RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312	DNAJB6	O75190	326 aa		11.73	□□□□□ -0.53
DDR1-238	ENST00000446312	HSD3B1	P14060	373 aa		11.73	□□□□□ -0.53
DDR1-238	ENST00000446312	PTX3	P26022	381 aa	Predicted RBP	11.73	□□□□□ -0.53
DDR1-238	ENST00000446312	GIF	P27352	417 aa		11.73	□□□□□ -0.53
DDR1-238	ENST00000446312	RAB14	P61106	215 aa		11.73	□□□□□ -0.53
DDR1-238	ENST00000446312	ST8SIA6	P61647	398 aa		11.73	□□□□□ -0.53
DDR1-238	ENST00000446312	GPR176	Q14439	515 aa		11.73	□□□□□ -0.53
DDR1-238	ENST00000446312	NNAT	Q16517	81 aa		11.73	□□□□□ -0.53
DDR1-238	ENST00000446312	ZNF793	Q6ZN11	406 aa		11.73	□□□□□ -0.53
DDR1-238	ENST00000446312	ZNF433	Q8N7K0	673 aa	Predicted RBP	11.73	□□□□□ -0.53
DDR1-238	ENST00000446312	ZNF431	Q8TF32	576 aa	Predicted RBP	11.73	□□□□□ -0.53
DDR1-238	ENST00000446312	RNF32	Q9H0A6	362 aa		11.73	□□□□□ -0.53
DDR1-238	ENST00000446312	TMEM38A	Q9H6F2	299 aa		11.73	□□□□□ -0.53
DDR1-238	ENST00000446312	MYNN	Q9NPC7	610 aa		11.73	□□□□□ -0.53
DDR1-238	ENST00000446312	BAIAP2	Q9UQB8	552 aa		11.73	□□□□□ -0.53
DDR1-238	ENST00000446312		A0A0A6YYJ9	748 aa		11.73	□□□□□ -0.53
DDR1-238	ENST00000446312	LINC00587	B1AMM8	73 aa		11.73	□□□□□ -0.53
DDR1-238	ENST00000446312	NDUFS4	O43181	175 aa		11.73	□□□□□ -0.53
DDR1-238	ENST00000446312	SSNA1	O43805	119 aa		11.73	□□□□□ -0.53
DDR1-238	ENST00000446312	CTSA	P10619	480 aa		11.73	□□□□□ -0.53
DDR1-238	ENST00000446312	TFPI	P10646	304 aa		11.73	□□□□□ -0.53
DDR1-238	ENST00000446312	HSD17B2	P37059	387 aa		11.73	□□□□□ -0.53
DDR1-238	ENST00000446312	NAA10	P41227	235 aa	Predicted RBP	11.73	□□□□□ -0.53
DDR1-238	ENST00000446312	CRYZ	Q08257	329 aa	Known RBP	11.73	□□□□□ -0.53
DDR1-238	ENST00000446312	MLIP	Q5VWP3	458 aa		11.73	□□□□□ -0.53
DDR1-238	ENST00000446312	LHX8	Q68G74	356 aa		11.73	□□□□□ -0.53
DDR1-238	ENST00000446312	MZT2B	Q6NZ67	158 aa		11.73	□□□□□ -0.53
DDR1-238	ENST00000446312	PLCZ1	Q86YW0	608 aa		11.73	□□□□□ -0.53
DDR1-238	ENST00000446312	KRT78	Q8N1N4	520 aa		11.73	□□□□□ -0.53
DDR1-238	ENST00000446312	NUS1	Q96E22	293 aa		11.73	□□□□□ -0.53
DDR1-238	ENST00000446312	RBM14	Q96PK6	669 aa	Known RBP	11.73	□□□□□ -0.53
DDR1-238	ENST00000446312	LYSMD1	Q96S90	227 aa		11.73	□□□□□ -0.53
DDR1-238	ENST00000446312	RBCK1	Q9BYM8	510 aa		11.73	□□□□□ -0.53
DDR1-238	ENST00000446312	SPRTN	Q9H040	489 aa	Predicted RBP	11.73	□□□□□ -0.53
DDR1-238	ENST00000446312	ADAP2	Q9NPF8	381 aa		11.73	□□□□□ -0.53
DDR1-238	ENST00000446312	SPHK2	Q9NRA0	654 aa		11.73	□□□□□ -0.53
DDR1-238	ENST00000446312	MAPRE3	Q9UPY8	281 aa		11.73	□□□□□ -0.53
DDR1-238	ENST00000446312	MED12	Q93074	2177 aa		11.73	□□□□□ -0.53
DDR1-238	ENST00000446312	TRAV27	A0A087WT01	109 aa		11.73	□□□□□ -0.53
DDR1-238	ENST00000446312	C4orf51	C9J302	202 aa		11.73	□□□□□ -0.53
DDR1-238	ENST00000446312	CDC42EP2	O14613	210 aa		11.73	□□□□□ -0.53
DDR1-238	ENST00000446312	SLC16A5	O15375	505 aa		11.73	□□□□□ -0.53
DDR1-238	ENST00000446312	PPM1B	O75688	479 aa		11.73	□□□□□ -0.53
DDR1-238	ENST00000446312	DSG2	Q14126	1118 aa		11.73	□□□□□ -0.53
DDR1-238	ENST00000446312	METTL11B	Q5VVY1	283 aa		11.73	□□□□□ -0.53
DDR1-238	ENST00000446312	PXYLP1	Q8TE99	480 aa		11.73	□□□□□ -0.53
DDR1-238	ENST00000446312	LRRC3B	Q96PB8	259 aa		11.73	□□□□□ -0.53
DDR1-238	ENST00000446312	ATF6B	Q99941	703 aa		11.73	□□□□□ -0.53
DDR1-238	ENST00000446312	SPATA9	Q9BWV2	254 aa		11.73	□□□□□ -0.53
DDR1-238	ENST00000446312	GTPBP2	Q9BX10	602 aa	Known RBP	11.73	□□□□□ -0.53
DDR1-238	ENST00000446312	HINT3	Q9NQE9	182 aa	Known RBP	11.73	□□□□□ -0.53
DDR1-238	ENST00000446312	P2RX2	Q9UBL9	471 aa		11.73	□□□□□ -0.53
DDR1-238	ENST00000446312	RPH3A	Q9Y2J0	694 aa	Predicted RBP	11.73	□□□□□ -0.53
DDR1-238	ENST00000446312	PRRT4	C9JH25	899 aa		11.72	□□□□□ -0.53
DDR1-238	ENST00000446312	PTP4A3	O75365	173 aa		11.72	□□□□□ -0.53
DDR1-238	ENST00000446312	HMGN1	P05114	100 aa		11.72	□□□□□ -0.53
DDR1-238	ENST00000446312	PAICS	P22234	425 aa	Known RBP	11.72	□□□□□ -0.53
DDR1-238	ENST00000446312	GCGR	P47871	477 aa		11.72	□□□□□ -0.53
DDR1-238	ENST00000446312	GZMK	P49863	264 aa		11.72	□□□□□ -0.53
DDR1-238	ENST00000446312	MAP2K6	P52564	334 aa		11.72	□□□□□ -0.53
DDR1-238	ENST00000446312	SIM1	P81133	766 aa	Predicted RBP	11.72	□□□□□ -0.53
DDR1-238	ENST00000446312	ASAH1	Q13510	395 aa		11.72	□□□□□ -0.53
DDR1-238	ENST00000446312	ZNF805	Q5CZA5	627 aa		11.72	□□□□□ -0.53
DDR1-238	ENST00000446312	TMEM31	Q5JXX7	168 aa		11.72	□□□□□ -0.53
DDR1-238	ENST00000446312	LYPD4	Q6UWN0	246 aa		11.72	□□□□□ -0.53
DDR1-238	ENST00000446312	HTR3D	Q70Z44	454 aa		11.72	□□□□□ -0.53
DDR1-238	ENST00000446312	RFLNB	Q8N5W9	214 aa		11.72	□□□□□ -0.53
DDR1-238	ENST00000446312	OR11H4	Q8NGC9	324 aa		11.72	□□□□□ -0.53
DDR1-238	ENST00000446312	ARRDC3	Q96B67	414 aa		11.72	□□□□□ -0.53
DDR1-238	ENST00000446312	WDR89	Q96FK6	387 aa	Predicted RBP	11.72	□□□□□ -0.53
DDR1-238	ENST00000446312	FCRL1	Q96LA6	429 aa		11.72	□□□□□ -0.53
DDR1-238	ENST00000446312	NLGN3	Q9NZ94	848 aa		11.72	□□□□□ -0.53
DDR1-238	ENST00000446312	ZNF346	Q9UL40	294 aa	Known RBP	11.72	□□□□□ -0.53
DDR1-238	ENST00000446312	BACE2	Q9Y5Z0	518 aa		11.72	□□□□□ -0.53
DDR1-238	ENST00000446312	PLXNA3	P51805	1871 aa		11.72	□□□□□ -0.53
DDR1-238	ENST00000446312		A0A087WV48	116 aa		11.72	□□□□□ -0.53
DDR1-238	ENST00000446312	IGLON5	A6NGN9	336 aa		11.72	□□□□□ -0.53
DDR1-238	ENST00000446312	LRRN3	E7EW58	273 aa		11.72	□□□□□ -0.53
DDR1-238	ENST00000446312	IMPA2	O14732	288 aa		11.72	□□□□□ -0.53
DDR1-238	ENST00000446312	CHST10	O43529	356 aa		11.72	□□□□□ -0.53
DDR1-238	ENST00000446312	NOS3	P29474	1203 aa		11.72	□□□□□ -0.53
DDR1-238	ENST00000446312	PYCR1	P32322	319 aa		11.72	□□□□□ -0.53
DDR1-238	ENST00000446312	PSMB10	P40306	273 aa		11.72	□□□□□ -0.53
DDR1-238	ENST00000446312	LIMK1	P53667	647 aa		11.72	□□□□□ -0.53
DDR1-238	ENST00000446312	PLK5	Q496M5	336 aa		11.72	□□□□□ -0.53
DDR1-238	ENST00000446312	C12orf73	Q69YU5	71 aa		11.72	□□□□□ -0.53
DDR1-238	ENST00000446312	LAMTOR1	Q6IAA8	161 aa		11.72	□□□□□ -0.53
DDR1-238	ENST00000446312	FIGNL1	Q6PIW4	674 aa		11.72	□□□□□ -0.53
DDR1-238	ENST00000446312	PFN4	Q8NHR9	129 aa		11.72	□□□□□ -0.53
DDR1-238	ENST00000446312	MCHR1	Q99705	422 aa		11.72	□□□□□ -0.53
DDR1-238	ENST00000446312	GSDMC	Q9BYG8	508 aa		11.72	□□□□□ -0.53
DDR1-238	ENST00000446312	LRRN3	Q9H3W5	708 aa		11.72	□□□□□ -0.53
DDR1-238	ENST00000446312	CERS4	Q9HA82	394 aa		11.72	□□□□□ -0.53
DDR1-238	ENST00000446312	RBFOX1	Q9NWB1	397 aa	Known RBP	11.72	□□□□□ -0.53
DDR1-238	ENST00000446312	FBXO34	Q9NWN3	711 aa		11.72	□□□□□ -0.53
DDR1-238	ENST00000446312	HPF1	Q9NWY4	346 aa		11.72	□□□□□ -0.53
DDR1-238	ENST00000446312	CACNG2	Q9Y698	323 aa		11.72	□□□□□ -0.53
DDR1-238	ENST00000446312	A3GALT2	U3KPV4	340 aa		11.72	□□□□□ -0.53
DDR1-238	ENST00000446312	CELSR3	Q9NYQ7	3312 aa		11.72	□□□□□ -0.53
DDR1-238	ENST00000446312	OR2W5	A6NFC9	320 aa		11.71	□□□□□ -0.53

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