RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 C4orf36Q96KX1 117 aa8.53□□□□□ -1.04
HPS4-208ENST00000464362 PRRC1Q96M27 445 aa8.53□□□□□ -1.04
HPS4-208ENST00000464362 OR7D2Q96RA2 312 aa8.53□□□□□ -1.04
HPS4-208ENST00000464362 CSF3RQ99062 836 aa8.53□□□□□ -1.04
HPS4-208ENST00000464362 C11orf54Q9H0W9 315 aaPredicted RBP8.53□□□□□ -1.04
HPS4-208ENST00000464362 GLIPR2Q9H4G4 154 aa8.53□□□□□ -1.04
HPS4-208ENST00000464362 MTHFD2LQ9H903 347 aaPredicted RBP8.53□□□□□ -1.04
HPS4-208ENST00000464362 PRTFDC1Q9NRG1 225 aa8.53□□□□□ -1.04
HPS4-208ENST00000464362 CNOT2Q9NZN8 540 aaKnown RBP8.53□□□□□ -1.04
HPS4-208ENST00000464362 CDC40O60508 579 aaKnown RBP eCLIP8.52□□□□□ -1.04
HPS4-208ENST00000464362 CSO75390 466 aaKnown RBP8.52□□□□□ -1.04
HPS4-208ENST00000464362 RDH16O75452 317 aa8.52□□□□□ -1.04
HPS4-208ENST00000464362 GATBO75879 557 aaKnown RBP8.52□□□□□ -1.04
HPS4-208ENST00000464362 IGLV3-27P01718 113 aa8.52□□□□□ -1.04
HPS4-208ENST00000464362 CA3P07451 260 aa8.52□□□□□ -1.04
HPS4-208ENST00000464362 SDHBP21912 280 aa8.52□□□□□ -1.04
HPS4-208ENST00000464362 MMP11P24347 488 aa8.52□□□□□ -1.04
HPS4-208ENST00000464362 ELAVL4P26378 380 aaKnown RBP8.52□□□□□ -1.04
HPS4-208ENST00000464362 OR3A3P47888 321 aa8.52□□□□□ -1.04
HPS4-208ENST00000464362 OR3A2P47893 321 aa8.52□□□□□ -1.04
HPS4-208ENST00000464362 PXNP49023 591 aaPredicted RBP8.52□□□□□ -1.04
HPS4-208ENST00000464362 KCNJ10P78508 379 aa8.52□□□□□ -1.04
HPS4-208ENST00000464362 ACSM3Q53FZ2 586 aa8.52□□□□□ -1.04
HPS4-208ENST00000464362 ZCCHC12Q6PEW1 402 aa8.52□□□□□ -1.04
HPS4-208ENST00000464362 C10orf111Q8N326 155 aa8.52□□□□□ -1.04
HPS4-208ENST00000464362 DYNC2LI1Q8TCX1 351 aa8.52□□□□□ -1.04
HPS4-208ENST00000464362 LMX1AQ8TE12 382 aa8.52□□□□□ -1.04
HPS4-208ENST00000464362 TMEM239Q8WW34 195 aa8.52□□□□□ -1.04
HPS4-208ENST00000464362 WDR92Q96MX6 357 aa8.52□□□□□ -1.04
HPS4-208ENST00000464362 THAP7Q9BT49 309 aaPredicted RBP8.52□□□□□ -1.04
HPS4-208ENST00000464362 ACER3Q9NUN7 267 aa8.52□□□□□ -1.04
HPS4-208ENST00000464362 WSB2Q9NYS7 404 aaPredicted RBP8.52□□□□□ -1.04
HPS4-208ENST00000464362 TMEFF2Q9UIK5 374 aaPredicted RBP8.52□□□□□ -1.04
HPS4-208ENST00000464362 CYP8B1Q9UNU6 501 aa8.52□□□□□ -1.04
HPS4-208ENST00000464362 SH2B3Q9UQQ2 575 aa8.52□□□□□ -1.04
HPS4-208ENST00000464362 ATG4BQ9Y4P1 393 aa8.52□□□□□ -1.04
HPS4-208ENST00000464362 SSC5DA1L4H1 1573 aa8.52□□□□□ -1.05
HPS4-208ENST00000464362 OR14I1A6ND48 311 aa8.52□□□□□ -1.05
HPS4-208ENST00000464362 SGK494L7N484 410 aa8.52□□□□□ -1.05
HPS4-208ENST00000464362 SLC19A2O60779 497 aa8.52□□□□□ -1.05
HPS4-208ENST00000464362 GPX5O75715 221 aa8.52□□□□□ -1.05
HPS4-208ENST00000464362 RBBP9O75884 186 aa8.52□□□□□ -1.05
HPS4-208ENST00000464362 AIFM1O95831 613 aa8.52□□□□□ -1.05
HPS4-208ENST00000464362 APOC3P02656 99 aa8.52□□□□□ -1.05
HPS4-208ENST00000464362 BMP1P13497 986 aa8.52□□□□□ -1.05
HPS4-208ENST00000464362 SHC1P29353 583 aa8.52□□□□□ -1.05
HPS4-208ENST00000464362 BMPR1AP36894 532 aa8.52□□□□□ -1.05
HPS4-208ENST00000464362 PRDX1Q06830 199 aaKnown RBP8.52□□□□□ -1.05
HPS4-208ENST00000464362 TMEM35AQ53FP2 167 aa8.52□□□□□ -1.05
HPS4-208ENST00000464362 ZMAT1Q5H9K5 638 aa8.52□□□□□ -1.05
HPS4-208ENST00000464362 XAF1Q6GPH4 301 aa8.52□□□□□ -1.05
HPS4-208ENST00000464362 LCTLQ6UWM7 567 aa8.52□□□□□ -1.05
HPS4-208ENST00000464362 GDPGP1Q6ZNW5 385 aa8.52□□□□□ -1.05
HPS4-208ENST00000464362 GDPD3Q7L5L3 318 aa8.52□□□□□ -1.05
HPS4-208ENST00000464362 GPAT4Q86UL3 456 aa8.52□□□□□ -1.05
HPS4-208ENST00000464362 SLC16A11Q8NCK7 471 aa8.52□□□□□ -1.05
HPS4-208ENST00000464362 OR2L3Q8NG85 312 aa8.52□□□□□ -1.05
HPS4-208ENST00000464362 OR13C2Q8NGS9 318 aa8.52□□□□□ -1.05
HPS4-208ENST00000464362 OR2L2Q8NH16 312 aa8.52□□□□□ -1.05
HPS4-208ENST00000464362 OR5W2Q8NH69 310 aa8.52□□□□□ -1.05
HPS4-208ENST00000464362 FCAMRQ8WWV6 532 aa8.52□□□□□ -1.05
HPS4-208ENST00000464362 FGF13Q92913 245 aa8.52□□□□□ -1.05
HPS4-208ENST00000464362 CMKLR1Q99788 373 aa8.52□□□□□ -1.05
HPS4-208ENST00000464362 ZNF471Q9BX82 626 aaPredicted RBP8.52□□□□□ -1.05
HPS4-208ENST00000464362 OR2S2Q9NQN1 319 aa8.52□□□□□ -1.05
HPS4-208ENST00000464362 COL4A5P29400 1685 aa8.52□□□□□ -1.05
HPS4-208ENST00000464362 CCDC88CQ9P219 2028 aa8.52□□□□□ -1.05
HPS4-208ENST00000464362 A0A0A6YYC8 382 aaPredicted RBP8.52□□□□□ -1.05
HPS4-208ENST00000464362 ZC3H12DA2A288 527 aaKnown RBP8.52□□□□□ -1.05
HPS4-208ENST00000464362 I3L1I5 382 aaPredicted RBP8.52□□□□□ -1.05
HPS4-208ENST00000464362 SDC3O75056 442 aa8.52□□□□□ -1.05
HPS4-208ENST00000464362 TNFP01375 233 aa8.52□□□□□ -1.05
HPS4-208ENST00000464362 MT-ND4P03905 459 aa8.52□□□□□ -1.05
HPS4-208ENST00000464362 METAP1P53582 386 aa8.52□□□□□ -1.05
HPS4-208ENST00000464362 TAS2R43P59537 309 aa8.52□□□□□ -1.05
HPS4-208ENST00000464362 B4GALNT1Q00973 533 aa8.52□□□□□ -1.05
HPS4-208ENST00000464362 POU4F3Q15319 338 aa8.52□□□□□ -1.05
HPS4-208ENST00000464362 SEC23BQ15437 767 aa8.52□□□□□ -1.05
HPS4-208ENST00000464362 CTF1Q16619 201 aa8.52□□□□□ -1.05
HPS4-208ENST00000464362 ACSM5Q6NUN0 579 aa8.52□□□□□ -1.05
HPS4-208ENST00000464362 C1orf94Q6P1W5 598 aa8.52□□□□□ -1.05
HPS4-208ENST00000464362 LEG1Q6P5S2 330 aa8.52□□□□□ -1.05
HPS4-208ENST00000464362 GPALPP1Q8IXQ4 340 aa8.52□□□□□ -1.05
HPS4-208ENST00000464362 SPERTQ8NA61 448 aa8.52□□□□□ -1.05
HPS4-208ENST00000464362 SMAP2Q8WU79 429 aaPredicted RBP8.52□□□□□ -1.05
HPS4-208ENST00000464362 CHTF18Q8WVB6 975 aa8.52□□□□□ -1.05
HPS4-208ENST00000464362 ACOT11Q8WXI4 607 aaPredicted RBP8.52□□□□□ -1.05
HPS4-208ENST00000464362 THAP4Q8WY91 577 aa8.52□□□□□ -1.05
HPS4-208ENST00000464362 RAB7BQ96AH8 199 aa8.52□□□□□ -1.05
HPS4-208ENST00000464362 BPIFA2Q96DR5 249 aa8.52□□□□□ -1.05
HPS4-208ENST00000464362 SGTBQ96EQ0 304 aa8.52□□□□□ -1.05
HPS4-208ENST00000464362 HS6ST2Q96MM7 605 aa8.52□□□□□ -1.05
HPS4-208ENST00000464362 TGM7Q96PF1 710 aa8.52□□□□□ -1.05
HPS4-208ENST00000464362 SLC6A17Q9H1V8 727 aa8.52□□□□□ -1.05
HPS4-208ENST00000464362 PRDM9Q9NQV7 894 aa8.52□□□□□ -1.05
HPS4-208ENST00000464362 GSKIPQ9P0R6 139 aa8.52□□□□□ -1.05
HPS4-208ENST00000464362 POM121CA8CG34 1229 aa8.51□□□□□ -1.05
HPS4-208ENST00000464362 GABRPO00591 440 aa8.51□□□□□ -1.05
HPS4-208ENST00000464362 KLK8O60259 260 aa8.51□□□□□ -1.05
HPS4-208ENST00000464362 GNRH1P01148 92 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms