RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 PEX12O00623 359 aa15.49■□□□□ 0.07
CCDC43-202ENST00000457422 CDC42EP2O14613 210 aa15.49■□□□□ 0.07
CCDC43-202ENST00000457422 NKX2-2O95096 273 aa15.49■□□□□ 0.07
CCDC43-202ENST00000457422 LYPD3O95274 346 aa15.49■□□□□ 0.07
CCDC43-202ENST00000457422 GUSBP08236 651 aa15.49■□□□□ 0.07
CCDC43-202ENST00000457422 RPS19P39019 145 aaKnown RBP15.49■□□□□ 0.07
CCDC43-202ENST00000457422 CDH11P55287 796 aa15.49■□□□□ 0.07
CCDC43-202ENST00000457422 POU6F2P78424 691 aaPredicted RBP15.49■□□□□ 0.07
CCDC43-202ENST00000457422 CDC20Q12834 499 aa15.49■□□□□ 0.07
CCDC43-202ENST00000457422 FLYWCH1Q4VC44 716 aa15.49■□□□□ 0.07
CCDC43-202ENST00000457422 ARMC6Q6NXE6 501 aa15.49■□□□□ 0.07
CCDC43-202ENST00000457422 OR2T33Q8NG76 320 aa15.49■□□□□ 0.07
CCDC43-202ENST00000457422 BRIX1Q8TDN6 353 aaKnown RBP15.49■□□□□ 0.07
CCDC43-202ENST00000457422 GPR151Q8TDV0 419 aa15.49■□□□□ 0.07
CCDC43-202ENST00000457422 ZNF223Q9UK11 482 aaPredicted RBP15.49■□□□□ 0.07
CCDC43-202ENST00000457422 TDRD6O60522 2096 aaKnown RBP15.49■□□□□ 0.07
CCDC43-202ENST00000457422 GXYLT2A0PJZ3 443 aa15.48■□□□□ 0.07
CCDC43-202ENST00000457422 COQ9O75208 318 aa15.48■□□□□ 0.07
CCDC43-202ENST00000457422 SNX4O95219 450 aa15.48■□□□□ 0.07
CCDC43-202ENST00000457422 CBX7O95931 251 aa15.48■□□□□ 0.07
CCDC43-202ENST00000457422 CH25HO95992 272 aa15.48■□□□□ 0.07
CCDC43-202ENST00000457422 HMGN1P05114 100 aa15.48■□□□□ 0.07
CCDC43-202ENST00000457422 GKN3PP0CG01 181 aa15.48■□□□□ 0.07
CCDC43-202ENST00000457422 CD97P48960 835 aa15.48■□□□□ 0.07
CCDC43-202ENST00000457422 TPBGQ13641 420 aa15.48■□□□□ 0.07
CCDC43-202ENST00000457422 OR1Q1Q15612 314 aa15.48■□□□□ 0.07
CCDC43-202ENST00000457422 FIGNL1Q6PIW4 674 aa15.48■□□□□ 0.07
CCDC43-202ENST00000457422 SLC22A16Q86VW1 577 aa15.48■□□□□ 0.07
CCDC43-202ENST00000457422 C19orf47Q8N9M1 422 aaKnown RBP15.48■□□□□ 0.07
CCDC43-202ENST00000457422 OR9A4Q8NGU2 314 aa15.48■□□□□ 0.07
CCDC43-202ENST00000457422 KLHDC7BQ96G42 594 aa15.48■□□□□ 0.07
CCDC43-202ENST00000457422 LRRC61Q9BV99 259 aa15.48■□□□□ 0.07
CCDC43-202ENST00000457422 ABCB10Q9NRK6 738 aa15.48■□□□□ 0.07
CCDC43-202ENST00000457422 FBXL21Q9UKT6 434 aa15.48■□□□□ 0.07
CCDC43-202ENST00000457422 TBX1O43435 398 aa15.48■□□□□ 0.07
CCDC43-202ENST00000457422 LIMS3P0CW19 117 aa15.48■□□□□ 0.07
CCDC43-202ENST00000457422 LIMS4P0CW20 117 aa15.48■□□□□ 0.07
CCDC43-202ENST00000457422 ZNF155Q12901 538 aaPredicted RBP15.48■□□□□ 0.07
CCDC43-202ENST00000457422 DNASE1L3Q13609 305 aa15.48■□□□□ 0.07
CCDC43-202ENST00000457422 PRTGQ2VWP7 1150 aa15.48■□□□□ 0.07
CCDC43-202ENST00000457422 SPANXN2Q5MJ10 180 aa15.48■□□□□ 0.07
CCDC43-202ENST00000457422 AGAP7PQ5VUJ5 663 aa15.48■□□□□ 0.07
CCDC43-202ENST00000457422 NXNL2Q5VZ03 156 aa15.48■□□□□ 0.07
CCDC43-202ENST00000457422 DGAT2L6Q6ZPD8 337 aa15.48■□□□□ 0.07
CCDC43-202ENST00000457422 SYT13Q7L8C5 426 aa15.48■□□□□ 0.07
CCDC43-202ENST00000457422 VWA5B2Q8N398 1253 aa15.48■□□□□ 0.07
CCDC43-202ENST00000457422 FAM160A2Q8N612 972 aaPredicted RBP15.48■□□□□ 0.07
CCDC43-202ENST00000457422 ZNF485Q8NCK3 441 aa15.48■□□□□ 0.07
CCDC43-202ENST00000457422 RLN3Q8WXF3 142 aa15.48■□□□□ 0.07
CCDC43-202ENST00000457422 TM9SF4Q92544 642 aa15.48■□□□□ 0.07
CCDC43-202ENST00000457422 NELL2Q99435 816 aa15.48■□□□□ 0.07
CCDC43-202ENST00000457422 RBCK1Q9BYM8 510 aa15.48■□□□□ 0.07
CCDC43-202ENST00000457422 BARHL1Q9BZE3 327 aa15.48■□□□□ 0.07
CCDC43-202ENST00000457422 EXOGQ9Y2C4 368 aaKnown RBP15.48■□□□□ 0.07
CCDC43-202ENST00000457422 LOC110117498-PIK3R3F6TDL0 507 aa15.47■□□□□ 0.07
CCDC43-202ENST00000457422 BOLA2-SMG1P6H3BVE0 249 aa15.47■□□□□ 0.07
CCDC43-202ENST00000457422 CHST10O43529 356 aa15.47■□□□□ 0.07
CCDC43-202ENST00000457422 HTR1FP30939 366 aa15.47■□□□□ 0.07
CCDC43-202ENST00000457422 GABRA3P34903 492 aa15.47■□□□□ 0.07
CCDC43-202ENST00000457422 RORCP51449 518 aa15.47■□□□□ 0.07
CCDC43-202ENST00000457422 MAZP56270 477 aaKnown RBP15.47■□□□□ 0.07
CCDC43-202ENST00000457422 STEAP3Q658P3 488 aa15.47■□□□□ 0.07
CCDC43-202ENST00000457422 WDR88Q6ZMY6 472 aa15.47■□□□□ 0.07
CCDC43-202ENST00000457422 SHFQ7M4L6 423 aa15.47■□□□□ 0.07
CCDC43-202ENST00000457422 LAPTM4BQ86VI4 370 aa15.47■□□□□ 0.07
CCDC43-202ENST00000457422 AVL9Q8NBF6 648 aa15.47■□□□□ 0.07
CCDC43-202ENST00000457422 TMEM239Q8WW34 195 aa15.47■□□□□ 0.07
CCDC43-202ENST00000457422 ARHGAP9Q9BRR9 750 aa15.47■□□□□ 0.07
CCDC43-202ENST00000457422 LMF2Q9BU23 707 aaKnown RBP15.47■□□□□ 0.07
CCDC43-202ENST00000457422 SMURF1Q9HCE7 757 aa15.47■□□□□ 0.07
CCDC43-202ENST00000457422 CPNE5Q9HCH3 593 aa15.47■□□□□ 0.07
CCDC43-202ENST00000457422 POLE4Q9NR33 117 aa15.47■□□□□ 0.07
CCDC43-202ENST00000457422 C14orf105Q9NVL8 296 aa15.47■□□□□ 0.07
CCDC43-202ENST00000457422 TXNL4BQ9NX01 149 aaKnown RBP15.47■□□□□ 0.07
CCDC43-202ENST00000457422 IL20RAQ9UHF4 553 aa15.47■□□□□ 0.07
CCDC43-202ENST00000457422 SPIN1Q9Y657 262 aaPredicted RBP15.47■□□□□ 0.07
CCDC43-202ENST00000457422 UNC119BA6NIH7 251 aa15.47■□□□□ 0.07
CCDC43-202ENST00000457422 CHURC1-FNTBB4DL54 471 aa15.47■□□□□ 0.07
CCDC43-202ENST00000457422 IL1AP01583 271 aa15.47■□□□□ 0.07
CCDC43-202ENST00000457422 TSPAN19P0C672 248 aa15.47■□□□□ 0.07
CCDC43-202ENST00000457422 S1PR1P21453 382 aa15.47■□□□□ 0.07
CCDC43-202ENST00000457422 GCGRP47871 477 aa15.47■□□□□ 0.07
CCDC43-202ENST00000457422 PLAURQ03405 335 aa15.47■□□□□ 0.07
CCDC43-202ENST00000457422 PLK5Q496M5 336 aa15.47■□□□□ 0.07
CCDC43-202ENST00000457422 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.47■□□□□ 0.07
CCDC43-202ENST00000457422 OR2G6Q5TZ20 316 aa15.47■□□□□ 0.07
CCDC43-202ENST00000457422 TDHQ8IZJ6 230 aa15.47■□□□□ 0.07
CCDC43-202ENST00000457422 OR52R1Q8NGF1 315 aa15.47■□□□□ 0.07
CCDC43-202ENST00000457422 SAMD8Q96LT4 415 aa15.47■□□□□ 0.07
CCDC43-202ENST00000457422 JAM3Q9BX67 310 aa15.47■□□□□ 0.07
CCDC43-202ENST00000457422 UBQLN3Q9H347 655 aa15.47■□□□□ 0.07
CCDC43-202ENST00000457422 SF3B6Q9Y3B4 125 aaKnown RBP15.47■□□□□ 0.07
CCDC43-202ENST00000457422 PCDHGB6Q9Y5F9 930 aa15.47■□□□□ 0.07
CCDC43-202ENST00000457422 CTDSP2O14595 271 aa15.46■□□□□ 0.07
CCDC43-202ENST00000457422 OR10H2O60403 315 aa15.46■□□□□ 0.07
CCDC43-202ENST00000457422 SRPX2O60687 465 aaPredicted RBP15.46■□□□□ 0.07
CCDC43-202ENST00000457422 KCNK2O95069 426 aa15.46■□□□□ 0.07
CCDC43-202ENST00000457422 IGHA1P01876 353 aa15.46■□□□□ 0.07
CCDC43-202ENST00000457422 ZGLP1P0C6A0 271 aa15.46■□□□□ 0.07
CCDC43-202ENST00000457422 CHRNB1P11230 501 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms