RNA–Protein interactions for RNA: ENST00000449850.1

KDM1B-202, Transcript of lysine demethylase 1B, humanhuman

TSL 5

Gene KDM1B, Length 2,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1B-202ENST00000449850 RAD23AP54725 363 aa11.09□□□□□ -0.63
KDM1B-202ENST00000449850 HOXC5Q00444 222 aa11.09□□□□□ -0.63
KDM1B-202ENST00000449850 EIF3IQ13347 325 aaKnown RBP11.09□□□□□ -0.63
KDM1B-202ENST00000449850 PIN1Q13526 163 aaPredicted RBP11.09□□□□□ -0.63
KDM1B-202ENST00000449850 LARS2Q15031 903 aaKnown RBP11.09□□□□□ -0.63
KDM1B-202ENST00000449850 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.09□□□□□ -0.63
KDM1B-202ENST00000449850 PDZK1Q5T2W1 519 aa11.09□□□□□ -0.63
KDM1B-202ENST00000449850 TTC23Q5W5X9 447 aa11.09□□□□□ -0.63
KDM1B-202ENST00000449850 CYP4Z1Q86W10 505 aa11.09□□□□□ -0.63
KDM1B-202ENST00000449850 MARCH9Q86YJ5 346 aa11.09□□□□□ -0.63
KDM1B-202ENST00000449850 C8orf59Q8N0T1 100 aaPredicted RBP11.09□□□□□ -0.63
KDM1B-202ENST00000449850 ZNF441Q8N8Z8 693 aa11.09□□□□□ -0.63
KDM1B-202ENST00000449850 OR4C3Q8NH37 302 aa11.09□□□□□ -0.63
KDM1B-202ENST00000449850 PMM1Q92871 262 aa11.09□□□□□ -0.63
KDM1B-202ENST00000449850 EFHD2Q96C19 240 aaPredicted RBP11.09□□□□□ -0.63
KDM1B-202ENST00000449850 NRBF2Q96F24 287 aa11.09□□□□□ -0.63
KDM1B-202ENST00000449850 DHRS1Q96LJ7 313 aa11.09□□□□□ -0.63
KDM1B-202ENST00000449850 GAL3ST4Q96RP7 486 aa11.09□□□□□ -0.63
KDM1B-202ENST00000449850 WWTR1Q9GZV5 400 aa11.09□□□□□ -0.63
KDM1B-202ENST00000449850 ING2Q9H160 280 aa11.09□□□□□ -0.63
KDM1B-202ENST00000449850 LIN28AQ9H9Z2 209 aaKnown RBP11.09□□□□□ -0.63
KDM1B-202ENST00000449850 NMNAT1Q9HAN9 279 aaPredicted RBP11.09□□□□□ -0.63
KDM1B-202ENST00000449850 COPS7AQ9UBW8 275 aa11.09□□□□□ -0.63
KDM1B-202ENST00000449850 GPN3Q9UHW5 284 aaPredicted RBP11.09□□□□□ -0.63
KDM1B-202ENST00000449850 FAM32AQ9Y421 112 aaKnown RBP11.09□□□□□ -0.63
KDM1B-202ENST00000449850 CDHR4A6H8M9 788 aa11.09□□□□□ -0.63
KDM1B-202ENST00000449850 TM4SF5O14894 197 aa11.09□□□□□ -0.63
KDM1B-202ENST00000449850 CDK4P11802 303 aa11.09□□□□□ -0.63
KDM1B-202ENST00000449850 CYP4B1P13584 511 aa11.09□□□□□ -0.63
KDM1B-202ENST00000449850 PAX7P23759 505 aa11.09□□□□□ -0.63
KDM1B-202ENST00000449850 ZNF136P52737 540 aa11.09□□□□□ -0.63
KDM1B-202ENST00000449850 LIMK1P53667 647 aa11.09□□□□□ -0.63
KDM1B-202ENST00000449850 NR1H2P55055 460 aa11.09□□□□□ -0.63
KDM1B-202ENST00000449850 FOXD4Q12950 439 aaPredicted RBP11.09□□□□□ -0.63
KDM1B-202ENST00000449850 TARDBPQ13148 414 aaKnown RBP eCLIP11.09□□□□□ -0.63
KDM1B-202ENST00000449850 EXOC3L2Q2M3D2 409 aa11.09□□□□□ -0.63
KDM1B-202ENST00000449850 MRPL2Q5T653 305 aaKnown RBP11.09□□□□□ -0.63
KDM1B-202ENST00000449850 DESI1Q6ICB0 168 aa11.09□□□□□ -0.63
KDM1B-202ENST00000449850 C6orf15Q6UXA7 325 aaPredicted RBP11.09□□□□□ -0.63
KDM1B-202ENST00000449850 OR2Y1Q8NGV0 311 aa11.09□□□□□ -0.63
KDM1B-202ENST00000449850 WDR36Q8NI36 951 aaKnown RBP11.09□□□□□ -0.63
KDM1B-202ENST00000449850 G6PC3Q9BUM1 346 aa11.09□□□□□ -0.63
KDM1B-202ENST00000449850 RIBC2Q9H4K1 309 aa11.09□□□□□ -0.63
KDM1B-202ENST00000449850 CTPS2Q9NRF8 586 aa11.09□□□□□ -0.63
KDM1B-202ENST00000449850 PADI1Q9ULC6 663 aa11.09□□□□□ -0.63
KDM1B-202ENST00000449850 ZNF232Q9UNY5 417 aa11.09□□□□□ -0.63
KDM1B-202ENST00000449850 PTRH2Q9Y3E5 179 aaKnown RBP11.09□□□□□ -0.63
KDM1B-202ENST00000449850 PCDHGA10Q9Y5H3 936 aa11.09□□□□□ -0.63
KDM1B-202ENST00000449850 LOC102723996A0A087X1L8 192 aa11.08□□□□□ -0.64
KDM1B-202ENST00000449850 SMIM31A0A1B0GVY4 71 aa11.08□□□□□ -0.64
KDM1B-202ENST00000449850 OR6C76A6NM76 312 aa11.08□□□□□ -0.64
KDM1B-202ENST00000449850 PCDH17O14917 1159 aa11.08□□□□□ -0.64
KDM1B-202ENST00000449850 GADD45GO95257 159 aa11.08□□□□□ -0.64
KDM1B-202ENST00000449850 PRG2P13727 222 aa11.08□□□□□ -0.64
KDM1B-202ENST00000449850 NR0B1P51843 470 aaKnown RBP11.08□□□□□ -0.64
KDM1B-202ENST00000449850 RNF4P78317 190 aa11.08□□□□□ -0.64
KDM1B-202ENST00000449850 ZNF141Q15928 474 aa11.08□□□□□ -0.64
KDM1B-202ENST00000449850 RFX4Q33E94 735 aa11.08□□□□□ -0.64
KDM1B-202ENST00000449850 ATG16L2Q8NAA4 619 aa11.08□□□□□ -0.64
KDM1B-202ENST00000449850 ARSGQ96EG1 525 aa11.08□□□□□ -0.64
KDM1B-202ENST00000449850 LPAR4Q99677 370 aa11.08□□□□□ -0.64
KDM1B-202ENST00000449850 MAN2C1Q9NTJ4 1040 aa11.08□□□□□ -0.64
KDM1B-202ENST00000449850 FLRT3Q9NZU0 649 aa11.08□□□□□ -0.64
KDM1B-202ENST00000449850 NTNG1Q9Y2I2 539 aa11.08□□□□□ -0.64
KDM1B-202ENST00000449850 HS3ST3B1Q9Y662 390 aa11.08□□□□□ -0.64
KDM1B-202ENST00000449850 LOC100130705A0A1B0GUX0 176 aa11.08□□□□□ -0.64
KDM1B-202ENST00000449850 TMEM200CA6NKL6 621 aa11.08□□□□□ -0.64
KDM1B-202ENST00000449850 ADAM11O75078 769 aa11.08□□□□□ -0.64
KDM1B-202ENST00000449850 IL33O95760 270 aa11.08□□□□□ -0.64
KDM1B-202ENST00000449850 GKN3PP0CG01 181 aa11.08□□□□□ -0.64
KDM1B-202ENST00000449850 POLR2IP36954 125 aaKnown RBP11.08□□□□□ -0.64
KDM1B-202ENST00000449850 ATP12AP54707 1039 aa11.08□□□□□ -0.64
KDM1B-202ENST00000449850 SLC26A5P58743 744 aa11.08□□□□□ -0.64
KDM1B-202ENST00000449850 DCAF7P61962 342 aa11.08□□□□□ -0.64
KDM1B-202ENST00000449850 RPS18P62269 152 aaKnown RBP11.08□□□□□ -0.64
KDM1B-202ENST00000449850 PCOLCEQ15113 449 aa11.08□□□□□ -0.64
KDM1B-202ENST00000449850 DECR1Q16698 335 aa11.08□□□□□ -0.64
KDM1B-202ENST00000449850 MICAQ29983 383 aa11.08□□□□□ -0.64
KDM1B-202ENST00000449850 CNPY1Q3B7I2 92 aa11.08□□□□□ -0.64
KDM1B-202ENST00000449850 COLEC12Q5KU26 742 aa11.08□□□□□ -0.64
KDM1B-202ENST00000449850 KDM4DQ6B0I6 523 aa11.08□□□□□ -0.64
KDM1B-202ENST00000449850 FAHD1Q6P587 224 aa11.08□□□□□ -0.64
KDM1B-202ENST00000449850 C16orf47Q6ZP98 133 aaPredicted RBP11.08□□□□□ -0.64
KDM1B-202ENST00000449850 SLC29A4Q7RTT9 530 aa11.08□□□□□ -0.64
KDM1B-202ENST00000449850 THAP5Q7Z6K1 395 aa11.08□□□□□ -0.64
KDM1B-202ENST00000449850 LSRQ86X29 649 aaPredicted RBP11.08□□□□□ -0.64
KDM1B-202ENST00000449850 PRR22Q8IZ63 422 aa11.08□□□□□ -0.64
KDM1B-202ENST00000449850 ZNF614Q8N883 585 aa11.08□□□□□ -0.64
KDM1B-202ENST00000449850 FUZQ9BT04 418 aa11.08□□□□□ -0.64
KDM1B-202ENST00000449850 KRT84Q9NSB2 600 aa11.08□□□□□ -0.64
KDM1B-202ENST00000449850 CNOT1A5YKK6 2376 aaKnown RBP11.07□□□□□ -0.64
KDM1B-202ENST00000449850 AHCTF1Q8WYP5 2266 aa11.07□□□□□ -0.64
KDM1B-202ENST00000449850 A0A087WXM4 84 aa11.07□□□□□ -0.64
KDM1B-202ENST00000449850 TRBV4-1A0A0J9YWV2 114 aa11.07□□□□□ -0.64
KDM1B-202ENST00000449850 CCDC160A6NGH7 325 aa11.07□□□□□ -0.64
KDM1B-202ENST00000449850 BCKDKO14874 412 aa11.07□□□□□ -0.64
KDM1B-202ENST00000449850 TO15178 435 aa11.07□□□□□ -0.64
KDM1B-202ENST00000449850 ZNF354AO60765 605 aaPredicted RBP11.07□□□□□ -0.64
KDM1B-202ENST00000449850 THY1P04216 161 aa11.07□□□□□ -0.64
KDM1B-202ENST00000449850 ITGAMP11215 1152 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms