RNA–Protein interactions for RNA: ENST00000456257.1

ERCC3-204, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-204ENST00000456257 CCL4P13236 92 aa6.91□□□□□ -1.3
ERCC3-204ENST00000456257 OSMP13725 252 aa6.91□□□□□ -1.3
ERCC3-204ENST00000456257 TNNI3P19429 210 aa6.91□□□□□ -1.3
ERCC3-204ENST00000456257 TBXA2RP21731 343 aa6.91□□□□□ -1.3
ERCC3-204ENST00000456257 GGT2P36268 569 aa6.91□□□□□ -1.3
ERCC3-204ENST00000456257 RPL5P46777 297 aaKnown RBP6.91□□□□□ -1.3
ERCC3-204ENST00000456257 OMPP47874 163 aa6.91□□□□□ -1.3
ERCC3-204ENST00000456257 PNLIPRP2P54317 469 aa6.91□□□□□ -1.3
ERCC3-204ENST00000456257 EMP2P54851 167 aa6.91□□□□□ -1.3
ERCC3-204ENST00000456257 DLX5P56178 289 aa6.91□□□□□ -1.3
ERCC3-204ENST00000456257 NUP107P57740 925 aa6.91□□□□□ -1.3
ERCC3-204ENST00000456257 SNRPGP62308 76 aaKnown RBP6.91□□□□□ -1.3
ERCC3-204ENST00000456257 HPCAP84074 193 aa6.91□□□□□ -1.3
ERCC3-204ENST00000456257 CDK5Q00535 292 aa6.91□□□□□ -1.3
ERCC3-204ENST00000456257 OCA2Q04671 838 aa6.91□□□□□ -1.3
ERCC3-204ENST00000456257 CD47Q08722 323 aa6.91□□□□□ -1.3
ERCC3-204ENST00000456257 RAPSNQ13702 412 aa6.91□□□□□ -1.3
ERCC3-204ENST00000456257 LAPTM4AQ15012 233 aa6.91□□□□□ -1.3
ERCC3-204ENST00000456257 EBPQ15125 230 aaKnown RBP6.91□□□□□ -1.3
ERCC3-204ENST00000456257 LPAL2Q16609 132 aa6.91□□□□□ -1.3
ERCC3-204ENST00000456257 TMEM201Q5SNT2 666 aa6.91□□□□□ -1.3
ERCC3-204ENST00000456257 MRPL2Q5T653 305 aaKnown RBP6.91□□□□□ -1.3
ERCC3-204ENST00000456257 C1orf189Q5VU69 101 aa6.91□□□□□ -1.3
ERCC3-204ENST00000456257 LCN10Q6JVE6 187 aa6.91□□□□□ -1.3
ERCC3-204ENST00000456257 KRT80Q6KB66 452 aa6.91□□□□□ -1.3
ERCC3-204ENST00000456257 TTC33Q6PID6 262 aaPredicted RBP6.91□□□□□ -1.3
ERCC3-204ENST00000456257 KLHL17Q6TDP4 642 aa6.91□□□□□ -1.3
ERCC3-204ENST00000456257 ZNF836Q6ZNA1 936 aa6.91□□□□□ -1.3
ERCC3-204ENST00000456257 RBM44Q6ZP01 1051 aaKnown RBP6.91□□□□□ -1.3
ERCC3-204ENST00000456257 CLDN22Q8N7P3 220 aa6.91□□□□□ -1.3
ERCC3-204ENST00000456257 ZNF321PQ8N8H1 164 aa6.91□□□□□ -1.3
ERCC3-204ENST00000456257 ATG16L2Q8NAA4 619 aa6.91□□□□□ -1.3
ERCC3-204ENST00000456257 APCDD1LQ8NCL9 501 aa6.91□□□□□ -1.3
ERCC3-204ENST00000456257 SETD9Q8NE22 299 aa6.91□□□□□ -1.3
ERCC3-204ENST00000456257 TSPAN14Q8NG11 270 aa6.91□□□□□ -1.3
ERCC3-204ENST00000456257 OR4N2Q8NGD1 307 aa6.91□□□□□ -1.3
ERCC3-204ENST00000456257 OR52J3Q8NH60 311 aa6.91□□□□□ -1.3
ERCC3-204ENST00000456257 WDR36Q8NI36 951 aaKnown RBP6.91□□□□□ -1.3
ERCC3-204ENST00000456257 NUBPLQ8TB37 319 aa6.91□□□□□ -1.3
ERCC3-204ENST00000456257 DOK4Q8TEW6 326 aa6.91□□□□□ -1.3
ERCC3-204ENST00000456257 TRUB1Q8WWH5 349 aaKnown RBP6.91□□□□□ -1.3
ERCC3-204ENST00000456257 ACOT11Q8WXI4 607 aaPredicted RBP6.91□□□□□ -1.3
ERCC3-204ENST00000456257 CNOT9Q92600 299 aaKnown RBP6.91□□□□□ -1.3
ERCC3-204ENST00000456257 SLC38A4Q969I6 547 aa6.91□□□□□ -1.3
ERCC3-204ENST00000456257 RMND5BQ96G75 393 aaPredicted RBP6.91□□□□□ -1.3
ERCC3-204ENST00000456257 MPP4Q96JB8 637 aa6.91□□□□□ -1.3
ERCC3-204ENST00000456257 IMMP1LQ96LU5 166 aa6.91□□□□□ -1.3
ERCC3-204ENST00000456257 HS6ST2Q96MM7 605 aa6.91□□□□□ -1.3
ERCC3-204ENST00000456257 CCNL2Q96S94 520 aaPredicted RBP6.91□□□□□ -1.3
ERCC3-204ENST00000456257 MCHR1Q99705 422 aa6.91□□□□□ -1.3
ERCC3-204ENST00000456257 NIPSNAP1Q9BPW8 284 aa6.91□□□□□ -1.3
ERCC3-204ENST00000456257 DDA1Q9BW61 102 aa6.91□□□□□ -1.3
ERCC3-204ENST00000456257 RBCK1Q9BYM8 510 aa6.91□□□□□ -1.3
ERCC3-204ENST00000456257 MRPS26Q9BYN8 205 aaKnown RBP6.91□□□□□ -1.3
ERCC3-204ENST00000456257 UCK2Q9BZX2 261 aa6.91□□□□□ -1.3
ERCC3-204ENST00000456257 TRIM2Q9C040 744 aa6.91□□□□□ -1.3
ERCC3-204ENST00000456257 FAM192AQ9GZU8 254 aa6.91□□□□□ -1.3
ERCC3-204ENST00000456257 NXF5Q9H1B4 397 aaKnown RBP6.91□□□□□ -1.3
ERCC3-204ENST00000456257 SOX17Q9H6I2 414 aaPredicted RBP6.91□□□□□ -1.3
ERCC3-204ENST00000456257 EXOSC3Q9NQT5 275 aaKnown RBP6.91□□□□□ -1.3
ERCC3-204ENST00000456257 PNO1Q9NRX1 252 aaKnown RBP6.91□□□□□ -1.3
ERCC3-204ENST00000456257 KRT84Q9NSB2 600 aa6.91□□□□□ -1.3
ERCC3-204ENST00000456257 SEMA4GQ9NTN9 838 aa6.91□□□□□ -1.3
ERCC3-204ENST00000456257 FKBP14Q9NWM8 211 aa6.91□□□□□ -1.3
ERCC3-204ENST00000456257 IRAK4Q9NWZ3 460 aa6.91□□□□□ -1.3
ERCC3-204ENST00000456257 TESQ9UGI8 421 aaKnown RBP6.91□□□□□ -1.3
ERCC3-204ENST00000456257 ZNF223Q9UK11 482 aaPredicted RBP6.91□□□□□ -1.3
ERCC3-204ENST00000456257 TMCC3Q9ULS5 477 aa6.91□□□□□ -1.3
ERCC3-204ENST00000456257 COL27A1Q8IZC6 1860 aaPredicted RBP6.91□□□□□ -1.3
ERCC3-204ENST00000456257 KMT2EQ8IZD2 1858 aa6.91□□□□□ -1.3
ERCC3-204ENST00000456257 FER1L5A0AVI2 2057 aa6.91□□□□□ -1.3
ERCC3-204ENST00000456257 OTOGLQ3ZCN5 2332 aa6.9□□□□□ -1.3
ERCC3-204ENST00000456257 ADAMTS9Q9P2N4 1935 aa6.9□□□□□ -1.3
ERCC3-204ENST00000456257 A0A087WXM4 84 aa6.9□□□□□ -1.3
ERCC3-204ENST00000456257 C2orf92A0A1B0GVN3 265 aa6.9□□□□□ -1.3
ERCC3-204ENST00000456257 SERINC4A6NH21 518 aa6.9□□□□□ -1.3
ERCC3-204ENST00000456257 SAGE2PA6NJ88 616 aa6.9□□□□□ -1.3
ERCC3-204ENST00000456257 PCNX2A6NKB5 2137 aa6.9□□□□□ -1.3
ERCC3-204ENST00000456257 CLDN24A6NM45 220 aa6.9□□□□□ -1.3
ERCC3-204ENST00000456257 TNFRSF10AO00220 468 aa6.9□□□□□ -1.3
ERCC3-204ENST00000456257 PEX12O00623 359 aa6.9□□□□□ -1.3
ERCC3-204ENST00000456257 AP3D1O14617 1153 aa6.9□□□□□ -1.3
ERCC3-204ENST00000456257 BCKDKO14874 412 aa6.9□□□□□ -1.3
ERCC3-204ENST00000456257 FADS1O60427 444 aa6.9□□□□□ -1.3
ERCC3-204ENST00000456257 ADAM11O75078 769 aa6.9□□□□□ -1.3
ERCC3-204ENST00000456257 BCAS1O75363 584 aaPredicted RBP6.9□□□□□ -1.3
ERCC3-204ENST00000456257 WBP4O75554 376 aaKnown RBP6.9□□□□□ -1.3
ERCC3-204ENST00000456257 CLIC3O95833 236 aa6.9□□□□□ -1.3
ERCC3-204ENST00000456257 CLPTM1O96005 669 aa6.9□□□□□ -1.3
ERCC3-204ENST00000456257 KLK3P07288 261 aaPredicted RBP6.9□□□□□ -1.3
ERCC3-204ENST00000456257 RAB40ALP0C0E4 278 aa6.9□□□□□ -1.3
ERCC3-204ENST00000456257 CCNYL3P0C7X3 344 aa6.9□□□□□ -1.3
ERCC3-204ENST00000456257 PRG2P13727 222 aa6.9□□□□□ -1.3
ERCC3-204ENST00000456257 GSTM3P21266 225 aa6.9□□□□□ -1.3
ERCC3-204ENST00000456257 AGXTP21549 392 aa6.9□□□□□ -1.3
ERCC3-204ENST00000456257 MMP11P24347 488 aa6.9□□□□□ -1.3
ERCC3-204ENST00000456257 CHMP24386 653 aa6.9□□□□□ -1.3
ERCC3-204ENST00000456257 HTR2AP28223 471 aa6.9□□□□□ -1.3
ERCC3-204ENST00000456257 IFNA8P32881 189 aa6.9□□□□□ -1.3
ERCC3-204ENST00000456257 IFNGR2P38484 337 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms