RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 USP22Q9UPT9 525 aa11.35□□□□□ -0.59
SEC16A-207ENST00000453963 USP3Q9Y6I4 520 aa11.35□□□□□ -0.59
SEC16A-207ENST00000453963 ADAMTSL3P82987 1691 aa11.35□□□□□ -0.59
SEC16A-207ENST00000453963 CCDC88AQ3V6T2 1871 aa11.35□□□□□ -0.59
SEC16A-207ENST00000453963 MYO18AQ92614 2054 aaKnown RBP11.35□□□□□ -0.59
SEC16A-207ENST00000453963 METTL15A6NJ78 407 aa11.35□□□□□ -0.59
SEC16A-207ENST00000453963 GPR89AB7ZAQ6 455 aa11.35□□□□□ -0.59
SEC16A-207ENST00000453963 KCNJ13O60928 360 aa11.35□□□□□ -0.59
SEC16A-207ENST00000453963 GPR89BP0CG08 455 aa11.35□□□□□ -0.59
SEC16A-207ENST00000453963 PGCP20142 388 aa11.35□□□□□ -0.59
SEC16A-207ENST00000453963 PTPN6P29350 595 aa11.35□□□□□ -0.59
SEC16A-207ENST00000453963 RBMS1P29558 406 aaKnown RBP11.35□□□□□ -0.59
SEC16A-207ENST00000453963 RAP2BP61225 183 aa11.35□□□□□ -0.59
SEC16A-207ENST00000453963 MRPL49Q13405 166 aaKnown RBP11.35□□□□□ -0.59
SEC16A-207ENST00000453963 CCINQ13939 588 aa11.35□□□□□ -0.59
SEC16A-207ENST00000453963 C3orf33Q6P1S2 294 aa11.35□□□□□ -0.59
SEC16A-207ENST00000453963 RNF111Q6ZNA4 994 aa11.35□□□□□ -0.59
SEC16A-207ENST00000453963 LYSMD2Q8IV50 215 aa11.35□□□□□ -0.59
SEC16A-207ENST00000453963 BEST4Q8NFU0 473 aa11.35□□□□□ -0.59
SEC16A-207ENST00000453963 OR13C3Q8NGS6 347 aa11.35□□□□□ -0.59
SEC16A-207ENST00000453963 TCTEX1D2Q8WW35 142 aa11.35□□□□□ -0.59
SEC16A-207ENST00000453963 MR1Q95460 341 aa11.35□□□□□ -0.59
SEC16A-207ENST00000453963 DDX31Q9H8H2 851 aaKnown RBP11.35□□□□□ -0.59
SEC16A-207ENST00000453963 KIF13AQ9H1H9 1805 aa11.35□□□□□ -0.59
SEC16A-207ENST00000453963 IGLON5A6NGN9 336 aa11.35□□□□□ -0.59
SEC16A-207ENST00000453963 NPIPB15A6NHN6 443 aaPredicted RBP11.35□□□□□ -0.59
SEC16A-207ENST00000453963 IFNA5P01569 189 aa11.35□□□□□ -0.59
SEC16A-207ENST00000453963 ARAFP10398 606 aa11.35□□□□□ -0.59
SEC16A-207ENST00000453963 CD70P32970 193 aa11.35□□□□□ -0.59
SEC16A-207ENST00000453963 PBX2P40425 430 aa11.35□□□□□ -0.59
SEC16A-207ENST00000453963 PRPS1P60891 318 aa11.35□□□□□ -0.59
SEC16A-207ENST00000453963 PLCXD2Q0VAA5 305 aa11.35□□□□□ -0.59
SEC16A-207ENST00000453963 TUBB3Q13509 450 aa11.35□□□□□ -0.59
SEC16A-207ENST00000453963 GGTA1PQ4G0N0 100 aa11.35□□□□□ -0.59
SEC16A-207ENST00000453963 TP53I3Q53FA7 332 aa11.35□□□□□ -0.59
SEC16A-207ENST00000453963 MTFR2Q6P444 385 aa11.35□□□□□ -0.59
SEC16A-207ENST00000453963 FAM83HQ6ZRV2 1179 aaPredicted RBP11.35□□□□□ -0.59
SEC16A-207ENST00000453963 TMEM150AQ86TG1 271 aa11.35□□□□□ -0.59
SEC16A-207ENST00000453963 GPR26Q8NDV2 337 aa11.35□□□□□ -0.59
SEC16A-207ENST00000453963 ADAMTS16Q8TE57 1224 aa11.35□□□□□ -0.59
SEC16A-207ENST00000453963 GPR174Q9BXC1 333 aa11.35□□□□□ -0.59
SEC16A-207ENST00000453963 C1QTNF2Q9BXJ5 285 aa11.35□□□□□ -0.59
SEC16A-207ENST00000453963 SYNPO2LQ9H987 977 aa11.35□□□□□ -0.59
SEC16A-207ENST00000453963 SIAEQ9HAT2 523 aa11.35□□□□□ -0.59
SEC16A-207ENST00000453963 ASF1BQ9NVP2 202 aa11.35□□□□□ -0.59
SEC16A-207ENST00000453963 C5AR2Q9P296 337 aa11.35□□□□□ -0.59
SEC16A-207ENST00000453963 NPIPA2E9PIF3 369 aa11.35□□□□□ -0.59
SEC16A-207ENST00000453963 NPIPA3F8WFD2 350 aa11.35□□□□□ -0.59
SEC16A-207ENST00000453963 SCG5P05408 212 aa11.35□□□□□ -0.59
SEC16A-207ENST00000453963 C6P13671 934 aa11.35□□□□□ -0.59
SEC16A-207ENST00000453963 ZNF16P17020 682 aaPredicted RBP11.35□□□□□ -0.59
SEC16A-207ENST00000453963 TM4SF4P48230 202 aa11.35□□□□□ -0.59
SEC16A-207ENST00000453963 PODNL1Q6PEZ8 512 aa11.35□□□□□ -0.59
SEC16A-207ENST00000453963 Q6ZSR9 355 aa11.35□□□□□ -0.59
SEC16A-207ENST00000453963 DNAJC5GQ8N7S2 189 aa11.35□□□□□ -0.59
SEC16A-207ENST00000453963 ZNF709Q8N972 641 aa11.35□□□□□ -0.59
SEC16A-207ENST00000453963 OR56B4Q8NH76 319 aa11.35□□□□□ -0.59
SEC16A-207ENST00000453963 GPR148Q8TDV2 347 aa11.35□□□□□ -0.59
SEC16A-207ENST00000453963 TMEM239Q8WW34 195 aa11.35□□□□□ -0.59
SEC16A-207ENST00000453963 NEIL2Q969S2 332 aa11.35□□□□□ -0.59
SEC16A-207ENST00000453963 WDR77Q9BQA1 342 aaPredicted RBP11.35□□□□□ -0.59
SEC16A-207ENST00000453963 SLC7A7Q9UM01 511 aa11.35□□□□□ -0.59
SEC16A-207ENST00000453963 SLC7A11Q9UPY5 501 aa11.35□□□□□ -0.59
SEC16A-207ENST00000453963 HIF3AQ9Y2N7 669 aa11.35□□□□□ -0.59
SEC16A-207ENST00000453963 ACTL7AQ9Y615 435 aa11.35□□□□□ -0.59
SEC16A-207ENST00000453963 DNMT3AQ9Y6K1 912 aaPredicted RBP11.35□□□□□ -0.59
SEC16A-207ENST00000453963 MYH1P12882 1939 aa11.35□□□□□ -0.59
SEC16A-207ENST00000453963 MYH4Q9Y623 1939 aa11.35□□□□□ -0.59
SEC16A-207ENST00000453963 AKAIN1P0CW23 69 aa11.34□□□□□ -0.59
SEC16A-207ENST00000453963 GNRHRP30968 328 aa11.34□□□□□ -0.59
SEC16A-207ENST00000453963 GABRA5P31644 462 aa11.34□□□□□ -0.59
SEC16A-207ENST00000453963 MGAT3Q09327 533 aa11.34□□□□□ -0.59
SEC16A-207ENST00000453963 OXA1LQ15070 435 aa11.34□□□□□ -0.59
SEC16A-207ENST00000453963 CST6Q15828 149 aa11.34□□□□□ -0.59
SEC16A-207ENST00000453963 KRBOX4Q5JUW0 171 aa11.34□□□□□ -0.59
SEC16A-207ENST00000453963 CTSL3PQ5NE16 218 aa11.34□□□□□ -0.59
SEC16A-207ENST00000453963 ZER1Q7Z7L7 766 aa11.34□□□□□ -0.59
SEC16A-207ENST00000453963 CSNK1A1LQ8N752 337 aa11.34□□□□□ -0.59
SEC16A-207ENST00000453963 OR8J2Q8NGG1 315 aa11.34□□□□□ -0.59
SEC16A-207ENST00000453963 PITHD1Q9GZP4 211 aaPredicted RBP11.34□□□□□ -0.59
SEC16A-207ENST00000453963 APMAPQ9HDC9 416 aa11.34□□□□□ -0.59
SEC16A-207ENST00000453963 HMX2A2RU54 273 aa11.34□□□□□ -0.59
SEC16A-207ENST00000453963 SULT1C2O00338 296 aa11.34□□□□□ -0.59
SEC16A-207ENST00000453963 SCO2O43819 266 aa11.34□□□□□ -0.59
SEC16A-207ENST00000453963 CDC123O75794 336 aaPredicted RBP11.34□□□□□ -0.59
SEC16A-207ENST00000453963 TGM6O95932 706 aa11.34□□□□□ -0.59
SEC16A-207ENST00000453963 IFNA1P01562 189 aa11.34□□□□□ -0.59
SEC16A-207ENST00000453963 CAMLGP49069 296 aa11.34□□□□□ -0.59
SEC16A-207ENST00000453963 SGCAQ16586 387 aa11.34□□□□□ -0.59
SEC16A-207ENST00000453963 PLK5Q496M5 336 aa11.34□□□□□ -0.59
SEC16A-207ENST00000453963 FAM205BPQ63HN1 556 aa11.34□□□□□ -0.59
SEC16A-207ENST00000453963 SLC39A11Q8N1S5 342 aa11.34□□□□□ -0.59
SEC16A-207ENST00000453963 CDRT4Q8N9R6 151 aa11.34□□□□□ -0.59
SEC16A-207ENST00000453963 CYB561A3Q8NBI2 242 aa11.34□□□□□ -0.59
SEC16A-207ENST00000453963 TMEM185AQ8NFB2 350 aa11.34□□□□□ -0.59
SEC16A-207ENST00000453963 OR14K1Q8NGZ2 314 aa11.34□□□□□ -0.59
SEC16A-207ENST00000453963 MSLNLQ96KJ4 702 aa11.34□□□□□ -0.59
SEC16A-207ENST00000453963 ZNF587Q96SQ5 575 aaPredicted RBP11.34□□□□□ -0.59
SEC16A-207ENST00000453963 OR6C2Q9NZP2 312 aa11.34□□□□□ -0.59
SEC16A-207ENST00000453963 PIAS3Q9Y6X2 628 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms