RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 ZNF770Q6IQ21 691 aaPredicted RBP12.99□□□□□ -0.33
UBE2D3-210ENST00000453744 ZNF322Q6U7Q0 402 aaPredicted RBP12.99□□□□□ -0.33
UBE2D3-210ENST00000453744 C3P1Q6ZMU1 363 aa12.99□□□□□ -0.33
UBE2D3-210ENST00000453744 CPA6Q8N4T0 437 aa12.99□□□□□ -0.33
UBE2D3-210ENST00000453744 OR8D4Q8NGM9 314 aa12.99□□□□□ -0.33
UBE2D3-210ENST00000453744 SENP5Q96HI0 755 aaPredicted RBP12.99□□□□□ -0.33
UBE2D3-210ENST00000453744 CD93Q9NPY3 652 aa12.99□□□□□ -0.33
UBE2D3-210ENST00000453744 SEMA4GQ9NTN9 838 aa12.99□□□□□ -0.33
UBE2D3-210ENST00000453744 TAS2R10Q9NYW0 307 aa12.99□□□□□ -0.33
UBE2D3-210ENST00000453744 NLGN3Q9NZ94 848 aa12.99□□□□□ -0.33
UBE2D3-210ENST00000453744 IL36AQ9UHA7 158 aa12.99□□□□□ -0.33
UBE2D3-210ENST00000453744 SLC7A7Q9UM01 511 aa12.99□□□□□ -0.33
UBE2D3-210ENST00000453744 WDR45Q9Y484 360 aa12.99□□□□□ -0.33
UBE2D3-210ENST00000453744 BPTFQ12830 3046 aa12.99□□□□□ -0.33
UBE2D3-210ENST00000453744 PSME4Q14997 1843 aa12.99□□□□□ -0.33
UBE2D3-210ENST00000453744 DICER1Q9UPY3 1922 aaKnown RBP12.98□□□□□ -0.33
UBE2D3-210ENST00000453744 A0A1W2PRQ8 180 aa12.98□□□□□ -0.33
UBE2D3-210ENST00000453744 SHISA3A0PJX4 238 aa12.98□□□□□ -0.33
UBE2D3-210ENST00000453744 GLTPD2A6NH11 291 aa12.98□□□□□ -0.33
UBE2D3-210ENST00000453744 K7ESM1 405 aa12.98□□□□□ -0.33
UBE2D3-210ENST00000453744 SLC8B1Q6J4K2 584 aa12.98□□□□□ -0.33
UBE2D3-210ENST00000453744 C19orf48Q6RUI8 117 aa12.98□□□□□ -0.33
UBE2D3-210ENST00000453744 NUP43Q8NFH3 380 aa12.98□□□□□ -0.33
UBE2D3-210ENST00000453744 OR2A12Q8NGT7 310 aa12.98□□□□□ -0.33
UBE2D3-210ENST00000453744 PXYLP1Q8TE99 480 aa12.98□□□□□ -0.33
UBE2D3-210ENST00000453744 TMEM255BQ8WV15 326 aa12.98□□□□□ -0.33
UBE2D3-210ENST00000453744 IGSF21Q96ID5 467 aa12.98□□□□□ -0.33
UBE2D3-210ENST00000453744 SFXN2Q96NB2 322 aa12.98□□□□□ -0.33
UBE2D3-210ENST00000453744 PPA2Q9H2U2 334 aa12.98□□□□□ -0.33
UBE2D3-210ENST00000453744 GLIPR2Q9H4G4 154 aa12.98□□□□□ -0.33
UBE2D3-210ENST00000453744 A0A1B0GVT2 93 aa12.98□□□□□ -0.33
UBE2D3-210ENST00000453744 FOXE1O00358 373 aaPredicted RBP12.98□□□□□ -0.33
UBE2D3-210ENST00000453744 TMPRSS11DO60235 418 aa12.98□□□□□ -0.33
UBE2D3-210ENST00000453744 SPDEFO95238 335 aa12.98□□□□□ -0.33
UBE2D3-210ENST00000453744 SIX6O95475 246 aa12.98□□□□□ -0.33
UBE2D3-210ENST00000453744 M6PRP20645 277 aa12.98□□□□□ -0.33
UBE2D3-210ENST00000453744 HOXC8P31273 242 aa12.98□□□□□ -0.33
UBE2D3-210ENST00000453744 PSMB10P40306 273 aa12.98□□□□□ -0.33
UBE2D3-210ENST00000453744 TAS2R38P59533 333 aa12.98□□□□□ -0.33
UBE2D3-210ENST00000453744 TSPAN31Q12999 210 aa12.98□□□□□ -0.33
UBE2D3-210ENST00000453744 CCNJQ5T5M9 372 aa12.98□□□□□ -0.33
UBE2D3-210ENST00000453744 OR11H4Q8NGC9 324 aa12.98□□□□□ -0.33
UBE2D3-210ENST00000453744 ST8SIA2Q92186 375 aa12.98□□□□□ -0.33
UBE2D3-210ENST00000453744 GPN1Q9HCN4 374 aaPredicted RBP12.98□□□□□ -0.33
UBE2D3-210ENST00000453744 COPS3Q9UNS2 423 aa12.98□□□□□ -0.33
UBE2D3-210ENST00000453744 ASB4Q9Y574 426 aa12.98□□□□□ -0.33
UBE2D3-210ENST00000453744 BRCA1P38398 1863 aaKnown RBP12.98□□□□□ -0.33
UBE2D3-210ENST00000453744 TIMP2P16035 220 aa12.98□□□□□ -0.33
UBE2D3-210ENST00000453744 CFL1P23528 166 aaKnown RBP12.98□□□□□ -0.33
UBE2D3-210ENST00000453744 RPL35P42766 123 aaKnown RBP12.98□□□□□ -0.33
UBE2D3-210ENST00000453744 MAPK9P45984 424 aa12.98□□□□□ -0.33
UBE2D3-210ENST00000453744 PXNP49023 591 aaPredicted RBP12.98□□□□□ -0.33
UBE2D3-210ENST00000453744 OR12D2P58182 307 aa12.98□□□□□ -0.33
UBE2D3-210ENST00000453744 CDKN3Q16667 212 aa12.98□□□□□ -0.33
UBE2D3-210ENST00000453744 TMEM44Q2T9K0 475 aa12.98□□□□□ -0.33
UBE2D3-210ENST00000453744 ENTPD8Q5MY95 495 aa12.98□□□□□ -0.33
UBE2D3-210ENST00000453744 ASB12Q8WXK4 309 aa12.98□□□□□ -0.33
UBE2D3-210ENST00000453744 NUS1Q96E22 293 aa12.98□□□□□ -0.33
UBE2D3-210ENST00000453744 ZMYND19Q96E35 227 aaPredicted RBP12.98□□□□□ -0.33
UBE2D3-210ENST00000453744 SLC41A3Q96GZ6 507 aa12.98□□□□□ -0.33
UBE2D3-210ENST00000453744 A4GALTQ9NPC4 353 aa12.98□□□□□ -0.33
UBE2D3-210ENST00000453744 ADAMTS4O75173 837 aa12.97□□□□□ -0.33
UBE2D3-210ENST00000453744 CHRM4P08173 479 aa12.97□□□□□ -0.33
UBE2D3-210ENST00000453744 WASP42768 502 aa12.97□□□□□ -0.33
UBE2D3-210ENST00000453744 HCCSP53701 268 aa12.97□□□□□ -0.33
UBE2D3-210ENST00000453744 LRRC37A5PQ49AS3 106 aa12.97□□□□□ -0.33
UBE2D3-210ENST00000453744 TMEM201Q5SNT2 666 aa12.97□□□□□ -0.33
UBE2D3-210ENST00000453744 CAMKMTQ7Z624 323 aa12.97□□□□□ -0.33
UBE2D3-210ENST00000453744 PRDM9Q9NQV7 894 aa12.97□□□□□ -0.33
UBE2D3-210ENST00000453744 USP36Q9P275 1121 aaKnown RBP12.97□□□□□ -0.33
UBE2D3-210ENST00000453744 RALGAPA2Q2PPJ7 1873 aa12.97□□□□□ -0.33
UBE2D3-210ENST00000453744 OR6C74A6NCV1 312 aa12.97□□□□□ -0.33
UBE2D3-210ENST00000453744 FAM25EA8MYX2 175 aa12.97□□□□□ -0.33
UBE2D3-210ENST00000453744 RPN2P04844 631 aa12.97□□□□□ -0.33
UBE2D3-210ENST00000453744 C8AP07357 584 aa12.97□□□□□ -0.33
UBE2D3-210ENST00000453744 MPIP34949 423 aa12.97□□□□□ -0.33
UBE2D3-210ENST00000453744 BTG1P62324 171 aa12.97□□□□□ -0.33
UBE2D3-210ENST00000453744 FGL2Q14314 439 aa12.97□□□□□ -0.33
UBE2D3-210ENST00000453744 FAM198BQ6UWH4 519 aa12.97□□□□□ -0.33
UBE2D3-210ENST00000453744 AMER3Q8N944 861 aa12.97□□□□□ -0.33
UBE2D3-210ENST00000453744 KCT2Q8NC54 265 aa12.97□□□□□ -0.33
UBE2D3-210ENST00000453744 GOT1L1Q8NHS2 421 aaPredicted RBP12.97□□□□□ -0.33
UBE2D3-210ENST00000453744 MED18Q9BUE0 208 aa12.97□□□□□ -0.33
UBE2D3-210ENST00000453744 AUNIPQ9H7T9 357 aa12.97□□□□□ -0.33
UBE2D3-210ENST00000453744 EMC7Q9NPA0 242 aa12.97□□□□□ -0.33
UBE2D3-210ENST00000453744 CCL26Q9Y258 94 aa12.97□□□□□ -0.33
UBE2D3-210ENST00000453744 MYOFQ9NZM1 2061 aa12.97□□□□□ -0.33
UBE2D3-210ENST00000453744 GPR171O14626 319 aa12.97□□□□□ -0.33
UBE2D3-210ENST00000453744 SEMA7AO75326 666 aa12.97□□□□□ -0.33
UBE2D3-210ENST00000453744 UCHL1P09936 223 aa12.97□□□□□ -0.33
UBE2D3-210ENST00000453744 ENPP1P22413 925 aa12.97□□□□□ -0.33
UBE2D3-210ENST00000453744 PSMA3P25788 255 aa12.97□□□□□ -0.33
UBE2D3-210ENST00000453744 GDNFP39905 211 aa12.97□□□□□ -0.33
UBE2D3-210ENST00000453744 PRLHRP49683 370 aa12.97□□□□□ -0.33
UBE2D3-210ENST00000453744 C6orf132Q5T0Z8 1188 aa12.97□□□□□ -0.33
UBE2D3-210ENST00000453744 FAM122CQ6P4D5 195 aa12.97□□□□□ -0.33
UBE2D3-210ENST00000453744 LIPIQ6XZB0 460 aa12.97□□□□□ -0.33
UBE2D3-210ENST00000453744 OR9A2Q8NGT5 310 aa12.97□□□□□ -0.33
UBE2D3-210ENST00000453744 CXorf40AQ8TE69 158 aa12.97□□□□□ -0.33
UBE2D3-210ENST00000453744 ST8SIA4Q92187 359 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms