RNA–Protein interactions for RNA: ENST00000464168.5

USP4-208, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 601 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-208ENST00000464168 NR1H2P55055 460 aa20.23■□□□□ 0.83
USP4-208ENST00000464168 CAPRIN1Q14444 709 aaKnown RBP20.23■□□□□ 0.83
USP4-208ENST00000464168 IKBIPQ70UQ0 350 aa20.23■□□□□ 0.83
USP4-208ENST00000464168 ZNF611Q8N823 705 aa20.23■□□□□ 0.83
USP4-208ENST00000464168 GPR151Q8TDV0 419 aa20.23■□□□□ 0.83
USP4-208ENST00000464168 SLC9A6Q92581 669 aa20.23■□□□□ 0.83
USP4-208ENST00000464168 PLPPR2Q96GM1 343 aa20.23■□□□□ 0.83
USP4-208ENST00000464168 ADAM21Q9UKJ8 722 aa20.23■□□□□ 0.83
USP4-208ENST00000464168 MCTS1Q9ULC4 181 aaKnown RBP20.23■□□□□ 0.83
USP4-208ENST00000464168 RTTNQ86VV8 2226 aa20.23■□□□□ 0.83
USP4-208ENST00000464168 ANK3Q12955 4377 aaKnown RBP20.22■□□□□ 0.83
USP4-208ENST00000464168 UQCRHLA0A096LP55 91 aa20.22■□□□□ 0.83
USP4-208ENST00000464168 HS3ST1O14792 307 aa20.22■□□□□ 0.83
USP4-208ENST00000464168 CXCL13O43927 109 aa20.22■□□□□ 0.83
USP4-208ENST00000464168 NKX2-2O95096 273 aa20.22■□□□□ 0.83
USP4-208ENST00000464168 NGFRP08138 427 aa20.22■□□□□ 0.83
USP4-208ENST00000464168 GSTA1P08263 222 aa20.22■□□□□ 0.83
USP4-208ENST00000464168 PYGBP11216 843 aa20.22■□□□□ 0.83
USP4-208ENST00000464168 PRPS2P11908 318 aa20.22■□□□□ 0.83
USP4-208ENST00000464168 HSPB3Q12988 150 aa20.22■□□□□ 0.83
USP4-208ENST00000464168 KIAA0040Q15053 153 aa20.22■□□□□ 0.83
USP4-208ENST00000464168 BEND4Q6ZU67 534 aa20.22■□□□□ 0.83
USP4-208ENST00000464168 GALNT10Q86SR1 603 aa20.22■□□□□ 0.83
USP4-208ENST00000464168 WFDC8Q8IUA0 241 aa20.22■□□□□ 0.83
USP4-208ENST00000464168 ACMSDQ8TDX5 336 aa20.22■□□□□ 0.83
USP4-208ENST00000464168 ACTR6Q9GZN1 396 aa20.22■□□□□ 0.83
USP4-208ENST00000464168 CXorf56Q9H5V9 222 aa20.22■□□□□ 0.83
USP4-208ENST00000464168 TNFRSF12AQ9NP84 129 aa20.22■□□□□ 0.83
USP4-208ENST00000464168 GLRX2Q9NS18 164 aa20.22■□□□□ 0.83
USP4-208ENST00000464168 PAQR5Q9NXK6 330 aaPredicted RBP20.22■□□□□ 0.83
USP4-208ENST00000464168 EMCNQ9ULC0 261 aa20.22■□□□□ 0.83
USP4-208ENST00000464168 CCL27Q9Y4X3 112 aa20.22■□□□□ 0.83
USP4-208ENST00000464168 A0A1W2PRB8 838 aa20.21■□□□□ 0.83
USP4-208ENST00000464168 C7orf72A4D263 438 aa20.21■□□□□ 0.83
USP4-208ENST00000464168 G3V2L1 256 aa20.21■□□□□ 0.83
USP4-208ENST00000464168 NDUFB5O43674 189 aa20.21■□□□□ 0.83
USP4-208ENST00000464168 TMCC2O75069 709 aa20.21■□□□□ 0.83
USP4-208ENST00000464168 RSL1D1O76021 490 aaKnown RBP20.21■□□□□ 0.83
USP4-208ENST00000464168 OXSR1O95747 527 aaPredicted RBP20.21■□□□□ 0.83
USP4-208ENST00000464168 ATP5J2P56134 94 aa20.21■□□□□ 0.83
USP4-208ENST00000464168 RAC1P63000 192 aa20.21■□□□□ 0.83
USP4-208ENST00000464168 SLC29A2Q14542 456 aa20.21■□□□□ 0.83
USP4-208ENST00000464168 CPTPQ5TA50 214 aa20.21■□□□□ 0.83
USP4-208ENST00000464168 MFSD12Q6NUT3 480 aa20.21■□□□□ 0.83
USP4-208ENST00000464168 ZAR1Q86SH2 424 aa20.21■□□□□ 0.83
USP4-208ENST00000464168 GATSQ8NAP1 163 aa20.21■□□□□ 0.83
USP4-208ENST00000464168 LRRN4CLQ8ND94 238 aa20.21■□□□□ 0.83
USP4-208ENST00000464168 OR2V1Q8NHB1 315 aa20.21■□□□□ 0.83
USP4-208ENST00000464168 KLHDC3Q9BQ90 382 aa20.21■□□□□ 0.83
USP4-208ENST00000464168 FANCFQ9NPI8 374 aa20.21■□□□□ 0.83
USP4-208ENST00000464168 RRAGDQ9NQL2 400 aaPredicted RBP20.21■□□□□ 0.83
USP4-208ENST00000464168 MED17Q9NVC6 651 aa20.21■□□□□ 0.83
USP4-208ENST00000464168 GPR52Q9Y2T5 361 aa20.21■□□□□ 0.83
USP4-208ENST00000464168 A0A0J9YW62 118 aa20.2■□□□□ 0.82
USP4-208ENST00000464168 TNFSF11O14788 317 aa20.2■□□□□ 0.82
USP4-208ENST00000464168 SYNGR4O95473 234 aa20.2■□□□□ 0.82
USP4-208ENST00000464168 PSMB1P20618 241 aaKnown RBP20.2■□□□□ 0.82
USP4-208ENST00000464168 SLC18A2Q05940 514 aa20.2■□□□□ 0.82
USP4-208ENST00000464168 PLPPR5Q32ZL2 321 aa20.2■□□□□ 0.82
USP4-208ENST00000464168 VPS26BQ4G0F5 336 aa20.2■□□□□ 0.82
USP4-208ENST00000464168 GLE1Q53GS7 698 aaKnown RBP20.2■□□□□ 0.82
USP4-208ENST00000464168 ANKRD26P1Q6NSI1 321 aa20.2■□□□□ 0.82
USP4-208ENST00000464168 ZYG11AQ6WRX3 759 aa20.2■□□□□ 0.82
USP4-208ENST00000464168 FRMD7Q6ZUT3 714 aa20.2■□□□□ 0.82
USP4-208ENST00000464168 ESPNLQ6ZVH7 1005 aa20.2■□□□□ 0.82
USP4-208ENST00000464168 CDRT4Q8N9R6 151 aa20.2■□□□□ 0.82
USP4-208ENST00000464168 FAM110BQ8TC76 370 aa20.2■□□□□ 0.82
USP4-208ENST00000464168 ACTRT2Q8TDY3 377 aa20.2■□□□□ 0.82
USP4-208ENST00000464168 MZB1Q8WU39 189 aa20.2■□□□□ 0.82
USP4-208ENST00000464168 CIDECQ96AQ7 238 aaPredicted RBP20.2■□□□□ 0.82
USP4-208ENST00000464168 ZBTB8AQ96BR9 441 aa20.2■□□□□ 0.82
USP4-208ENST00000464168 CCDC126Q96EE4 140 aa20.2■□□□□ 0.82
USP4-208ENST00000464168 RNF145Q96MT1 663 aa20.2■□□□□ 0.82
USP4-208ENST00000464168 OR10A4Q9H209 315 aa20.2■□□□□ 0.82
USP4-208ENST00000464168 HHATLQ9HCP6 504 aa20.2■□□□□ 0.82
USP4-208ENST00000464168 NTMQ9P121 344 aa20.2■□□□□ 0.82
USP4-208ENST00000464168 DCDC2Q9UHG0 476 aa20.2■□□□□ 0.82
USP4-208ENST00000464168 GIMAP1-GIMAP5A0A087WTJ2 511 aa20.19■□□□□ 0.82
USP4-208ENST00000464168 PDPK1O15530 556 aa20.19■□□□□ 0.82
USP4-208ENST00000464168 RIPK2O43353 540 aa20.19■□□□□ 0.82
USP4-208ENST00000464168 SEC22BO75396 215 aa20.19■□□□□ 0.82
USP4-208ENST00000464168 ACP2P11117 423 aa20.19■□□□□ 0.82
USP4-208ENST00000464168 PRKAG1P54619 331 aa20.19■□□□□ 0.82
USP4-208ENST00000464168 KRTAP1-1Q07627 177 aa20.19■□□□□ 0.82
USP4-208ENST00000464168 ZNF844Q08AG5 666 aa20.19■□□□□ 0.82
USP4-208ENST00000464168 TNK1Q13470 666 aa20.19■□□□□ 0.82
USP4-208ENST00000464168 HBMQ6B0K9 141 aa20.19■□□□□ 0.82
USP4-208ENST00000464168 TRMT10CQ7L0Y3 403 aaKnown RBP20.19■□□□□ 0.82
USP4-208ENST00000464168 CEP70Q8NHQ1 597 aa20.19■□□□□ 0.82
USP4-208ENST00000464168 POC1BQ8TC44 478 aa20.19■□□□□ 0.82
USP4-208ENST00000464168 AKAP1Q92667 903 aaKnown RBP eCLIP20.19■□□□□ 0.82
USP4-208ENST00000464168 OSTF1Q92882 214 aa20.19■□□□□ 0.82
USP4-208ENST00000464168 GIMAP5Q96F15 307 aa20.19■□□□□ 0.82
USP4-208ENST00000464168 METTL2AQ96IZ6 378 aaKnown RBP20.19■□□□□ 0.82
USP4-208ENST00000464168 TMEM185BQ9H7F4 350 aa20.19■□□□□ 0.82
USP4-208ENST00000464168 FBXO34Q9NWN3 711 aa20.19■□□□□ 0.82
USP4-208ENST00000464168 NPIPB8E9PQR5 432 aa20.18■□□□□ 0.82
USP4-208ENST00000464168 H3BQF6 201 aa20.18■□□□□ 0.82
USP4-208ENST00000464168 SOX30O94993 753 aa20.18■□□□□ 0.82
USP4-208ENST00000464168 KCNK2O95069 426 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms