RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 EIPR1Q53HC9 387 aa9.76□□□□□ -0.85
UBR4-208ENST00000459947 INTS11Q5TA45 600 aaKnown RBP9.76□□□□□ -0.85
UBR4-208ENST00000459947 TNFAIP8L2Q6P589 184 aaPredicted RBP9.76□□□□□ -0.85
UBR4-208ENST00000459947 ERICH5Q6P6B1 374 aa9.76□□□□□ -0.85
UBR4-208ENST00000459947 IFNEQ86WN2 208 aa9.76□□□□□ -0.85
UBR4-208ENST00000459947 OR14L1PQ8NHC6 308 aa9.76□□□□□ -0.85
UBR4-208ENST00000459947 VKORC1Q9BQB6 163 aa9.76□□□□□ -0.85
UBR4-208ENST00000459947 BCL2L10Q9HD36 194 aa9.76□□□□□ -0.85
UBR4-208ENST00000459947 OSGIN2Q9Y236 505 aa9.76□□□□□ -0.85
UBR4-208ENST00000459947 ARL2BPQ9Y2Y0 163 aa9.76□□□□□ -0.85
UBR4-208ENST00000459947 A0A0G2JMM0 328 aa9.75□□□□□ -0.85
UBR4-208ENST00000459947 A0A1W2PPB8 328 aa9.75□□□□□ -0.85
UBR4-208ENST00000459947 A0A1W2PRS3 328 aa9.75□□□□□ -0.85
UBR4-208ENST00000459947 PINLYPA6NC86 204 aa9.75□□□□□ -0.85
UBR4-208ENST00000459947 SERINC4A6NH21 518 aa9.75□□□□□ -0.85
UBR4-208ENST00000459947 GJE1A6NN92 205 aa9.75□□□□□ -0.85
UBR4-208ENST00000459947 KIR3DP1A8MWS1 328 aa9.75□□□□□ -0.85
UBR4-208ENST00000459947 G3V3Y1 287 aa9.75□□□□□ -0.85
UBR4-208ENST00000459947 HK1P19367 917 aa9.75□□□□□ -0.85
UBR4-208ENST00000459947 ADH6P28332 368 aa9.75□□□□□ -0.85
UBR4-208ENST00000459947 CRATP43155 626 aa9.75□□□□□ -0.85
UBR4-208ENST00000459947 LARS2Q15031 903 aaKnown RBP9.75□□□□□ -0.85
UBR4-208ENST00000459947 LIN52Q52LA3 116 aa9.75□□□□□ -0.85
UBR4-208ENST00000459947 FBXO30Q8TB52 745 aa9.75□□□□□ -0.85
UBR4-208ENST00000459947 CMTM5Q96DZ9 223 aa9.75□□□□□ -0.85
UBR4-208ENST00000459947 ZFP3Q96NJ6 502 aa9.75□□□□□ -0.85
UBR4-208ENST00000459947 DEFB127Q9H1M4 99 aa9.75□□□□□ -0.85
UBR4-208ENST00000459947 NDE1Q9NXR1 346 aa9.75□□□□□ -0.85
UBR4-208ENST00000459947 SPIN1Q9Y657 262 aaPredicted RBP9.75□□□□□ -0.85
UBR4-208ENST00000459947 AP4B1Q9Y6B7 739 aa9.75□□□□□ -0.85
UBR4-208ENST00000459947 PRORSD1PA6NEY8 169 aa9.75□□□□□ -0.85
UBR4-208ENST00000459947 THBS1P07996 1170 aa9.75□□□□□ -0.85
UBR4-208ENST00000459947 UBL4AP11441 157 aa9.75□□□□□ -0.85
UBR4-208ENST00000459947 CAPN3P20807 821 aa9.75□□□□□ -0.85
UBR4-208ENST00000459947 DRD4P21917 467 aa9.75□□□□□ -0.85
UBR4-208ENST00000459947 P2RX1P51575 399 aa9.75□□□□□ -0.85
UBR4-208ENST00000459947 TOMM20Q15388 145 aa9.75□□□□□ -0.85
UBR4-208ENST00000459947 IGFBP7Q16270 282 aa9.75□□□□□ -0.85
UBR4-208ENST00000459947 KLHL26Q53HC5 615 aa9.75□□□□□ -0.85
UBR4-208ENST00000459947 SLC2A7Q6PXP3 512 aa9.75□□□□□ -0.85
UBR4-208ENST00000459947 MEIOBQ8N635 442 aa9.75□□□□□ -0.85
UBR4-208ENST00000459947 OR8J3Q8NGG0 315 aa9.75□□□□□ -0.85
UBR4-208ENST00000459947 VPS33AQ96AX1 596 aa9.75□□□□□ -0.85
UBR4-208ENST00000459947 THOC1Q96FV9 657 aaKnown RBP9.75□□□□□ -0.85
UBR4-208ENST00000459947 SFXN2Q96NB2 322 aa9.75□□□□□ -0.85
UBR4-208ENST00000459947 TMEM38AQ9H6F2 299 aa9.75□□□□□ -0.85
UBR4-208ENST00000459947 CLEC18AA5D8T8 446 aa9.75□□□□□ -0.85
UBR4-208ENST00000459947 SNX3O60493 162 aa9.75□□□□□ -0.85
UBR4-208ENST00000459947 ETS2P15036 469 aa9.75□□□□□ -0.85
UBR4-208ENST00000459947 PGCP20142 388 aa9.75□□□□□ -0.85
UBR4-208ENST00000459947 RPS3AP61247 264 aaKnown RBP9.75□□□□□ -0.85
UBR4-208ENST00000459947 FGFBP1Q14512 234 aa9.75□□□□□ -0.85
UBR4-208ENST00000459947 RGNQ15493 299 aa9.75□□□□□ -0.85
UBR4-208ENST00000459947 CLEC18BQ6UXF7 455 aa9.75□□□□□ -0.85
UBR4-208ENST00000459947 HACD2Q6Y1H2 254 aa9.75□□□□□ -0.85
UBR4-208ENST00000459947 AMER2Q8N7J2 671 aa9.75□□□□□ -0.85
UBR4-208ENST00000459947 CLEC18CQ8NCF0 446 aa9.75□□□□□ -0.85
UBR4-208ENST00000459947 WDR60Q8WVS4 1066 aa9.75□□□□□ -0.85
UBR4-208ENST00000459947 ST8SIA1Q92185 356 aa9.75□□□□□ -0.85
UBR4-208ENST00000459947 C1GALT1C1Q96EU7 318 aa9.75□□□□□ -0.85
UBR4-208ENST00000459947 CGREF1Q99674 301 aa9.75□□□□□ -0.85
UBR4-208ENST00000459947 ELAC2Q9BQ52 826 aaKnown RBP9.75□□□□□ -0.85
UBR4-208ENST00000459947 DSN1Q9H410 356 aa9.75□□□□□ -0.85
UBR4-208ENST00000459947 ACAD8Q9UKU7 415 aa9.75□□□□□ -0.85
UBR4-208ENST00000459947 TRGV8A0A0C4DH27 118 aa9.74□□□□□ -0.85
UBR4-208ENST00000459947 HMGN4O00479 90 aa9.74□□□□□ -0.85
UBR4-208ENST00000459947 MRASO14807 208 aa9.74□□□□□ -0.85
UBR4-208ENST00000459947 DNAJA2O60884 412 aa9.74□□□□□ -0.85
UBR4-208ENST00000459947 IGKV1D-16P01601 117 aa9.74□□□□□ -0.85
UBR4-208ENST00000459947 TPOP07202 933 aa9.74□□□□□ -0.85
UBR4-208ENST00000459947 ARAFP10398 606 aa9.74□□□□□ -0.85
UBR4-208ENST00000459947 GPX2P18283 190 aa9.74□□□□□ -0.85
UBR4-208ENST00000459947 CBFBQ13951 182 aa9.74□□□□□ -0.85
UBR4-208ENST00000459947 RNFT1Q5M7Z0 435 aa9.74□□□□□ -0.85
UBR4-208ENST00000459947 CGB2Q6NT52 195 aa9.74□□□□□ -0.85
UBR4-208ENST00000459947 DNAJC14Q6Y2X3 702 aaPredicted RBP9.74□□□□□ -0.85
UBR4-208ENST00000459947 PHOSPHO1Q8TCT1 267 aa9.74□□□□□ -0.85
UBR4-208ENST00000459947 ABTB1Q969K4 478 aaPredicted RBP9.74□□□□□ -0.85
UBR4-208ENST00000459947 ZNF607Q96SK3 696 aa9.74□□□□□ -0.85
UBR4-208ENST00000459947 TAS2R10Q9NYW0 307 aa9.74□□□□□ -0.85
UBR4-208ENST00000459947 PCDHB14Q9Y5E9 798 aa9.74□□□□□ -0.85
UBR4-208ENST00000459947 SHANK1Q9Y566 2161 aa9.74□□□□□ -0.85
UBR4-208ENST00000459947 TRBV5-3A0A0A0MS03 114 aa9.74□□□□□ -0.85
UBR4-208ENST00000459947 ZNF264O43296 627 aa9.74□□□□□ -0.85
UBR4-208ENST00000459947 GSNP06396 782 aa9.74□□□□□ -0.85
UBR4-208ENST00000459947 CDKN2CP42773 168 aa9.74□□□□□ -0.85
UBR4-208ENST00000459947 HTR3AP46098 478 aa9.74□□□□□ -0.85
UBR4-208ENST00000459947 MAP2K6P52564 334 aa9.74□□□□□ -0.85
UBR4-208ENST00000459947 RUNDC3AQ59EK9 446 aa9.74□□□□□ -0.85
UBR4-208ENST00000459947 FAM83FQ8NEG4 500 aaPredicted RBP9.74□□□□□ -0.85
UBR4-208ENST00000459947 CPPED1Q9BRF8 314 aaPredicted RBP9.74□□□□□ -0.85
UBR4-208ENST00000459947 SERHL2Q9H4I8 314 aa9.74□□□□□ -0.85
UBR4-208ENST00000459947 SLC52A3Q9NQ40 469 aa9.74□□□□□ -0.85
UBR4-208ENST00000459947 GPC6Q9Y625 555 aaPredicted RBP9.74□□□□□ -0.85
UBR4-208ENST00000459947 SPTA1P02549 2419 aa9.74□□□□□ -0.85
UBR4-208ENST00000459947 A0A1B0GTH9 108 aa9.74□□□□□ -0.85
UBR4-208ENST00000459947 FAAHO00519 579 aa9.74□□□□□ -0.85
UBR4-208ENST00000459947 AGFG2O95081 481 aa9.74□□□□□ -0.85
UBR4-208ENST00000459947 HOXB9P17482 250 aaPredicted RBP9.74□□□□□ -0.85
UBR4-208ENST00000459947 MNAT1P51948 309 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms