RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 F10P00742 488 aa13.44□□□□□ -0.26
TNF-208ENST00000449264 THBS1P07996 1170 aa13.44□□□□□ -0.26
TNF-208ENST00000449264 UMPSP11172 480 aa13.44□□□□□ -0.26
TNF-208ENST00000449264 NAGAP17050 411 aa13.44□□□□□ -0.26
TNF-208ENST00000449264 CCL11P51671 97 aa13.44□□□□□ -0.26
TNF-208ENST00000449264 KCNJ10P78508 379 aa13.44□□□□□ -0.26
TNF-208ENST00000449264 ZNF141Q15928 474 aa13.44□□□□□ -0.26
TNF-208ENST00000449264 NTRK2Q16620 822 aa13.44□□□□□ -0.26
TNF-208ENST00000449264 ZNF468Q5VIY5 522 aaPredicted RBP13.44□□□□□ -0.26
TNF-208ENST00000449264 ABHD17BQ5VST6 288 aa13.44□□□□□ -0.26
TNF-208ENST00000449264 BROXQ5VW32 411 aa13.44□□□□□ -0.26
TNF-208ENST00000449264 LRRC69Q6ZNQ3 347 aa13.44□□□□□ -0.26
TNF-208ENST00000449264 LINC00696Q6ZRV3 163 aa13.44□□□□□ -0.26
TNF-208ENST00000449264 ARMC10Q8N2F6 343 aa13.44□□□□□ -0.26
TNF-208ENST00000449264 GOLM1Q8NBJ4 401 aa13.44□□□□□ -0.26
TNF-208ENST00000449264 GEMIN6Q8WXD5 167 aaKnown RBP13.44□□□□□ -0.26
TNF-208ENST00000449264 SLCO4A1Q96BD0 722 aa13.44□□□□□ -0.26
TNF-208ENST00000449264 TMCO6Q96DC7 493 aa13.44□□□□□ -0.26
TNF-208ENST00000449264 NODALQ96S42 347 aa13.44□□□□□ -0.26
TNF-208ENST00000449264 TBL1XR1Q9BZK7 514 aa13.44□□□□□ -0.26
TNF-208ENST00000449264 HOXD1Q9GZZ0 328 aa13.44□□□□□ -0.26
TNF-208ENST00000449264 S100A14Q9HCY8 104 aa13.44□□□□□ -0.26
TNF-208ENST00000449264 HPF1Q9NWY4 346 aa13.44□□□□□ -0.26
TNF-208ENST00000449264 DTNAQ9Y4J8 743 aa13.44□□□□□ -0.26
TNF-208ENST00000449264 PTPRQQ9UMZ3 2332 aa13.43□□□□□ -0.26
TNF-208ENST00000449264 hCG_2039718K7EN88 272 aa13.43□□□□□ -0.26
TNF-208ENST00000449264 FKBP6O75344 327 aa13.43□□□□□ -0.26
TNF-208ENST00000449264 EPPINO95925 133 aa13.43□□□□□ -0.26
TNF-208ENST00000449264 RAP2AP10114 183 aa13.43□□□□□ -0.26
TNF-208ENST00000449264 TBXA2RP21731 343 aa13.43□□□□□ -0.26
TNF-208ENST00000449264 SLC7A1P30825 629 aa13.43□□□□□ -0.26
TNF-208ENST00000449264 LCN1P31025 176 aa13.43□□□□□ -0.26
TNF-208ENST00000449264 EEF1A1P68104 462 aaKnown RBP13.43□□□□□ -0.26
TNF-208ENST00000449264 TLE3Q04726 772 aa13.43□□□□□ -0.26
TNF-208ENST00000449264 RCN1Q15293 331 aa13.43□□□□□ -0.26
TNF-208ENST00000449264 EIPR1Q53HC9 387 aa13.43□□□□□ -0.26
TNF-208ENST00000449264 DHRS4L2Q6PKH6 230 aa13.43□□□□□ -0.26
TNF-208ENST00000449264 UNQ6494/PRO21346Q6UXR6 183 aa13.43□□□□□ -0.26
TNF-208ENST00000449264 APOOLQ6UXV4 268 aa13.43□□□□□ -0.26
TNF-208ENST00000449264 CARM1Q86X55 608 aa13.43□□□□□ -0.26
TNF-208ENST00000449264 C10orf67Q8IYJ2 551 aa13.43□□□□□ -0.26
TNF-208ENST00000449264 CLIP4Q8N3C7 705 aa13.43□□□□□ -0.26
TNF-208ENST00000449264 HGDQ93099 445 aa13.43□□□□□ -0.26
TNF-208ENST00000449264 CPNE5Q9HCH3 593 aa13.43□□□□□ -0.26
TNF-208ENST00000449264 CCM2LQ9NUG4 571 aaPredicted RBP13.43□□□□□ -0.26
TNF-208ENST00000449264 KLHL28Q9NXS3 571 aa13.43□□□□□ -0.26
TNF-208ENST00000449264 STMN3Q9NZ72 180 aa13.43□□□□□ -0.26
TNF-208ENST00000449264 KLRF1Q9NZS2 232 aa13.43□□□□□ -0.26
TNF-208ENST00000449264 ABI3Q9P2A4 366 aa13.43□□□□□ -0.26
TNF-208ENST00000449264 CHST2Q9Y4C5 530 aa13.43□□□□□ -0.26
TNF-208ENST00000449264 AP4S1Q9Y587 144 aa13.43□□□□□ -0.26
TNF-208ENST00000449264 SERINC4A6NH21 518 aa13.42□□□□□ -0.26
TNF-208ENST00000449264 TP53I11O14683 189 aa13.42□□□□□ -0.26
TNF-208ENST00000449264 BCAS1O75363 584 aaPredicted RBP13.42□□□□□ -0.26
TNF-208ENST00000449264 TIPRLO75663 272 aa13.42□□□□□ -0.26
TNF-208ENST00000449264 CYP7B1O75881 506 aa13.42□□□□□ -0.26
TNF-208ENST00000449264 UBTFL6P0CB48 400 aaPredicted RBP13.42□□□□□ -0.26
TNF-208ENST00000449264 OC90Q02509 493 aaPredicted RBP13.42□□□□□ -0.26
TNF-208ENST00000449264 FGFBP1Q14512 234 aa13.42□□□□□ -0.26
TNF-208ENST00000449264 CD226Q15762 336 aa13.42□□□□□ -0.26
TNF-208ENST00000449264 NDUFAF6Q330K2 333 aa13.42□□□□□ -0.26
TNF-208ENST00000449264 ZNF791Q3KP31 576 aaPredicted RBP13.42□□□□□ -0.26
TNF-208ENST00000449264 KLHL26Q53HC5 615 aa13.42□□□□□ -0.26
TNF-208ENST00000449264 RNF220Q5VTB9 566 aa13.42□□□□□ -0.26
TNF-208ENST00000449264 AGAP7PQ5VUJ5 663 aa13.42□□□□□ -0.26
TNF-208ENST00000449264 AP1ARQ63HQ0 302 aa13.42□□□□□ -0.26
TNF-208ENST00000449264 BICRALQ6AI39 1079 aa13.42□□□□□ -0.26
TNF-208ENST00000449264 ZFP1Q6P2D0 407 aa13.42□□□□□ -0.26
TNF-208ENST00000449264 NUP54Q7Z3B4 507 aa13.42□□□□□ -0.26
TNF-208ENST00000449264 MARCH3Q86UD3 253 aa13.42□□□□□ -0.26
TNF-208ENST00000449264 CYP4Z2PQ8N1L4 340 aa13.42□□□□□ -0.26
TNF-208ENST00000449264 POGLUT1Q8NBL1 392 aa13.42□□□□□ -0.26
TNF-208ENST00000449264 PHOSPHO1Q8TCT1 267 aa13.42□□□□□ -0.26
TNF-208ENST00000449264 GRHL3Q8TE85 626 aa13.42□□□□□ -0.26
TNF-208ENST00000449264 POP5Q969H6 163 aaKnown RBP13.42□□□□□ -0.26
TNF-208ENST00000449264 ARSGQ96EG1 525 aa13.42□□□□□ -0.26
TNF-208ENST00000449264 AGAP4Q96P64 663 aa13.42□□□□□ -0.26
TNF-208ENST00000449264 WFDC6Q9BQY6 131 aa13.42□□□□□ -0.26
TNF-208ENST00000449264 ARMC7Q9H6L4 198 aa13.42□□□□□ -0.26
TNF-208ENST00000449264 MAGIXQ9H6Y5 334 aa13.42□□□□□ -0.26
TNF-208ENST00000449264 METTL7AQ9H8H3 244 aa13.42□□□□□ -0.26
TNF-208ENST00000449264 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.42□□□□□ -0.26
TNF-208ENST00000449264 SLC9A8Q9Y2E8 581 aa13.42□□□□□ -0.26
TNF-208ENST00000449264 KCNMB2Q9Y691 235 aa13.42□□□□□ -0.26
TNF-208ENST00000449264 HEATR5AQ86XA9 2040 aa13.42□□□□□ -0.26
TNF-208ENST00000449264 CDHR4A6H8M9 788 aa13.41□□□□□ -0.26
TNF-208ENST00000449264 PRAMEF25A6NGN4 478 aa13.41□□□□□ -0.26
TNF-208ENST00000449264 C17orf51A8MQB3 221 aa13.41□□□□□ -0.26
TNF-208ENST00000449264 H3BNX3 289 aa13.41□□□□□ -0.26
TNF-208ENST00000449264 SYT5O00445 386 aa13.41□□□□□ -0.26
TNF-208ENST00000449264 LGI1O95970 557 aa13.41□□□□□ -0.26
TNF-208ENST00000449264 CSTAP01040 98 aa13.41□□□□□ -0.26
TNF-208ENST00000449264 SEMG1P04279 462 aa13.41□□□□□ -0.26
TNF-208ENST00000449264 CAPNS1P04632 268 aa13.41□□□□□ -0.26
TNF-208ENST00000449264 IFNW1P05000 195 aa13.41□□□□□ -0.26
TNF-208ENST00000449264 FABP3P05413 133 aa13.41□□□□□ -0.26
TNF-208ENST00000449264 ITPKBP27987 946 aa13.41□□□□□ -0.26
TNF-208ENST00000449264 CASRP41180 1078 aa13.41□□□□□ -0.26
TNF-208ENST00000449264 RGS8P57771 180 aaPredicted RBP13.41□□□□□ -0.26
TNF-208ENST00000449264 VLDLRP98155 873 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms