RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 CD226Q15762 336 aa10.09□□□□□ -0.79
SCN9A-205ENST00000454569 DECR1Q16698 335 aa10.09□□□□□ -0.79
SCN9A-205ENST00000454569 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.09□□□□□ -0.79
SCN9A-205ENST00000454569 ZNF311Q5JNZ3 666 aa10.09□□□□□ -0.79
SCN9A-205ENST00000454569 INTS11Q5TA45 600 aaKnown RBP10.09□□□□□ -0.79
SCN9A-205ENST00000454569 PRAMEF8Q5VWM4 474 aa10.09□□□□□ -0.79
SCN9A-205ENST00000454569 PRAMEF7Q5VXH5 474 aa10.09□□□□□ -0.79
SCN9A-205ENST00000454569 HMBOX1Q6NT76 420 aa10.09□□□□□ -0.79
SCN9A-205ENST00000454569 ZFP1Q6P2D0 407 aa10.09□□□□□ -0.79
SCN9A-205ENST00000454569 RPS19BP1Q86WX3 136 aaKnown RBP10.09□□□□□ -0.79
SCN9A-205ENST00000454569 KBTBD2Q8IY47 623 aa10.09□□□□□ -0.79
SCN9A-205ENST00000454569 GATSQ8NAP1 163 aa10.09□□□□□ -0.79
SCN9A-205ENST00000454569 ZNF248Q8NDW4 579 aa10.09□□□□□ -0.79
SCN9A-205ENST00000454569 OR5L2Q8NGL0 311 aa10.09□□□□□ -0.79
SCN9A-205ENST00000454569 HGDQ93099 445 aa10.09□□□□□ -0.79
SCN9A-205ENST00000454569 DUS3LQ96G46 650 aaKnown RBP10.09□□□□□ -0.79
SCN9A-205ENST00000454569 C7orf34Q96L11 122 aa10.09□□□□□ -0.79
SCN9A-205ENST00000454569 RNF145Q96MT1 663 aa10.09□□□□□ -0.79
SCN9A-205ENST00000454569 DOHHQ9BU89 302 aa10.09□□□□□ -0.79
SCN9A-205ENST00000454569 CCM2LQ9NUG4 571 aaPredicted RBP10.09□□□□□ -0.79
SCN9A-205ENST00000454569 ANKRD10Q9NXR5 420 aa10.09□□□□□ -0.79
SCN9A-205ENST00000454569 SEC14L3Q9UDX4 400 aa10.09□□□□□ -0.79
SCN9A-205ENST00000454569 ANAPC2Q9UJX6 822 aa10.09□□□□□ -0.79
SCN9A-205ENST00000454569 ZNF443Q9Y2A4 671 aaPredicted RBP10.09□□□□□ -0.79
SCN9A-205ENST00000454569 NTNG1Q9Y2I2 539 aa10.09□□□□□ -0.79
SCN9A-205ENST00000454569 A6NL46 340 aa10.08□□□□□ -0.8
SCN9A-205ENST00000454569 C1QTNF9BB2RNN3 333 aa10.08□□□□□ -0.8
SCN9A-205ENST00000454569 J3KTA2 159 aa10.08□□□□□ -0.8
SCN9A-205ENST00000454569 hCG_2039718K7EN88 272 aa10.08□□□□□ -0.8
SCN9A-205ENST00000454569 M0R3H8 397 aa10.08□□□□□ -0.8
SCN9A-205ENST00000454569 ACOX3O15254 700 aa10.08□□□□□ -0.8
SCN9A-205ENST00000454569 SUV39H1O43463 412 aa10.08□□□□□ -0.8
SCN9A-205ENST00000454569 FADS1O60427 444 aa10.08□□□□□ -0.8
SCN9A-205ENST00000454569 LILRA1O75019 489 aa10.08□□□□□ -0.8
SCN9A-205ENST00000454569 GMNNO75496 209 aa10.08□□□□□ -0.8
SCN9A-205ENST00000454569 AK1P00568 194 aa10.08□□□□□ -0.8
SCN9A-205ENST00000454569 C1QTNF9P0C862 333 aa10.08□□□□□ -0.8
SCN9A-205ENST00000454569 PRG2P13727 222 aa10.08□□□□□ -0.8
SCN9A-205ENST00000454569 ANPEPP15144 967 aa10.08□□□□□ -0.8
SCN9A-205ENST00000454569 ITPKBP27987 946 aa10.08□□□□□ -0.8
SCN9A-205ENST00000454569 YAP1P46937 504 aaKnown RBP10.08□□□□□ -0.8
SCN9A-205ENST00000454569 ATP12AP54707 1039 aa10.08□□□□□ -0.8
SCN9A-205ENST00000454569 CDC20Q12834 499 aa10.08□□□□□ -0.8
SCN9A-205ENST00000454569 PPP1R8Q12972 351 aaKnown RBP10.08□□□□□ -0.8
SCN9A-205ENST00000454569 NPTX1Q15818 432 aa10.08□□□□□ -0.8
SCN9A-205ENST00000454569 ZNF141Q15928 474 aa10.08□□□□□ -0.8
SCN9A-205ENST00000454569 ZNF791Q3KP31 576 aaPredicted RBP10.08□□□□□ -0.8
SCN9A-205ENST00000454569 KLHL26Q53HC5 615 aa10.08□□□□□ -0.8
SCN9A-205ENST00000454569 IL20RBQ6UXL0 311 aa10.08□□□□□ -0.8
SCN9A-205ENST00000454569 ZNF227Q86WZ6 799 aa10.08□□□□□ -0.8
SCN9A-205ENST00000454569 SLC30A8Q8IWU4 369 aa10.08□□□□□ -0.8
SCN9A-205ENST00000454569 SPACA3Q8IXA5 215 aa10.08□□□□□ -0.8
SCN9A-205ENST00000454569 ARMC10Q8N2F6 343 aa10.08□□□□□ -0.8
SCN9A-205ENST00000454569 PAPD5Q8NDF8 572 aaKnown RBP10.08□□□□□ -0.8
SCN9A-205ENST00000454569 VANGL1Q8TAA9 524 aaPredicted RBP10.08□□□□□ -0.8
SCN9A-205ENST00000454569 CNOT9Q92600 299 aaKnown RBP10.08□□□□□ -0.8
SCN9A-205ENST00000454569 SLC47A1Q96FL8 570 aa10.08□□□□□ -0.8
SCN9A-205ENST00000454569 CCNL2Q96S94 520 aaPredicted RBP10.08□□□□□ -0.8
SCN9A-205ENST00000454569 ZNF607Q96SK3 696 aa10.08□□□□□ -0.8
SCN9A-205ENST00000454569 AMBRA1Q9C0C7 1298 aa10.08□□□□□ -0.8
SCN9A-205ENST00000454569 ATP13A2Q9NQ11 1180 aa10.08□□□□□ -0.8
SCN9A-205ENST00000454569 CALML5Q9NZT1 146 aa10.08□□□□□ -0.8
SCN9A-205ENST00000454569 STOML1Q9UBI4 398 aa10.08□□□□□ -0.8
SCN9A-205ENST00000454569 ABCG2Q9UNQ0 655 aa10.08□□□□□ -0.8
SCN9A-205ENST00000454569 SH3GLB1Q9Y371 365 aa10.08□□□□□ -0.8
SCN9A-205ENST00000454569 CACNA1GO43497 2377 aa10.08□□□□□ -0.8
SCN9A-205ENST00000454569 PPM1BO75688 479 aa10.07□□□□□ -0.8
SCN9A-205ENST00000454569 WISP1O95388 367 aa10.07□□□□□ -0.8
SCN9A-205ENST00000454569 OXSR1O95747 527 aaPredicted RBP10.07□□□□□ -0.8
SCN9A-205ENST00000454569 BAG2O95816 211 aa10.07□□□□□ -0.8
SCN9A-205ENST00000454569 LGI1O95970 557 aa10.07□□□□□ -0.8
SCN9A-205ENST00000454569 GKN3PP0CG01 181 aa10.07□□□□□ -0.8
SCN9A-205ENST00000454569 ICAM2P13598 275 aa10.07□□□□□ -0.8
SCN9A-205ENST00000454569 IL7RP16871 459 aa10.07□□□□□ -0.8
SCN9A-205ENST00000454569 ATP6V1C1P21283 382 aa10.07□□□□□ -0.8
SCN9A-205ENST00000454569 ITGA3P26006 1051 aa10.07□□□□□ -0.8
SCN9A-205ENST00000454569 SLC7A1P30825 629 aa10.07□□□□□ -0.8
SCN9A-205ENST00000454569 PTGDSP41222 190 aa10.07□□□□□ -0.8
SCN9A-205ENST00000454569 PNLIPRP2P54317 469 aa10.07□□□□□ -0.8
SCN9A-205ENST00000454569 HPCAP84074 193 aa10.07□□□□□ -0.8
SCN9A-205ENST00000454569 SLC34A1Q06495 639 aa10.07□□□□□ -0.8
SCN9A-205ENST00000454569 GNA13Q14344 377 aa10.07□□□□□ -0.8
SCN9A-205ENST00000454569 INPP5JQ15735 1006 aaPredicted RBP10.07□□□□□ -0.8
SCN9A-205ENST00000454569 DEFB109BQ30KR1 87 aa10.07□□□□□ -0.8
SCN9A-205ENST00000454569 MRPL2Q5T653 305 aaKnown RBP10.07□□□□□ -0.8
SCN9A-205ENST00000454569 FNDC7Q5VTL7 733 aa10.07□□□□□ -0.8
SCN9A-205ENST00000454569 FKBP9P1Q75LS8 142 aa10.07□□□□□ -0.8
SCN9A-205ENST00000454569 MARCH3Q86UD3 253 aa10.07□□□□□ -0.8
SCN9A-205ENST00000454569 EID3Q8N140 333 aa10.07□□□□□ -0.8
SCN9A-205ENST00000454569 BEST3Q8N1M1 668 aa10.07□□□□□ -0.8
SCN9A-205ENST00000454569 ZNF614Q8N883 585 aa10.07□□□□□ -0.8
SCN9A-205ENST00000454569 OR10G3Q8NGC4 313 aa10.07□□□□□ -0.8
SCN9A-205ENST00000454569 GRHL3Q8TE85 626 aa10.07□□□□□ -0.8
SCN9A-205ENST00000454569 LRTOMTQ8WZ04 291 aa10.07□□□□□ -0.8
SCN9A-205ENST00000454569 PKP2Q99959 881 aa10.07□□□□□ -0.8
SCN9A-205ENST00000454569 G6PC3Q9BUM1 346 aa10.07□□□□□ -0.8
SCN9A-205ENST00000454569 EFHD1Q9BUP0 239 aa10.07□□□□□ -0.8
SCN9A-205ENST00000454569 CHID1Q9BWS9 393 aa10.07□□□□□ -0.8
SCN9A-205ENST00000454569 CCDC86Q9H6F5 360 aaKnown RBP10.07□□□□□ -0.8
SCN9A-205ENST00000454569 POLE3Q9NRF9 147 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms