENST00000466415 AP1ARQ63HQ0 302 aa11.16□□□□□ -0.62
VPS16-206ENST00000466415 OPN5Q6U736 354 aa11.16□□□□□ -0.62
VPS16-206ENST00000466415 ZNF550Q7Z398 422 aa11.16□□□□□ -0.62
VPS16-206ENST00000466415 COMTD1Q86VU5 262 aa11.16□□□□□ -0.62
VPS16-206ENST00000466415 RPS19BP1Q86WX3 136 aaKnown RBP11.16□□□□□ -0.62
VPS16-206ENST00000466415 HIPK1Q86Z02 1210 aa11.16□□□□□ -0.62
VPS16-206ENST00000466415 RBM45Q8IUH3 476 aaKnown RBP11.16□□□□□ -0.62
VPS16-206ENST00000466415 ZNF440Q8IYI8 595 aa11.16□□□□□ -0.62
VPS16-206ENST00000466415 SVOPLQ8N434 492 aa11.16□□□□□ -0.62
VPS16-206ENST00000466415 GATSQ8NAP1 163 aa11.16□□□□□ -0.62
VPS16-206ENST00000466415 CLEC1AQ8NC01 280 aa11.16□□□□□ -0.62
VPS16-206ENST00000466415 OR4D11Q8NGI4 311 aa11.16□□□□□ -0.62
VPS16-206ENST00000466415 OR6T1Q8NGN1 323 aa11.16□□□□□ -0.62
VPS16-206ENST00000466415 OR5M3Q8NGP4 307 aa11.16□□□□□ -0.62
VPS16-206ENST00000466415 OR4C3Q8NH37 302 aa11.16□□□□□ -0.62
VPS16-206ENST00000466415 OR5K1Q8NHB7 308 aa11.16□□□□□ -0.62
VPS16-206ENST00000466415 PHOSPHO1Q8TCT1 267 aa11.16□□□□□ -0.62
VPS16-206ENST00000466415 ADAMTS17Q8TE56 1095 aa11.16□□□□□ -0.62
VPS16-206ENST00000466415 APOBEC4Q8WW27 367 aaKnown RBP11.16□□□□□ -0.62
VPS16-206ENST00000466415 NRG4Q8WWG1 115 aa11.16□□□□□ -0.62
VPS16-206ENST00000466415 ASB15Q8WXK1 588 aa11.16□□□□□ -0.62
VPS16-206ENST00000466415 PRRC1Q96M27 445 aa11.16□□□□□ -0.62
VPS16-206ENST00000466415 RASL10BQ96S79 203 aa11.16□□□□□ -0.62
VPS16-206ENST00000466415 MCHR1Q99705 422 aa11.16□□□□□ -0.62
VPS16-206ENST00000466415 CIB1Q99828 191 aa11.16□□□□□ -0.62
VPS16-206ENST00000466415 FNDC11Q9BVV2 318 aa11.16□□□□□ -0.62
VPS16-206ENST00000466415 CDCP1Q9H5V8 836 aa11.16□□□□□ -0.62
VPS16-206ENST00000466415 RYDENQ9NUL5 291 aaKnown RBP11.16□□□□□ -0.62
VPS16-206ENST00000466415 RLIMQ9NVW2 624 aa11.16□□□□□ -0.62
VPS16-206ENST00000466415 FLRT3Q9NZU0 649 aa11.16□□□□□ -0.62
VPS16-206ENST00000466415 TESQ9UGI8 421 aaKnown RBP11.16□□□□□ -0.62
VPS16-206ENST00000466415 KCNE5Q9UJ90 142 aa11.16□□□□□ -0.62
VPS16-206ENST00000466415 OAZ3Q9UMX2 235 aa11.16□□□□□ -0.62
VPS16-206ENST00000466415 YARS2Q9Y2Z4 477 aaKnown RBP11.16□□□□□ -0.62
VPS16-206ENST00000466415 U3KQV3 271 aa11.16□□□□□ -0.62
VPS16-206ENST00000466415 SPEGQ15772 3267 aa11.15□□□□□ -0.62
VPS16-206ENST00000466415 A0A1W2PQD3 144 aa11.15□□□□□ -0.62
VPS16-206ENST00000466415 PRAMEF25A6NGN4 478 aa11.15□□□□□ -0.62
VPS16-206ENST00000466415 TMEM200CA6NKL6 621 aa11.15□□□□□ -0.62
VPS16-206ENST00000466415 CPSF4LA6NMK7 179 aaKnown RBP11.15□□□□□ -0.62
VPS16-206ENST00000466415 G3V2T6 193 aa11.15□□□□□ -0.62
VPS16-206ENST00000466415 MASP2O00187 686 aa11.15□□□□□ -0.62
VPS16-206ENST00000466415 TP53I11O14683 189 aa11.15□□□□□ -0.62
VPS16-206ENST00000466415 SCO2O43819 266 aa11.15□□□□□ -0.62
VPS16-206ENST00000466415 DPM1O60762 260 aa11.15□□□□□ -0.62
VPS16-206ENST00000466415 GADD45GO95257 159 aa11.15□□□□□ -0.62
VPS16-206ENST00000466415 EPPINO95925 133 aa11.15□□□□□ -0.62
VPS16-206ENST00000466415 NGFRP08138 427 aa11.15□□□□□ -0.62
VPS16-206ENST00000466415 FBXO45P0C2W1 286 aa11.15□□□□□ -0.62
VPS16-206ENST00000466415 UBTFL6P0CB48 400 aaPredicted RBP11.15□□□□□ -0.62
VPS16-206ENST00000466415 UQCRBP14927 111 aa11.15□□□□□ -0.62
VPS16-206ENST00000466415 SPINK2P20155 84 aa11.15□□□□□ -0.62
VPS16-206ENST00000466415 FPR1P21462 350 aa11.15□□□□□ -0.62
VPS16-206ENST00000466415 ITGA3P26006 1051 aa11.15□□□□□ -0.62
VPS16-206ENST00000466415 DNAJA1P31689 397 aaKnown RBP11.15□□□□□ -0.62
VPS16-206ENST00000466415 EVI2BP34910 448 aa11.15□□□□□ -0.62
VPS16-206ENST00000466415 GCKP35557 465 aa11.15□□□□□ -0.62
VPS16-206ENST00000466415 CCR4P51679 360 aa11.15□□□□□ -0.62
VPS16-206ENST00000466415 RRADP55042 308 aa11.15□□□□□ -0.62
VPS16-206ENST00000466415 FBXW4P57775 412 aa11.15□□□□□ -0.62
VPS16-206ENST00000466415 CHAF1BQ13112 559 aa11.15□□□□□ -0.62
VPS16-206ENST00000466415 AIMP2Q13155 320 aaKnown RBP11.15□□□□□ -0.62
VPS16-206ENST00000466415 GK3PQ14409 553 aa11.15□□□□□ -0.62
VPS16-206ENST00000466415 FGD3Q5JSP0 725 aa11.15□□□□□ -0.62
VPS16-206ENST00000466415 DCAF10Q5QP82 559 aa11.15□□□□□ -0.62
VPS16-206ENST00000466415 FCRLBQ6BAA4 426 aa11.15□□□□□ -0.62
VPS16-206ENST00000466415 JMJD6Q6NYC1 403 aaPredicted RBP11.15□□□□□ -0.62
VPS16-206ENST00000466415 ZBTB49Q6ZSB9 765 aa11.15□□□□□ -0.62
VPS16-206ENST00000466415 NUP54Q7Z3B4 507 aa11.15□□□□□ -0.62
VPS16-206ENST00000466415 ZDHHC13Q8IUH4 622 aa11.15□□□□□ -0.62
VPS16-206ENST00000466415 GRAMD2AQ8IUY3 354 aa11.15□□□□□ -0.62
VPS16-206ENST00000466415 DND1Q8IYX4 353 aaKnown RBP11.15□□□□□ -0.62
VPS16-206ENST00000466415 TMEM156Q8N614 296 aa11.15□□□□□ -0.62
VPS16-206ENST00000466415 SIRT6Q8N6T7 355 aa11.15□□□□□ -0.62
VPS16-206ENST00000466415 PIK3C3Q8NEB9 887 aa11.15□□□□□ -0.62
VPS16-206ENST00000466415 PHF10Q8WUB8 498 aaKnown RBP11.15□□□□□ -0.62
VPS16-206ENST00000466415 KCNE4Q8WWG9 221 aa11.15□□□□□ -0.62
VPS16-206ENST00000466415 CNOT9Q92600 299 aaKnown RBP11.15□□□□□ -0.62
VPS16-206ENST00000466415 SLC35B4Q969S0 331 aa11.15□□□□□ -0.62
VPS16-206ENST00000466415 FAM122AQ96E09 287 aa11.15□□□□□ -0.62
VPS16-206ENST00000466415 SPACA9Q96E40 222 aaPredicted RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms