RNA–Protein interactions for RNA: ENST00000447124.1

SDC1-205, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-205ENST00000447124 BTLAQ7Z6A9 289 aa18.69■□□□□ 0.58
SDC1-205ENST00000447124 MREGQ8N565 214 aa18.69■□□□□ 0.58
SDC1-205ENST00000447124 PKNOX2Q96KN3 472 aa18.69■□□□□ 0.58
SDC1-205ENST00000447124 PIGQQ9BRB3 760 aa18.69■□□□□ 0.58
SDC1-205ENST00000447124 PINK1Q9BXM7 581 aa18.69■□□□□ 0.58
SDC1-205ENST00000447124 PARD6BQ9BYG5 372 aa18.69■□□□□ 0.58
SDC1-205ENST00000447124 ACBD3Q9H3P7 528 aa18.69■□□□□ 0.58
SDC1-205ENST00000447124 ZCCHC3Q9NUD5 404 aaKnown RBP18.69■□□□□ 0.58
SDC1-205ENST00000447124 WDR91A4D1P6 747 aa18.68■□□□□ 0.58
SDC1-205ENST00000447124 NDUFB5O43674 189 aa18.68■□□□□ 0.58
SDC1-205ENST00000447124 HMGN2P05204 90 aaKnown RBP18.68■□□□□ 0.58
SDC1-205ENST00000447124 MAPK1P28482 360 aa18.68■□□□□ 0.58
SDC1-205ENST00000447124 EEF1A1P68104 462 aaKnown RBP18.68■□□□□ 0.58
SDC1-205ENST00000447124 ZNF844Q08AG5 666 aa18.68■□□□□ 0.58
SDC1-205ENST00000447124 FAM27E3Q08E93 113 aa18.68■□□□□ 0.58
SDC1-205ENST00000447124 LASP1Q14847 261 aaKnown RBP18.68■□□□□ 0.58
SDC1-205ENST00000447124 ATP6AP1LQ52LC2 224 aa18.68■□□□□ 0.58
SDC1-205ENST00000447124 CPTPQ5TA50 214 aa18.68■□□□□ 0.58
SDC1-205ENST00000447124 EEF1A1P5Q5VTE0 462 aa18.68■□□□□ 0.58
SDC1-205ENST00000447124 NUDCD3Q8IVD9 361 aa18.68■□□□□ 0.58
SDC1-205ENST00000447124 RIMKLAQ8IXN7 391 aa18.68■□□□□ 0.58
SDC1-205ENST00000447124 FNDC5Q8NAU1 212 aa18.68■□□□□ 0.58
SDC1-205ENST00000447124 PSMA8Q8TAA3 256 aa18.68■□□□□ 0.58
SDC1-205ENST00000447124 FNDC9Q8TBE3 224 aa18.68■□□□□ 0.58
SDC1-205ENST00000447124 OR5P2Q8WZ92 322 aa18.68■□□□□ 0.58
SDC1-205ENST00000447124 CXorf36Q9H7Y0 433 aa18.68■□□□□ 0.58
SDC1-205ENST00000447124 PACSIN3Q9UKS6 424 aa18.68■□□□□ 0.58
SDC1-205ENST00000447124 VDAC3Q9Y277 283 aa18.68■□□□□ 0.58
SDC1-205ENST00000447124 PLEKHA6Q9Y2H5 1048 aa18.68■□□□□ 0.58
SDC1-205ENST00000447124 AP4B1Q9Y6B7 739 aa18.68■□□□□ 0.58
SDC1-205ENST00000447124 KCNE3Q9Y6H6 103 aa18.68■□□□□ 0.58
SDC1-205ENST00000447124 MSTNO14793 375 aa18.67■□□□□ 0.58
SDC1-205ENST00000447124 CTIFO43310 598 aaKnown RBP18.67■□□□□ 0.58
SDC1-205ENST00000447124 C6orf47O95873 294 aa18.67■□□□□ 0.58
SDC1-205ENST00000447124 CRHP06850 196 aa18.67■□□□□ 0.58
SDC1-205ENST00000447124 CD1EP15812 388 aa18.67■□□□□ 0.58
SDC1-205ENST00000447124 HPCAL1P37235 193 aa18.67■□□□□ 0.58
SDC1-205ENST00000447124 CPA2P48052 419 aa18.67■□□□□ 0.58
SDC1-205ENST00000447124 SERPINB4P48594 390 aa18.67■□□□□ 0.58
SDC1-205ENST00000447124 CCT3P49368 545 aaKnown RBP18.67■□□□□ 0.58
SDC1-205ENST00000447124 PRIM2P49643 509 aa18.67■□□□□ 0.58
SDC1-205ENST00000447124 EEFSECP57772 596 aaKnown RBP18.67■□□□□ 0.58
SDC1-205ENST00000447124 ZNF474Q6S9Z5 364 aaPredicted RBP18.67■□□□□ 0.58
SDC1-205ENST00000447124 GGNQ86UU5 652 aa18.67■□□□□ 0.58
SDC1-205ENST00000447124 METTL25Q8N6Q8 603 aa18.67■□□□□ 0.58
SDC1-205ENST00000447124 SMPDL3BQ92485 455 aa18.67■□□□□ 0.58
SDC1-205ENST00000447124 CDS1Q92903 461 aa18.67■□□□□ 0.58
SDC1-205ENST00000447124 NINJ1Q92982 152 aa18.67■□□□□ 0.58
SDC1-205ENST00000447124 ZBTB9Q96C00 473 aa18.67■□□□□ 0.58
SDC1-205ENST00000447124 FOXC2Q99958 501 aa18.67■□□□□ 0.58
SDC1-205ENST00000447124 C20orf27Q9GZN8 174 aa18.67■□□□□ 0.58
SDC1-205ENST00000447124 CXXC4Q9H2H0 198 aa18.67■□□□□ 0.58
SDC1-205ENST00000447124 PIGUQ9H490 435 aa18.67■□□□□ 0.58
SDC1-205ENST00000447124 SNX8Q9Y5X2 465 aa18.67■□□□□ 0.58
SDC1-205ENST00000447124 A0A1W2PPR1 153 aa18.66■□□□□ 0.58
SDC1-205ENST00000447124 AQP8O94778 261 aa18.66■□□□□ 0.58
SDC1-205ENST00000447124 CGAP01215 116 aa18.66■□□□□ 0.58
SDC1-205ENST00000447124 OPN1LWP04000 364 aa18.66■□□□□ 0.58
SDC1-205ENST00000447124 G6PDP11413 515 aa18.66■□□□□ 0.58
SDC1-205ENST00000447124 PSMA4P25789 261 aaKnown RBP18.66■□□□□ 0.58
SDC1-205ENST00000447124 RPL3P39023 403 aaKnown RBP18.66■□□□□ 0.58
SDC1-205ENST00000447124 POU6F2P78424 691 aaPredicted RBP18.66■□□□□ 0.58
SDC1-205ENST00000447124 MPP2Q14168 576 aa18.66■□□□□ 0.58
SDC1-205ENST00000447124 PON3Q15166 354 aa18.66■□□□□ 0.58
SDC1-205ENST00000447124 CD226Q15762 336 aa18.66■□□□□ 0.58
SDC1-205ENST00000447124 KRT71Q3SY84 523 aa18.66■□□□□ 0.58
SDC1-205ENST00000447124 OR2A2Q6IF42 318 aa18.66■□□□□ 0.58
SDC1-205ENST00000447124 COX18Q8N8Q8 333 aa18.66■□□□□ 0.58
SDC1-205ENST00000447124 CNEP1R1Q8N9A8 125 aa18.66■□□□□ 0.58
SDC1-205ENST00000447124 POC1BQ8TC44 478 aa18.66■□□□□ 0.58
SDC1-205ENST00000447124 TUBGCP3Q96CW5 907 aa18.66■□□□□ 0.58
SDC1-205ENST00000447124 PGM2Q96G03 612 aa18.66■□□□□ 0.58
SDC1-205ENST00000447124 DACH2Q96NX9 599 aa18.66■□□□□ 0.58
SDC1-205ENST00000447124 STACQ99469 402 aa18.66■□□□□ 0.58
SDC1-205ENST00000447124 BTBD2Q9BX70 525 aa18.66■□□□□ 0.58
SDC1-205ENST00000447124 OPN3Q9H1Y3 402 aaPredicted RBP18.66■□□□□ 0.58
SDC1-205ENST00000447124 PLEKHF2Q9H8W4 249 aa18.66■□□□□ 0.58
SDC1-205ENST00000447124 RNF122Q9H9V4 155 aa18.66■□□□□ 0.58
SDC1-205ENST00000447124 UBQLN4Q9NRR5 601 aa18.66■□□□□ 0.58
SDC1-205ENST00000447124 DUSP22Q9NRW4 184 aa18.66■□□□□ 0.58
SDC1-205ENST00000447124 GPATCH2Q9NW75 528 aa18.66■□□□□ 0.58
SDC1-205ENST00000447124 SETD2Q9BYW2 2564 aaPredicted RBP18.65■□□□□ 0.58
SDC1-205ENST00000447124 SMNDC1O75940 238 aaKnown RBP eCLIP18.65■□□□□ 0.58
SDC1-205ENST00000447124 HRGP04196 525 aa18.65■□□□□ 0.58
SDC1-205ENST00000447124 LCN1P31025 176 aa18.65■□□□□ 0.58
SDC1-205ENST00000447124 SLC6A8P48029 635 aa18.65■□□□□ 0.58
SDC1-205ENST00000447124 SIRPAP78324 504 aa18.65■□□□□ 0.58
SDC1-205ENST00000447124 GUSBP1Q15486 140 aa18.65■□□□□ 0.58
SDC1-205ENST00000447124 CDC73Q6P1J9 531 aa18.65■□□□□ 0.58
SDC1-205ENST00000447124 JADE3Q92613 823 aa18.65■□□□□ 0.58
SDC1-205ENST00000447124 SH3YL1Q96HL8 342 aaPredicted RBP18.65■□□□□ 0.58
SDC1-205ENST00000447124 ADGRG7Q96K78 797 aa18.65■□□□□ 0.58
SDC1-205ENST00000447124 MED17Q9NVC6 651 aa18.65■□□□□ 0.58
SDC1-205ENST00000447124 GIN1Q9NXP7 522 aa18.65■□□□□ 0.58
SDC1-205ENST00000447124 ZNF175Q9Y473 711 aa18.65■□□□□ 0.58
SDC1-205ENST00000447124 C2CD3Q4AC94 2353 aa18.65■□□□□ 0.58
SDC1-205ENST00000447124 ZNF469Q96JG9 3925 aaPredicted RBP18.65■□□□□ 0.58
SDC1-205ENST00000447124 A0A087WZY1 265 aa18.64■□□□□ 0.57
SDC1-205ENST00000447124 NPIPA5A0A0B4J1W7 369 aa18.64■□□□□ 0.57
SDC1-205ENST00000447124 SH3D21A4FU49 640 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms