RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 DENND6AQ8IWF6 608 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 LMNTD2Q8IXW0 634 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 ARIH2OSQ8N7S6 290 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 BBOF1Q8ND07 529 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 TTLQ8NG68 377 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 OR2L5Q8NG80 312 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 ATL1Q8WXF7 558 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 ATG4AQ8WYN0 398 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 ANKRD7Q92527 254 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 AKAP1Q92667 903 aaKnown RBP eCLIP3.29□□□□□ -1.88
RBM39-220ENST00000455343 REPS1Q96D71 796 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 C11orf24Q96F05 449 aaPredicted RBP3.29□□□□□ -1.88
RBM39-220ENST00000455343 PGM2Q96G03 612 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 FAR2Q96K12 515 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 RUNDC3BQ96NL0 473 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 FAM111AQ96PZ2 611 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 SERINC2Q96SA4 455 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 NDNQ99608 321 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 SLC39A3Q9BRY0 314 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 H2AFJQ9BTM1 129 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 FRMD8P1Q9BZ68 369 aaPredicted RBP3.29□□□□□ -1.88
RBM39-220ENST00000455343 OR2B2Q9GZK3 357 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 WWTR1Q9GZV5 400 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 SHARPINQ9H0F6 387 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 OPN3Q9H1Y3 402 aaPredicted RBP3.29□□□□□ -1.88
RBM39-220ENST00000455343 OR10A4Q9H209 315 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 NT5DC2Q9H857 520 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 LYRM4Q9HD34 91 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 FBXO6Q9NRD1 293 aaPredicted RBP3.29□□□□□ -1.88
RBM39-220ENST00000455343 HOMER3Q9NSC5 361 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 RLIMQ9NVW2 624 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 TEX10Q9NXF1 929 aaPredicted RBP3.29□□□□□ -1.88
RBM39-220ENST00000455343 ARL15Q9NXU5 204 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 EHD3Q9NZN3 535 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 PAK5Q9P286 719 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 HEY2Q9UBP5 337 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 PTBP2Q9UKA9 531 aaKnown RBP3.29□□□□□ -1.88
RBM39-220ENST00000455343 EXO1Q9UQ84 846 aaKnown RBP3.29□□□□□ -1.88
RBM39-220ENST00000455343 LIPT1Q9Y234 373 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 SLC22A14Q9Y267 594 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 DLGAP4Q9Y2H0 992 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 KCNE2Q9Y6J6 123 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 KIAA1549Q9HCM3 1950 aa3.29□□□□□ -1.88
RBM39-220ENST00000455343 RAI1Q7Z5J4 1906 aaPredicted RBP3.29□□□□□ -1.88
RBM39-220ENST00000455343 HEATR5BQ9P2D3 2071 aa3.28□□□□□ -1.88
RBM39-220ENST00000455343 A0A0G2JK05 382 aa3.28□□□□□ -1.88
RBM39-220ENST00000455343 IQANK1A0A1B0GTG1 560 aa3.28□□□□□ -1.88
RBM39-220ENST00000455343 TCRBV7S3A2A0A539 114 aa3.28□□□□□ -1.88
RBM39-220ENST00000455343 OR6C76A6NM76 312 aa3.28□□□□□ -1.88
RBM39-220ENST00000455343 ZNF785A8K8V0 405 aa3.28□□□□□ -1.88
RBM39-220ENST00000455343 F5H697 171 aa3.28□□□□□ -1.88
RBM39-220ENST00000455343 H0Y3Z8 333 aa3.28□□□□□ -1.88
RBM39-220ENST00000455343 TRIAP1O43715 76 aa3.28□□□□□ -1.88
RBM39-220ENST00000455343 LMX1BO60663 402 aa3.28□□□□□ -1.88
RBM39-220ENST00000455343 ICOSLGO75144 302 aa3.28□□□□□ -1.88
RBM39-220ENST00000455343 CBR3O75828 277 aa3.28□□□□□ -1.88
RBM39-220ENST00000455343 AIFM1O95831 613 aa3.28□□□□□ -1.88
RBM39-220ENST00000455343 HNRNPCP07910 306 aaKnown RBP eCLIP3.28□□□□□ -1.887e-7■□□□□ 9.6
RBM39-220ENST00000455343 RHOXF2BP0C7M4 288 aa3.28□□□□□ -1.88
RBM39-220ENST00000455343 C1GALT1C1LP0DN25 315 aa3.28□□□□□ -1.88
RBM39-220ENST00000455343 COX7A2P14406 83 aa3.28□□□□□ -1.88
RBM39-220ENST00000455343 NAGAP17050 411 aa3.28□□□□□ -1.88
RBM39-220ENST00000455343 SRD5A1P18405 259 aa3.28□□□□□ -1.88
RBM39-220ENST00000455343 TPSB2P20231 275 aa3.28□□□□□ -1.88
RBM39-220ENST00000455343 IL11P20809 199 aa3.28□□□□□ -1.88
RBM39-220ENST00000455343 IGFBP5P24593 272 aa3.28□□□□□ -1.88
RBM39-220ENST00000455343 ATP5A1P25705 553 aaKnown RBP3.28□□□□□ -1.88
RBM39-220ENST00000455343 CERS1P27544 350 aa3.28□□□□□ -1.88
RBM39-220ENST00000455343 GABRB3P28472 473 aa3.28□□□□□ -1.88
RBM39-220ENST00000455343 GALNSP34059 522 aa3.28□□□□□ -1.88
RBM39-220ENST00000455343 CDKN1AP38936 164 aa3.28□□□□□ -1.88
RBM39-220ENST00000455343 SLC1A2P43004 574 aa3.28□□□□□ -1.88
RBM39-220ENST00000455343 MSH2P43246 934 aa3.28□□□□□ -1.88
RBM39-220ENST00000455343 MAGEA6P43360 314 aa3.28□□□□□ -1.88
RBM39-220ENST00000455343 COMPP49747 757 aaPredicted RBP3.28□□□□□ -1.88
RBM39-220ENST00000455343 RGS4P49798 205 aa3.28□□□□□ -1.88
RBM39-220ENST00000455343 CASP9P55211 416 aa3.28□□□□□ -1.88
RBM39-220ENST00000455343 CDK16Q00536 496 aa3.28□□□□□ -1.88
RBM39-220ENST00000455343 ID2Q02363 134 aa3.28□□□□□ -1.88
RBM39-220ENST00000455343 SNTA1Q13424 505 aa3.28□□□□□ -1.88
RBM39-220ENST00000455343 E2F2Q14209 437 aa3.28□□□□□ -1.88
RBM39-220ENST00000455343 TPSAB1Q15661 275 aa3.28□□□□□ -1.88
RBM39-220ENST00000455343 PPP1R3AQ16821 1122 aa3.28□□□□□ -1.88
RBM39-220ENST00000455343 PGGHGQ32M88 737 aa3.28□□□□□ -1.88
RBM39-220ENST00000455343 PDLIM3Q53GG5 364 aaPredicted RBP3.28□□□□□ -1.88
RBM39-220ENST00000455343 MTX3Q5HYI7 312 aa3.28□□□□□ -1.88
RBM39-220ENST00000455343 LIPNQ5VXI9 398 aa3.28□□□□□ -1.88
RBM39-220ENST00000455343 ZNF626Q68DY1 528 aa3.28□□□□□ -1.88
RBM39-220ENST00000455343 OR2A2Q6IF42 318 aa3.28□□□□□ -1.88
RBM39-220ENST00000455343 SLC30A6Q6NXT4 461 aa3.28□□□□□ -1.88
RBM39-220ENST00000455343 TRIM40Q6P9F5 258 aa3.28□□□□□ -1.88
RBM39-220ENST00000455343 TMEM64Q6YI46 380 aa3.28□□□□□ -1.88
RBM39-220ENST00000455343 STAC2Q6ZMT1 411 aa3.28□□□□□ -1.88
RBM39-220ENST00000455343 SLC29A4Q7RTT9 530 aa3.28□□□□□ -1.88
RBM39-220ENST00000455343 TMPRSS11BQ86T26 416 aa3.28□□□□□ -1.88
RBM39-220ENST00000455343 DTX2Q86UW9 622 aa3.28□□□□□ -1.88
RBM39-220ENST00000455343 THOC6Q86W42 341 aaKnown RBP3.28□□□□□ -1.88
RBM39-220ENST00000455343 GRAMD2AQ8IUY3 354 aa3.28□□□□□ -1.88
RBM39-220ENST00000455343 OR4N5Q8IXE1 308 aa3.28□□□□□ -1.88
RBM39-220ENST00000455343 ST13P4Q8IZP2 240 aaPredicted RBP3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms