RNA–Protein interactions for RNA: ENST00000464552.1

PRKD3-206, Transcript of protein kinase D3, humanhuman

TSL 2

Gene PRKD3, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-206ENST00000464552 FER1L5A0AVI2 2057 aa3.34□□□□□ -1.88
PRKD3-206ENST00000464552 EP300Q09472 2414 aaPredicted RBP3.33□□□□□ -1.88
PRKD3-206ENST00000464552 ATG2BQ96BY7 2078 aa3.33□□□□□ -1.88
PRKD3-206ENST00000464552 IGHV1OR15-9A0A0B4J2B8 117 aa3.33□□□□□ -1.88
PRKD3-206ENST00000464552 FAM170AA1A519 330 aa3.33□□□□□ -1.88
PRKD3-206ENST00000464552 FAM47DPA6NHR8 397 aa3.33□□□□□ -1.88
PRKD3-206ENST00000464552 TMEM150CB9EJG8 249 aa3.33□□□□□ -1.88
PRKD3-206ENST00000464552 GOLGA8SH3BPF8 625 aa3.33□□□□□ -1.88
PRKD3-206ENST00000464552 RTCAO00442 366 aaKnown RBP3.33□□□□□ -1.88
PRKD3-206ENST00000464552 TNFSF12O43508 249 aa3.33□□□□□ -1.88
PRKD3-206ENST00000464552 DIAPH2O60879 1101 aa3.33□□□□□ -1.88
PRKD3-206ENST00000464552 GRAP2O75791 330 aa3.33□□□□□ -1.88
PRKD3-206ENST00000464552 ADCY5O95622 1261 aa3.33□□□□□ -1.88
PRKD3-206ENST00000464552 SEMA4FO95754 770 aa3.33□□□□□ -1.88
PRKD3-206ENST00000464552 CALCAP01258 141 aa3.33□□□□□ -1.88
PRKD3-206ENST00000464552 IL1BP01584 269 aa3.33□□□□□ -1.88
PRKD3-206ENST00000464552 RHOCP08134 193 aa3.33□□□□□ -1.88
PRKD3-206ENST00000464552 CCDC172P0C7W6 258 aa3.33□□□□□ -1.88
PRKD3-206ENST00000464552 TCF4P15884 667 aa3.33□□□□□ -1.88
PRKD3-206ENST00000464552 PDGFRAP16234 1089 aa3.33□□□□□ -1.88
PRKD3-206ENST00000464552 PTMSP20962 102 aa3.33□□□□□ -1.88
PRKD3-206ENST00000464552 GIFP27352 417 aa3.33□□□□□ -1.88
PRKD3-206ENST00000464552 CSKP41240 450 aa3.33□□□□□ -1.88
PRKD3-206ENST00000464552 MATKP42679 507 aa3.33□□□□□ -1.88
PRKD3-206ENST00000464552 PSMD8P48556 350 aa3.33□□□□□ -1.88
PRKD3-206ENST00000464552 ATP4BP51164 291 aa3.33□□□□□ -1.88
PRKD3-206ENST00000464552 KRT83P78385 493 aa3.33□□□□□ -1.88
PRKD3-206ENST00000464552 MYL5Q02045 173 aa3.33□□□□□ -1.88
PRKD3-206ENST00000464552 IL10RBQ08334 325 aa3.33□□□□□ -1.88
PRKD3-206ENST00000464552 CDO1Q16878 200 aa3.33□□□□□ -1.88
PRKD3-206ENST00000464552 SPANXN4Q5MJ08 99 aa3.33□□□□□ -1.88
PRKD3-206ENST00000464552 BRMS1LQ5PSV4 323 aa3.33□□□□□ -1.88
PRKD3-206ENST00000464552 CCDC183Q5T5S1 534 aa3.33□□□□□ -1.88
PRKD3-206ENST00000464552 FAM46CQ5VWP2 391 aa3.33□□□□□ -1.88
PRKD3-206ENST00000464552 FAM166AQ6J272 317 aa3.33□□□□□ -1.88
PRKD3-206ENST00000464552 RPUSD3Q6P087 351 aaKnown RBP3.33□□□□□ -1.88
PRKD3-206ENST00000464552 PMF1Q6P1K2 205 aa3.33□□□□□ -1.88
PRKD3-206ENST00000464552 RFWD3Q6PCD5 774 aa3.33□□□□□ -1.88
PRKD3-206ENST00000464552 MACC1Q6ZN28 852 aa3.33□□□□□ -1.88
PRKD3-206ENST00000464552 FAM183BPQ6ZVS7 135 aa3.33□□□□□ -1.88
PRKD3-206ENST00000464552 ERN2Q76MJ5 926 aaKnown RBP3.33□□□□□ -1.88
PRKD3-206ENST00000464552 ERICH1Q86X53 443 aa3.33□□□□□ -1.88
PRKD3-206ENST00000464552 ZNF677Q86XU0 584 aa3.33□□□□□ -1.88
PRKD3-206ENST00000464552 ZNF584Q8IVC4 421 aa3.33□□□□□ -1.88
PRKD3-206ENST00000464552 DEFB106AQ8N104 65 aa3.33□□□□□ -1.88
PRKD3-206ENST00000464552 CCDC185Q8N715 623 aa3.33□□□□□ -1.88
PRKD3-206ENST00000464552 DEFB124Q8NES8 71 aa3.33□□□□□ -1.88
PRKD3-206ENST00000464552 OR2T3Q8NH03 318 aa3.33□□□□□ -1.88
PRKD3-206ENST00000464552 SETD7Q8WTS6 366 aaKnown RBP3.33□□□□□ -1.88
PRKD3-206ENST00000464552 ZNF606Q8WXB4 792 aa3.33□□□□□ -1.88
PRKD3-206ENST00000464552 OR8D1Q8WZ84 308 aa3.33□□□□□ -1.88
PRKD3-206ENST00000464552 SHC3Q92529 594 aa3.33□□□□□ -1.88
PRKD3-206ENST00000464552 GABRG3Q99928 467 aa3.33□□□□□ -1.88
PRKD3-206ENST00000464552 KATNB1Q9BVA0 655 aa3.33□□□□□ -1.88
PRKD3-206ENST00000464552 NUP58Q9BVL2 599 aa3.33□□□□□ -1.88
PRKD3-206ENST00000464552 PAPOLGQ9BWT3 736 aaKnown RBP3.33□□□□□ -1.88
PRKD3-206ENST00000464552 GPR174Q9BXC1 333 aa3.33□□□□□ -1.88
PRKD3-206ENST00000464552 OCR1Q9BZK8 76 aa3.33□□□□□ -1.88
PRKD3-206ENST00000464552 SGK2Q9HBY8 427 aa3.33□□□□□ -1.88
PRKD3-206ENST00000464552 PHPT1Q9NRX4 125 aaPredicted RBP3.33□□□□□ -1.88
PRKD3-206ENST00000464552 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.33□□□□□ -1.88
PRKD3-206ENST00000464552 SNX7Q9UNH6 387 aa3.33□□□□□ -1.88
PRKD3-206ENST00000464552 COLEC10Q9Y6Z7 277 aa3.33□□□□□ -1.88
PRKD3-206ENST00000464552 SPAG17Q6Q759 2223 aa3.33□□□□□ -1.88
PRKD3-206ENST00000464552 OTOGLQ3ZCN5 2332 aa3.33□□□□□ -1.88
PRKD3-206ENST00000464552 THADAQ6YHU6 1953 aa3.32□□□□□ -1.88
PRKD3-206ENST00000464552 USP34Q70CQ2 3546 aa3.32□□□□□ -1.88
PRKD3-206ENST00000464552 GPR179Q6PRD1 2367 aa3.32□□□□□ -1.88
PRKD3-206ENST00000464552 TRAV18A0A075B6X5 111 aa3.32□□□□□ -1.88
PRKD3-206ENST00000464552 GOLGA6L7A0A1B0GV03 622 aa3.32□□□□□ -1.88
PRKD3-206ENST00000464552 WASH3PC4AMC7 463 aa3.32□□□□□ -1.88
PRKD3-206ENST00000464552 GOLGA6L19H0YKK7 550 aa3.32□□□□□ -1.88
PRKD3-206ENST00000464552 PHOX2AO14813 284 aa3.32□□□□□ -1.88
PRKD3-206ENST00000464552 PRAF2O60831 178 aa3.32□□□□□ -1.88
PRKD3-206ENST00000464552 LRCH4O75427 683 aa3.32□□□□□ -1.88
PRKD3-206ENST00000464552 CLDN11O75508 207 aa3.32□□□□□ -1.88
PRKD3-206ENST00000464552 LSM8O95777 96 aaKnown RBP3.32□□□□□ -1.88
PRKD3-206ENST00000464552 CALB1P05937 261 aa3.32□□□□□ -1.88
PRKD3-206ENST00000464552 TPM3P06753 285 aa3.32□□□□□ -1.88
PRKD3-206ENST00000464552 MELTFP08582 738 aa3.32□□□□□ -1.88
PRKD3-206ENST00000464552 SERPINF2P08697 491 aa3.32□□□□□ -1.88
PRKD3-206ENST00000464552 PNMA6AP0CW24 399 aaPredicted RBP3.32□□□□□ -1.88
PRKD3-206ENST00000464552 UCHL3P15374 230 aa3.32□□□□□ -1.88
PRKD3-206ENST00000464552 CYP11B1P15538 503 aa3.32□□□□□ -1.88
PRKD3-206ENST00000464552 SDC4P31431 198 aa3.32□□□□□ -1.88
PRKD3-206ENST00000464552 CD70P32970 193 aa3.32□□□□□ -1.88
PRKD3-206ENST00000464552 NSFP46459 744 aaKnown RBP3.32□□□□□ -1.88
PRKD3-206ENST00000464552 NUMBP49757 651 aa3.32□□□□□ -1.88
PRKD3-206ENST00000464552 TPMTP51580 245 aa3.32□□□□□ -1.88
PRKD3-206ENST00000464552 NDUFV3P56181 108 aaKnown RBP3.32□□□□□ -1.88
PRKD3-206ENST00000464552 POLR2FP61218 127 aaKnown RBP3.32□□□□□ -1.88
PRKD3-206ENST00000464552 ABCE1P61221 599 aaKnown RBP3.32□□□□□ -1.88
PRKD3-206ENST00000464552 RPS24P62847 133 aaKnown RBP3.32□□□□□ -1.88
PRKD3-206ENST00000464552 SRPXP78539 464 aa3.32□□□□□ -1.88
PRKD3-206ENST00000464552 UBXN1Q04323 297 aa3.32□□□□□ -1.88
PRKD3-206ENST00000464552 ZNF273Q14593 569 aa3.32□□□□□ -1.88
PRKD3-206ENST00000464552 CST6Q15828 149 aa3.32□□□□□ -1.88
PRKD3-206ENST00000464552 PTPN20Q4JDL3 420 aa3.32□□□□□ -1.88
PRKD3-206ENST00000464552 EIPR1Q53HC9 387 aa3.32□□□□□ -1.88
PRKD3-206ENST00000464552 FAM133BQ5BKY9 247 aaKnown RBP3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms