RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 SOX8P57073 446 aa10.08□□□□□ -0.8
LINC00342-202ENST00000448494 DAOAP59103 153 aa10.08□□□□□ -0.8
LINC00342-202ENST00000448494 OR2B8PP59922 312 aa10.08□□□□□ -0.8
LINC00342-202ENST00000448494 MRPS10P82664 201 aaKnown RBP10.08□□□□□ -0.8
LINC00342-202ENST00000448494 AKR1C1Q04828 323 aa10.08□□□□□ -0.8
LINC00342-202ENST00000448494 TWF1Q12792 350 aa10.08□□□□□ -0.8
LINC00342-202ENST00000448494 ZNF699Q32M78 642 aa10.08□□□□□ -0.8
LINC00342-202ENST00000448494 ATAT1Q5SQI0 421 aa10.08□□□□□ -0.8
LINC00342-202ENST00000448494 ACSM5Q6NUN0 579 aa10.08□□□□□ -0.8
LINC00342-202ENST00000448494 RANBP3LQ86VV4 465 aaPredicted RBP10.08□□□□□ -0.8
LINC00342-202ENST00000448494 PARGQ86W56 976 aa10.08□□□□□ -0.8
LINC00342-202ENST00000448494 NPAS3Q8IXF0 933 aa10.08□□□□□ -0.8
LINC00342-202ENST00000448494 C10orf111Q8N326 155 aa10.08□□□□□ -0.8
LINC00342-202ENST00000448494 BBS10Q8TAM1 723 aa10.08□□□□□ -0.8
LINC00342-202ENST00000448494 NEIL3Q8TAT5 605 aa10.08□□□□□ -0.8
LINC00342-202ENST00000448494 C22orf15Q8WYQ4 148 aa10.08□□□□□ -0.8
LINC00342-202ENST00000448494 TFGQ92734 400 aaPredicted RBP10.08□□□□□ -0.8
LINC00342-202ENST00000448494 ATOH8Q96SQ7 321 aa10.08□□□□□ -0.8
LINC00342-202ENST00000448494 MTERF1Q99551 399 aaKnown RBP10.08□□□□□ -0.8
LINC00342-202ENST00000448494 NIPSNAP1Q9BPW8 284 aa10.08□□□□□ -0.8
LINC00342-202ENST00000448494 MGME1Q9BQP7 344 aa10.08□□□□□ -0.8
LINC00342-202ENST00000448494 PRO1933Q9H354 126 aa10.08□□□□□ -0.8
LINC00342-202ENST00000448494 ACKR4Q9NPB9 350 aa10.08□□□□□ -0.8
LINC00342-202ENST00000448494 CTPS2Q9NRF8 586 aa10.08□□□□□ -0.8
LINC00342-202ENST00000448494 TREX1Q9NSU2 369 aa10.08□□□□□ -0.8
LINC00342-202ENST00000448494 ASF1BQ9NVP2 202 aa10.08□□□□□ -0.8
LINC00342-202ENST00000448494 ZNF69Q9UC07 566 aa10.08□□□□□ -0.8
LINC00342-202ENST00000448494 AAR2Q9Y312 384 aaKnown RBP10.08□□□□□ -0.8
LINC00342-202ENST00000448494 COL4A1P02462 1669 aa10.07□□□□□ -0.8
LINC00342-202ENST00000448494 NAP1L6A6NFF2 107 aa10.07□□□□□ -0.8
LINC00342-202ENST00000448494 DDX39AO00148 427 aaKnown RBP10.07□□□□□ -0.8
LINC00342-202ENST00000448494 SH3BGRLO75368 114 aa10.07□□□□□ -0.8
LINC00342-202ENST00000448494 RAB36O95755 333 aa10.07□□□□□ -0.8
LINC00342-202ENST00000448494 MT-ND4P03905 459 aa10.07□□□□□ -0.8
LINC00342-202ENST00000448494 EIF4EP06730 217 aaKnown RBP10.07□□□□□ -0.8
LINC00342-202ENST00000448494 CNR2P34972 360 aa10.07□□□□□ -0.8
LINC00342-202ENST00000448494 RPL3P39023 403 aaKnown RBP10.07□□□□□ -0.8
LINC00342-202ENST00000448494 GDNFP39905 211 aa10.07□□□□□ -0.8
LINC00342-202ENST00000448494 ARHGAP19Q14CB8 494 aa10.07□□□□□ -0.8
LINC00342-202ENST00000448494 FNDC3BQ53EP0 1204 aaKnown RBP10.07□□□□□ -0.8
LINC00342-202ENST00000448494 TIGD5Q53EQ6 642 aa10.07□□□□□ -0.8
LINC00342-202ENST00000448494 LPCAT3Q6P1A2 487 aa10.07□□□□□ -0.8
LINC00342-202ENST00000448494 CFAP161Q6P656 301 aa10.07□□□□□ -0.8
LINC00342-202ENST00000448494 CAMKMTQ7Z624 323 aa10.07□□□□□ -0.8
LINC00342-202ENST00000448494 MRGPRX4Q96LA9 322 aa10.07□□□□□ -0.8
LINC00342-202ENST00000448494 GPR20Q99678 358 aa10.07□□□□□ -0.8
LINC00342-202ENST00000448494 ARHGAP9Q9BRR9 750 aa10.07□□□□□ -0.8
LINC00342-202ENST00000448494 ATG101Q9BSB4 218 aa10.07□□□□□ -0.8
LINC00342-202ENST00000448494 C11orf84Q9BUA3 381 aaPredicted RBP10.07□□□□□ -0.8
LINC00342-202ENST00000448494 EPHX3Q9H6B9 360 aa10.07□□□□□ -0.8
LINC00342-202ENST00000448494 SEC61A2Q9H9S3 476 aa10.07□□□□□ -0.8
LINC00342-202ENST00000448494 SARS2Q9NP81 518 aaKnown RBP10.07□□□□□ -0.8
LINC00342-202ENST00000448494 TMEM248Q9NWD8 314 aa10.07□□□□□ -0.8
LINC00342-202ENST00000448494 TFCP2L1Q9NZI6 479 aa10.07□□□□□ -0.8
LINC00342-202ENST00000448494 RCC2Q9P258 522 aaKnown RBP10.07□□□□□ -0.8
LINC00342-202ENST00000448494 NDOR1Q9UHB4 597 aa10.07□□□□□ -0.8
LINC00342-202ENST00000448494 SLC22A14Q9Y267 594 aa10.07□□□□□ -0.8
LINC00342-202ENST00000448494 TMEM129A0AVI4 362 aa10.07□□□□□ -0.8
LINC00342-202ENST00000448494 SEC14L6B5MCN3 397 aa10.07□□□□□ -0.8
LINC00342-202ENST00000448494 FGF16O43320 207 aa10.07□□□□□ -0.8
LINC00342-202ENST00000448494 GSTZ1O43708 216 aaPredicted RBP10.07□□□□□ -0.8
LINC00342-202ENST00000448494 SLC25A12O75746 678 aa10.07□□□□□ -0.8
LINC00342-202ENST00000448494 ACTL6AO96019 429 aa10.07□□□□□ -0.8
LINC00342-202ENST00000448494 F10P00742 488 aa10.07□□□□□ -0.8
LINC00342-202ENST00000448494 HLA-DPB1P04440 258 aa10.07□□□□□ -0.8
LINC00342-202ENST00000448494 ITGA5P08648 1049 aa10.07□□□□□ -0.8
LINC00342-202ENST00000448494 MMP10P09238 476 aa10.07□□□□□ -0.8
LINC00342-202ENST00000448494 SPARCP09486 303 aa10.07□□□□□ -0.8
LINC00342-202ENST00000448494 METTL15P1P0C7V9 234 aa10.07□□□□□ -0.8
LINC00342-202ENST00000448494 BMP7P18075 431 aa10.07□□□□□ -0.8
LINC00342-202ENST00000448494 GALP22466 123 aa10.07□□□□□ -0.8
LINC00342-202ENST00000448494 NDUFS1P28331 727 aa10.07□□□□□ -0.8
LINC00342-202ENST00000448494 SHC1P29353 583 aa10.07□□□□□ -0.8
LINC00342-202ENST00000448494 AVPR2P30518 371 aa10.07□□□□□ -0.8
LINC00342-202ENST00000448494 STAT5AP42229 794 aa10.07□□□□□ -0.8
LINC00342-202ENST00000448494 MTNR1BP49286 362 aa10.07□□□□□ -0.8
LINC00342-202ENST00000448494 MECP2P51608 486 aaKnown RBP10.07□□□□□ -0.8
LINC00342-202ENST00000448494 CRISP1P54107 249 aa10.07□□□□□ -0.8
LINC00342-202ENST00000448494 SHC2P98077 582 aa10.07□□□□□ -0.8
LINC00342-202ENST00000448494 CDK6Q00534 326 aa10.07□□□□□ -0.8
LINC00342-202ENST00000448494 SLC6A3Q01959 620 aa10.07□□□□□ -0.8
LINC00342-202ENST00000448494 OR4D1Q15615 310 aa10.07□□□□□ -0.8
LINC00342-202ENST00000448494 VMACQ2NL98 169 aa10.07□□□□□ -0.8
LINC00342-202ENST00000448494 OTUD1Q5VV17 481 aaPredicted RBP10.07□□□□□ -0.8
LINC00342-202ENST00000448494 HBMQ6B0K9 141 aa10.07□□□□□ -0.8
LINC00342-202ENST00000448494 RAB12Q6IQ22 244 aa10.07□□□□□ -0.8
LINC00342-202ENST00000448494 MTFR2Q6P444 385 aa10.07□□□□□ -0.8
LINC00342-202ENST00000448494 PAQR6Q6TCH4 344 aa10.07□□□□□ -0.8
LINC00342-202ENST00000448494 IL34Q6ZMJ4 242 aa10.07□□□□□ -0.8
LINC00342-202ENST00000448494 RNF165Q6ZSG1 346 aa10.07□□□□□ -0.8
LINC00342-202ENST00000448494 ANKRD33Q7Z3H0 272 aa10.07□□□□□ -0.8
LINC00342-202ENST00000448494 LGI4Q8N135 537 aa10.07□□□□□ -0.8
LINC00342-202ENST00000448494 FBXO39Q8N4B4 442 aa10.07□□□□□ -0.8
LINC00342-202ENST00000448494 ARIH2OSQ8N7S6 290 aa10.07□□□□□ -0.8
LINC00342-202ENST00000448494 ZNF614Q8N883 585 aa10.07□□□□□ -0.8
LINC00342-202ENST00000448494 OR1J4Q8NGS1 313 aa10.07□□□□□ -0.8
LINC00342-202ENST00000448494 OR52E6Q96RD3 313 aa10.07□□□□□ -0.8
LINC00342-202ENST00000448494 UTP23Q9BRU9 249 aaKnown RBP10.07□□□□□ -0.8
LINC00342-202ENST00000448494 FUZQ9BT04 418 aa10.07□□□□□ -0.8
LINC00342-202ENST00000448494 OR52A5Q9H2C5 316 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms