RNA–Protein interactions for RNA: ENST00000464616.6

GARNL3-213, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-213ENST00000464616 HACD2Q6Y1H2 254 aa2.4□□□□□ -2.03
GARNL3-213ENST00000464616 HSD11B1LQ7Z5J1 315 aa2.4□□□□□ -2.03
GARNL3-213ENST00000464616 LHFPL4Q7Z7J7 247 aa2.4□□□□□ -2.03
GARNL3-213ENST00000464616 HIPK1Q86Z02 1210 aa2.4□□□□□ -2.03
GARNL3-213ENST00000464616 HSCBQ8IWL3 235 aa2.4□□□□□ -2.03
GARNL3-213ENST00000464616 DHRSXQ8N5I4 330 aa2.4□□□□□ -2.03
GARNL3-213ENST00000464616 CLDN19Q8N6F1 224 aa2.4□□□□□ -2.03
GARNL3-213ENST00000464616 OR10A7Q8NGE5 316 aa2.4□□□□□ -2.03
GARNL3-213ENST00000464616 ADIPOR1Q96A54 375 aa2.4□□□□□ -2.03
GARNL3-213ENST00000464616 RAB7BQ96AH8 199 aa2.4□□□□□ -2.03
GARNL3-213ENST00000464616 TMEM80Q96HE8 168 aa2.4□□□□□ -2.03
GARNL3-213ENST00000464616 C7orf34Q96L11 122 aa2.4□□□□□ -2.03
GARNL3-213ENST00000464616 ZIM3Q96PE6 472 aa2.4□□□□□ -2.03
GARNL3-213ENST00000464616 SLC39A3Q9BRY0 314 aa2.4□□□□□ -2.03
GARNL3-213ENST00000464616 TUBGCP2Q9BSJ2 902 aa2.4□□□□□ -2.03
GARNL3-213ENST00000464616 CRNKL1Q9BZJ0 848 aaKnown RBP2.4□□□□□ -2.03
GARNL3-213ENST00000464616 SLC25A51Q9H1U9 297 aa2.4□□□□□ -2.03
GARNL3-213ENST00000464616 DHX33Q9H6R0 707 aaKnown RBP2.4□□□□□ -2.03
GARNL3-213ENST00000464616 TMOD2Q9NZR1 351 aa2.4□□□□□ -2.03
GARNL3-213ENST00000464616 RNF14Q9UBS8 474 aa2.4□□□□□ -2.03
GARNL3-213ENST00000464616 TMCC3Q9ULS5 477 aa2.4□□□□□ -2.03
GARNL3-213ENST00000464616 NPIPA1Q9UND3 350 aa2.4□□□□□ -2.03
GARNL3-213ENST00000464616 RPH3ALQ9UNE2 315 aa2.4□□□□□ -2.03
GARNL3-213ENST00000464616 SAMD4AQ9UPU9 718 aaKnown RBP2.4□□□□□ -2.03
GARNL3-213ENST00000464616 WDR45Q9Y484 360 aa2.4□□□□□ -2.03
GARNL3-213ENST00000464616 USP6P35125 1406 aa2.4□□□□□ -2.03
GARNL3-213ENST00000464616 ZSCAN5CA6NGD5 496 aaPredicted RBP2.39□□□□□ -2.03
GARNL3-213ENST00000464616 OR6C65A6NJZ3 312 aa2.39□□□□□ -2.03
GARNL3-213ENST00000464616 RPL37AP8A6NKH3 93 aa2.39□□□□□ -2.03
GARNL3-213ENST00000464616 EFCAB7A8K855 629 aa2.39□□□□□ -2.03
GARNL3-213ENST00000464616 G3V3Y1 287 aa2.39□□□□□ -2.03
GARNL3-213ENST00000464616 H0YCG3 227 aa2.39□□□□□ -2.03
GARNL3-213ENST00000464616 SLC17A2O00624 439 aa2.39□□□□□ -2.03
GARNL3-213ENST00000464616 IMPA2O14732 288 aa2.39□□□□□ -2.03
GARNL3-213ENST00000464616 CASKO14936 926 aa2.39□□□□□ -2.03
GARNL3-213ENST00000464616 GPAA1O43292 621 aa2.39□□□□□ -2.03
GARNL3-213ENST00000464616 DUX1O43812 170 aa2.39□□□□□ -2.03
GARNL3-213ENST00000464616 LANCL1O43813 399 aa2.39□□□□□ -2.03
GARNL3-213ENST00000464616 N4BP1O75113 896 aaKnown RBP2.39□□□□□ -2.03
GARNL3-213ENST00000464616 UGT2B17O75795 530 aa2.39□□□□□ -2.03
GARNL3-213ENST00000464616 KIAA0754O94854 1291 aa2.39□□□□□ -2.03
GARNL3-213ENST00000464616 JCHAINP01591 159 aa2.39□□□□□ -2.03
GARNL3-213ENST00000464616 CD55P08174 381 aa2.39□□□□□ -2.03
GARNL3-213ENST00000464616 H2BFMP0C1H6 154 aa2.39□□□□□ -2.03
GARNL3-213ENST00000464616 DBTP11182 482 aaKnown RBP2.39□□□□□ -2.03
GARNL3-213ENST00000464616 PGCP20142 388 aa2.39□□□□□ -2.03
GARNL3-213ENST00000464616 TBXA2RP21731 343 aa2.39□□□□□ -2.03
GARNL3-213ENST00000464616 YWHABP31946 246 aaKnown RBP2.39□□□□□ -2.03
GARNL3-213ENST00000464616 CYLC1P35663 651 aaPredicted RBP2.39□□□□□ -2.03
GARNL3-213ENST00000464616 MAGEA9P43362 315 aa2.39□□□□□ -2.03
GARNL3-213ENST00000464616 AP3M2P53677 418 aa2.39□□□□□ -2.03
GARNL3-213ENST00000464616 RAG2P55895 527 aa2.39□□□□□ -2.03
GARNL3-213ENST00000464616 LYZP61626 148 aa2.39□□□□□ -2.03
GARNL3-213ENST00000464616 SPIBQ01892 262 aa2.39□□□□□ -2.03
GARNL3-213ENST00000464616 OC90Q02509 493 aaPredicted RBP2.39□□□□□ -2.03
GARNL3-213ENST00000464616 PLOD1Q02809 727 aaPredicted RBP2.39□□□□□ -2.03
GARNL3-213ENST00000464616 CYLC2Q14093 348 aaPredicted RBP2.39□□□□□ -2.03
GARNL3-213ENST00000464616 GANABQ14697 944 aaKnown RBP2.39□□□□□ -2.03
GARNL3-213ENST00000464616 PDK3Q15120 406 aa2.39□□□□□ -2.03
GARNL3-213ENST00000464616 ZKSCAN8Q15776 578 aaPredicted RBP2.39□□□□□ -2.03
GARNL3-213ENST00000464616 NADK2Q4G0N4 442 aa2.39□□□□□ -2.03
GARNL3-213ENST00000464616 SEL1L2Q5TEA6 688 aa2.39□□□□□ -2.03
GARNL3-213ENST00000464616 LEMD1Q68G75 181 aa2.39□□□□□ -2.03
GARNL3-213ENST00000464616 TMEM225Q6GV28 225 aa2.39□□□□□ -2.03
GARNL3-213ENST00000464616 SLC25A24Q6NUK1 477 aa2.39□□□□□ -2.03
GARNL3-213ENST00000464616 FAHD2BQ6P2I3 314 aaPredicted RBP2.39□□□□□ -2.03
GARNL3-213ENST00000464616 BLOC1S2Q6QNY1 142 aa2.39□□□□□ -2.03
GARNL3-213ENST00000464616 ISLR2Q6UXK2 745 aa2.39□□□□□ -2.03
GARNL3-213ENST00000464616 ADAMTSL5Q6ZMM2 481 aa2.39□□□□□ -2.03
GARNL3-213ENST00000464616 APTXQ7Z2E3 356 aaKnown RBP2.39□□□□□ -2.03
GARNL3-213ENST00000464616 TIPARPQ7Z3E1 657 aaKnown RBP2.39□□□□□ -2.03
GARNL3-213ENST00000464616 CCDC50Q8IVM0 306 aa2.39□□□□□ -2.03
GARNL3-213ENST00000464616 MCOLN2Q8IZK6 566 aa2.39□□□□□ -2.03
GARNL3-213ENST00000464616 BPIFB2Q8N4F0 458 aa2.39□□□□□ -2.03
GARNL3-213ENST00000464616 TRMT10AQ8TBZ6 339 aaKnown RBP2.39□□□□□ -2.03
GARNL3-213ENST00000464616 AENQ8WTP8 325 aaKnown RBP2.39□□□□□ -2.03
GARNL3-213ENST00000464616 DTNBP1Q96EV8 351 aa2.39□□□□□ -2.03
GARNL3-213ENST00000464616 DNAJA3Q96EY1 480 aa2.39□□□□□ -2.03
GARNL3-213ENST00000464616 FAHD2AQ96GK7 314 aa2.39□□□□□ -2.03
GARNL3-213ENST00000464616 MCCC1Q96RQ3 725 aaPredicted RBP2.39□□□□□ -2.03
GARNL3-213ENST00000464616 ZNF385DQ9H6B1 395 aa2.39□□□□□ -2.03
GARNL3-213ENST00000464616 ADGRL4Q9HBW9 690 aa2.39□□□□□ -2.03
GARNL3-213ENST00000464616 ABCD2Q9UBJ2 740 aa2.39□□□□□ -2.03
GARNL3-213ENST00000464616 DUSP12Q9UNI6 340 aa2.39□□□□□ -2.03
GARNL3-213ENST00000464616 IKBKGQ9Y6K9 419 aa2.39□□□□□ -2.03
GARNL3-213ENST00000464616 KANK1Q14678 1352 aa2.38□□□□□ -2.03
GARNL3-213ENST00000464616 PARD3Q8TEW0 1356 aa2.38□□□□□ -2.03
GARNL3-213ENST00000464616 SYNJ2BP-COX16A0A087WUM0 186 aa2.38□□□□□ -2.03
GARNL3-213ENST00000464616 C15orf38-AP3S2A0A0A6YYH1 394 aa2.38□□□□□ -2.03
GARNL3-213ENST00000464616 FAM220BPB1ANY3 271 aa2.38□□□□□ -2.03
GARNL3-213ENST00000464616 PHF1O43189 567 aaPredicted RBP2.38□□□□□ -2.03
GARNL3-213ENST00000464616 BCAS1O75363 584 aaPredicted RBP2.38□□□□□ -2.03
GARNL3-213ENST00000464616 WNT2P09544 360 aa2.38□□□□□ -2.03
GARNL3-213ENST00000464616 HSMCR30P0CW71 290 aa2.38□□□□□ -2.03
GARNL3-213ENST00000464616 PGAM2P15259 253 aa2.38□□□□□ -2.03
GARNL3-213ENST00000464616 RPA2P15927 270 aa2.38□□□□□ -2.03
GARNL3-213ENST00000464616 ACVR1BP36896 505 aa2.38□□□□□ -2.03
GARNL3-213ENST00000464616 ALDH3B2P48448 385 aa2.38□□□□□ -2.03
GARNL3-213ENST00000464616 DHPSP49366 369 aaPredicted RBP2.38□□□□□ -2.03
GARNL3-213ENST00000464616 PPT1P50897 306 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms