RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 EEF1A2Q05639 463 aaKnown RBP12.62□□□□□ -0.39
SYNGAP1-204ENST00000449372 STX4Q12846 297 aa12.62□□□□□ -0.39
SYNGAP1-204ENST00000449372 MICBQ29980 383 aa12.62□□□□□ -0.39
SYNGAP1-204ENST00000449372 PLK5Q496M5 336 aa12.62□□□□□ -0.39
SYNGAP1-204ENST00000449372 EEF1A1P5Q5VTE0 462 aa12.62□□□□□ -0.39
SYNGAP1-204ENST00000449372 DEF8Q6ZN54 512 aa12.62□□□□□ -0.39
SYNGAP1-204ENST00000449372 BMPERQ8N8U9 685 aa12.62□□□□□ -0.39
SYNGAP1-204ENST00000449372 ELP5Q8TE02 316 aa12.62□□□□□ -0.39
SYNGAP1-204ENST00000449372 ADAMTS14Q8WXS8 1223 aa12.62□□□□□ -0.39
SYNGAP1-204ENST00000449372 CACNG6Q9BXT2 260 aa12.62□□□□□ -0.39
SYNGAP1-204ENST00000449372 SLC25A13Q9UJS0 675 aa12.62□□□□□ -0.39
SYNGAP1-204ENST00000449372 NPTNQ9Y639 398 aa12.62□□□□□ -0.39
SYNGAP1-204ENST00000449372 NUP214P35658 2090 aaPredicted RBP12.62□□□□□ -0.39
SYNGAP1-204ENST00000449372 PEPDP12955 493 aa12.62□□□□□ -0.39
SYNGAP1-204ENST00000449372 SNRPEP62304 92 aaKnown RBP12.62□□□□□ -0.39
SYNGAP1-204ENST00000449372 HLXQ14774 488 aaPredicted RBP12.62□□□□□ -0.39
SYNGAP1-204ENST00000449372 HEPACAMQ14CZ8 416 aa12.62□□□□□ -0.39
SYNGAP1-204ENST00000449372 TMEM215Q68D42 235 aa12.62□□□□□ -0.39
SYNGAP1-204ENST00000449372 IKBIPQ70UQ0 350 aa12.62□□□□□ -0.39
SYNGAP1-204ENST00000449372 ADIPOR2Q86V24 386 aa12.62□□□□□ -0.39
SYNGAP1-204ENST00000449372 GJD3Q8N144 294 aa12.62□□□□□ -0.39
SYNGAP1-204ENST00000449372 IL17RCQ8NAC3 791 aa12.62□□□□□ -0.39
SYNGAP1-204ENST00000449372 GPR26Q8NDV2 337 aa12.62□□□□□ -0.39
SYNGAP1-204ENST00000449372 SPPL3Q8TCT6 385 aa12.62□□□□□ -0.39
SYNGAP1-204ENST00000449372 NR4A3Q92570 626 aa12.62□□□□□ -0.39
SYNGAP1-204ENST00000449372 RAD51AP1Q96B01 352 aa12.62□□□□□ -0.39
SYNGAP1-204ENST00000449372 NLGN3Q9NZ94 848 aa12.62□□□□□ -0.39
SYNGAP1-204ENST00000449372 PIKFYVEQ9Y2I7 2098 aa12.62□□□□□ -0.39
SYNGAP1-204ENST00000449372 KCNE1BA0A087WTH5 132 aa12.62□□□□□ -0.39
SYNGAP1-204ENST00000449372 TRBC2A0A5B9 178 aa12.62□□□□□ -0.39
SYNGAP1-204ENST00000449372 PLSCR5A0PG75 271 aa12.62□□□□□ -0.39
SYNGAP1-204ENST00000449372 CHST10O43529 356 aa12.62□□□□□ -0.39
SYNGAP1-204ENST00000449372 TFP02787 698 aa12.62□□□□□ -0.39
SYNGAP1-204ENST00000449372 TFPIP10646 304 aa12.62□□□□□ -0.39
SYNGAP1-204ENST00000449372 HOXB9P17482 250 aaPredicted RBP12.62□□□□□ -0.39
SYNGAP1-204ENST00000449372 DDX6P26196 483 aaKnown RBP eCLIP12.62□□□□□ -0.39
SYNGAP1-204ENST00000449372 PGDP52209 483 aa12.62□□□□□ -0.39
SYNGAP1-204ENST00000449372 RAB8AP61006 207 aa12.62□□□□□ -0.39
SYNGAP1-204ENST00000449372 RBMS2Q15434 407 aaKnown RBP12.62□□□□□ -0.39
SYNGAP1-204ENST00000449372 ZNF77Q15935 545 aa12.62□□□□□ -0.39
SYNGAP1-204ENST00000449372 C4orf46Q504U0 113 aa12.62□□□□□ -0.39
SYNGAP1-204ENST00000449372 ATAT1Q5SQI0 421 aa12.62□□□□□ -0.39
SYNGAP1-204ENST00000449372 RNLSQ5VYX0 342 aa12.62□□□□□ -0.39
SYNGAP1-204ENST00000449372 C22orf39Q6P5X5 142 aa12.62□□□□□ -0.39
SYNGAP1-204ENST00000449372 ZDHHC12Q96GR4 267 aa12.62□□□□□ -0.39
SYNGAP1-204ENST00000449372 YIPF4Q9BSR8 244 aa12.62□□□□□ -0.39
SYNGAP1-204ENST00000449372 IMP3Q9NV31 184 aaKnown RBP12.62□□□□□ -0.39
SYNGAP1-204ENST00000449372 C14orf105Q9NVL8 296 aa12.62□□□□□ -0.39
SYNGAP1-204ENST00000449372 GABRR3A8MPY1 467 aa12.61□□□□□ -0.39
SYNGAP1-204ENST00000449372 OR10H3O60404 316 aa12.61□□□□□ -0.39
SYNGAP1-204ENST00000449372 SLC19A2O60779 497 aa12.61□□□□□ -0.39
SYNGAP1-204ENST00000449372 EGFP01133 1207 aa12.61□□□□□ -0.39
SYNGAP1-204ENST00000449372 PRF1P14222 555 aa12.61□□□□□ -0.39
SYNGAP1-204ENST00000449372 DRD2P14416 443 aa12.61□□□□□ -0.39
SYNGAP1-204ENST00000449372 CBR1P16152 277 aa12.61□□□□□ -0.39
SYNGAP1-204ENST00000449372 GSTM3P21266 225 aa12.61□□□□□ -0.39
SYNGAP1-204ENST00000449372 CALCRP30988 508 aa12.61□□□□□ -0.39
SYNGAP1-204ENST00000449372 CTSCP53634 463 aa12.61□□□□□ -0.39
SYNGAP1-204ENST00000449372 RELQ04864 619 aaPredicted RBP12.61□□□□□ -0.39
SYNGAP1-204ENST00000449372 TMEM240Q5SV17 173 aa12.61□□□□□ -0.39
SYNGAP1-204ENST00000449372 SLC6A19Q695T7 634 aa12.61□□□□□ -0.39
SYNGAP1-204ENST00000449372 CLECL1Q8IZS7 167 aa12.61□□□□□ -0.39
SYNGAP1-204ENST00000449372 ZNF687Q8N1G0 1237 aa12.61□□□□□ -0.39
SYNGAP1-204ENST00000449372 MED8Q96G25 268 aa12.61□□□□□ -0.39
SYNGAP1-204ENST00000449372 HCFC2Q9Y5Z7 792 aa12.61□□□□□ -0.39
SYNGAP1-204ENST00000449372 IGLV3-16A0A075B6K0 115 aa12.61□□□□□ -0.39
SYNGAP1-204ENST00000449372 WASH3PC4AMC7 463 aa12.61□□□□□ -0.39
SYNGAP1-204ENST00000449372 HPXP02790 462 aa12.61□□□□□ -0.39
SYNGAP1-204ENST00000449372 XKP51811 444 aa12.61□□□□□ -0.39
SYNGAP1-204ENST00000449372 SNTB1Q13884 538 aaKnown RBP12.61□□□□□ -0.39
SYNGAP1-204ENST00000449372 TEAD2Q15562 447 aa12.61□□□□□ -0.39
SYNGAP1-204ENST00000449372 CRB2Q5IJ48 1285 aa12.61□□□□□ -0.39
SYNGAP1-204ENST00000449372 B3GNTL1Q67FW5 361 aaPredicted RBP12.61□□□□□ -0.39
SYNGAP1-204ENST00000449372 REEP3Q6NUK4 255 aa12.61□□□□□ -0.39
SYNGAP1-204ENST00000449372 LYPD4Q6UWN0 246 aa12.61□□□□□ -0.39
SYNGAP1-204ENST00000449372 CBLN2Q8IUK8 224 aa12.61□□□□□ -0.39
SYNGAP1-204ENST00000449372 ZCCHC2Q9C0B9 1178 aaKnown RBP12.61□□□□□ -0.39
SYNGAP1-204ENST00000449372 TAS2R3Q9NYW6 316 aa12.61□□□□□ -0.39
SYNGAP1-204ENST00000449372 DISC1C4P0D8 188 aa12.61□□□□□ -0.39
SYNGAP1-204ENST00000449372 CCR6P51684 374 aa12.61□□□□□ -0.39
SYNGAP1-204ENST00000449372 B4GALNT1Q00973 533 aa12.61□□□□□ -0.39
SYNGAP1-204ENST00000449372 NAE1Q13564 534 aa12.61□□□□□ -0.39
SYNGAP1-204ENST00000449372 PRAMEF13Q5VWM6 474 aa12.61□□□□□ -0.39
SYNGAP1-204ENST00000449372 BPIFCQ8NFQ6 507 aa12.61□□□□□ -0.39
SYNGAP1-204ENST00000449372 TSNAXQ99598 290 aaKnown RBP12.61□□□□□ -0.39
SYNGAP1-204ENST00000449372 ATG10Q9H0Y0 220 aa12.61□□□□□ -0.39
SYNGAP1-204ENST00000449372 C11orf16Q9NQ32 467 aa12.61□□□□□ -0.39
SYNGAP1-204ENST00000449372 KIF26AQ9ULI4 1882 aaPredicted RBP12.6□□□□□ -0.39
SYNGAP1-204ENST00000449372 MCRIP1C9JLW8 97 aa12.6□□□□□ -0.39
SYNGAP1-204ENST00000449372 RAB36O95755 333 aa12.6□□□□□ -0.39
SYNGAP1-204ENST00000449372 FGBP02675 491 aa12.6□□□□□ -0.39
SYNGAP1-204ENST00000449372 TNFRSF1BP20333 461 aa12.6□□□□□ -0.39
SYNGAP1-204ENST00000449372 PTGFRP43088 359 aa12.6□□□□□ -0.39
SYNGAP1-204ENST00000449372 HMGA2P52926 109 aa12.6□□□□□ -0.39
SYNGAP1-204ENST00000449372 SPRED2Q7Z698 418 aa12.6□□□□□ -0.39
SYNGAP1-204ENST00000449372 NFKBIDQ8NI38 313 aa12.6□□□□□ -0.39
SYNGAP1-204ENST00000449372 EXOSC8Q96B26 276 aaKnown RBP12.6□□□□□ -0.39
SYNGAP1-204ENST00000449372 WDR77Q9BQA1 342 aaPredicted RBP12.6□□□□□ -0.39
SYNGAP1-204ENST00000449372 POLR2J3Q9H1A7 115 aaKnown RBP12.6□□□□□ -0.39
SYNGAP1-204ENST00000449372 MED11Q9P086 117 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms