RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 SNRNP40Q96DI7 357 aaKnown RBP15.78■□□□□ 0.12
LIME1-202ENST00000444951 TREX2Q9BQ50 279 aaPredicted RBP15.78■□□□□ 0.12
LIME1-202ENST00000444951 SPATA9Q9BWV2 254 aa15.78■□□□□ 0.12
LIME1-202ENST00000444951 HES7Q9BYE0 225 aa15.78■□□□□ 0.12
LIME1-202ENST00000444951 ZNF350Q9GZX5 532 aa15.78■□□□□ 0.12
LIME1-202ENST00000444951 SLC38A1Q9H2H9 487 aa15.78■□□□□ 0.12
LIME1-202ENST00000444951 METTL7AQ9H8H3 244 aa15.78■□□□□ 0.12
LIME1-202ENST00000444951 ASF1BQ9NVP2 202 aa15.78■□□□□ 0.12
LIME1-202ENST00000444951 CALML5Q9NZT1 146 aa15.78■□□□□ 0.12
LIME1-202ENST00000444951 EGFL7Q9UHF1 273 aa15.78■□□□□ 0.12
LIME1-202ENST00000444951 CNTRLQ7Z7A1 2325 aa15.78■□□□□ 0.12
LIME1-202ENST00000444951 C2orf72A6NCS6 295 aa15.77■□□□□ 0.12
LIME1-202ENST00000444951 SCO2O43819 266 aa15.77■□□□□ 0.12
LIME1-202ENST00000444951 DNAJC8O75937 253 aaPredicted RBP15.77■□□□□ 0.12
LIME1-202ENST00000444951 PGM3O95394 542 aa15.77■□□□□ 0.12
LIME1-202ENST00000444951 NCK1P16333 377 aa15.77■□□□□ 0.12
LIME1-202ENST00000444951 PCGF2P35227 344 aa15.77■□□□□ 0.12
LIME1-202ENST00000444951 PGM1P36871 562 aa15.77■□□□□ 0.12
LIME1-202ENST00000444951 DCTP40126 519 aa15.77■□□□□ 0.12
LIME1-202ENST00000444951 RBBP4Q09028 425 aa15.77■□□□□ 0.12
LIME1-202ENST00000444951 SLC22A10Q63ZE4 541 aa15.77■□□□□ 0.12
LIME1-202ENST00000444951 ERICH5Q6P6B1 374 aa15.77■□□□□ 0.12
LIME1-202ENST00000444951 ZNF227Q86WZ6 799 aa15.77■□□□□ 0.12
LIME1-202ENST00000444951 HPS6Q86YV9 775 aa15.77■□□□□ 0.12
LIME1-202ENST00000444951 GPALPP1Q8IXQ4 340 aa15.77■□□□□ 0.12
LIME1-202ENST00000444951 DND1Q8IYX4 353 aaKnown RBP15.77■□□□□ 0.12
LIME1-202ENST00000444951 ZNF619Q8N2I2 560 aa15.77■□□□□ 0.12
LIME1-202ENST00000444951 CISD2Q8N5K1 135 aaKnown RBP15.77■□□□□ 0.12
LIME1-202ENST00000444951 GATSQ8NAP1 163 aa15.77■□□□□ 0.12
LIME1-202ENST00000444951 HIPK4Q8NE63 616 aa15.77■□□□□ 0.12
LIME1-202ENST00000444951 BBS10Q8TAM1 723 aa15.77■□□□□ 0.12
LIME1-202ENST00000444951 SPPL2AQ8TCT8 520 aa15.77■□□□□ 0.12
LIME1-202ENST00000444951 FIG4Q92562 907 aa15.77■□□□□ 0.12
LIME1-202ENST00000444951 HAS2Q92819 552 aa15.77■□□□□ 0.12
LIME1-202ENST00000444951 MCUR1Q96AQ8 359 aa15.77■□□□□ 0.12
LIME1-202ENST00000444951 ZG16BQ96DA0 208 aa15.77■□□□□ 0.12
LIME1-202ENST00000444951 TIMMDC1Q9NPL8 285 aa15.77■□□□□ 0.12
LIME1-202ENST00000444951 KLRF1Q9NZS2 232 aa15.77■□□□□ 0.12
LIME1-202ENST00000444951 PRPF19Q9UMS4 504 aaKnown RBP15.77■□□□□ 0.12
LIME1-202ENST00000444951 NTNG1Q9Y2I2 539 aa15.77■□□□□ 0.12
LIME1-202ENST00000444951 A0A0G2JPF8 293 aa15.76■□□□□ 0.11
LIME1-202ENST00000444951 CENPVL1A0A0U1RR11 272 aa15.76■□□□□ 0.11
LIME1-202ENST00000444951 PRAMEF25A6NGN4 478 aa15.76■□□□□ 0.11
LIME1-202ENST00000444951 HNRNPCL2B2RXH8 293 aa15.76■□□□□ 0.11
LIME1-202ENST00000444951 HNRNPCL3B7ZW38 293 aa15.76■□□□□ 0.11
LIME1-202ENST00000444951 GSC2O15499 205 aa15.76■□□□□ 0.11
LIME1-202ENST00000444951 KIAA0513O60268 411 aa15.76■□□□□ 0.11
LIME1-202ENST00000444951 DNAJA2O60884 412 aa15.76■□□□□ 0.11
LIME1-202ENST00000444951 SLC25A12O75746 678 aa15.76■□□□□ 0.11
LIME1-202ENST00000444951 NEURL1O76050 574 aa15.76■□□□□ 0.11
LIME1-202ENST00000444951 OXSR1O95747 527 aaPredicted RBP15.76■□□□□ 0.11
LIME1-202ENST00000444951 P04436 131 aa15.76■□□□□ 0.11
LIME1-202ENST00000444951 HNRNPCL4P0DMR1 293 aa15.76■□□□□ 0.11
LIME1-202ENST00000444951 GPR85P60893 370 aa15.76■□□□□ 0.11
LIME1-202ENST00000444951 RPP38P78345 283 aaKnown RBP15.76■□□□□ 0.11
LIME1-202ENST00000444951 PDZK1Q5T2W1 519 aa15.76■□□□□ 0.11
LIME1-202ENST00000444951 IGFL2Q6UWQ7 119 aa15.76■□□□□ 0.11
LIME1-202ENST00000444951 MARCH3Q86UD3 253 aa15.76■□□□□ 0.11
LIME1-202ENST00000444951 PSD4Q8NDX1 1056 aa15.76■□□□□ 0.11
LIME1-202ENST00000444951 PRR7Q8TB68 274 aa15.76■□□□□ 0.11
LIME1-202ENST00000444951 CCDC124Q96CT7 223 aaKnown RBP15.76■□□□□ 0.11
LIME1-202ENST00000444951 SGCZQ96LD1 299 aa15.76■□□□□ 0.11
LIME1-202ENST00000444951 C5orf34Q96MH7 638 aa15.76■□□□□ 0.11
LIME1-202ENST00000444951 CADM1Q9BY67 442 aaKnown RBP15.76■□□□□ 0.11
LIME1-202ENST00000444951 TBL1XR1Q9BZK7 514 aa15.76■□□□□ 0.11
LIME1-202ENST00000444951 RNF32Q9H0A6 362 aa15.76■□□□□ 0.11
LIME1-202ENST00000444951 LRMDAQ9H2I8 198 aa15.76■□□□□ 0.11
LIME1-202ENST00000444951 MTHFD2LQ9H903 347 aaPredicted RBP15.76■□□□□ 0.11
LIME1-202ENST00000444951 CACYBPQ9HB71 228 aaKnown RBP15.76■□□□□ 0.11
LIME1-202ENST00000444951 GALNT9Q9HCQ5 603 aa15.76■□□□□ 0.11
LIME1-202ENST00000444951 POLE3Q9NRF9 147 aa15.76■□□□□ 0.11
LIME1-202ENST00000444951 UBQLN4Q9NRR5 601 aa15.76■□□□□ 0.11
LIME1-202ENST00000444951 CD300AQ9UGN4 299 aa15.76■□□□□ 0.11
LIME1-202ENST00000444951 B3GNT3Q9Y2A9 372 aa15.76■□□□□ 0.11
LIME1-202ENST00000444951 CHCHD2Q9Y6H1 151 aaPredicted RBP15.76■□□□□ 0.11
LIME1-202ENST00000444951 EXPH5Q8NEV8 1989 aa15.75■□□□□ 0.11
LIME1-202ENST00000444951 CXCR6O00574 342 aa15.75■□□□□ 0.11
LIME1-202ENST00000444951 SCDO00767 359 aa15.75■□□□□ 0.11
LIME1-202ENST00000444951 OPN1SWP03999 348 aa15.75■□□□□ 0.11
LIME1-202ENST00000444951 CD46P15529 392 aa15.75■□□□□ 0.11
LIME1-202ENST00000444951 EVI2BP34910 448 aa15.75■□□□□ 0.11
LIME1-202ENST00000444951 CLK3P49761 638 aaKnown RBP15.75■□□□□ 0.11
LIME1-202ENST00000444951 TNFSF10P50591 281 aa15.75■□□□□ 0.11
LIME1-202ENST00000444951 ATP12AP54707 1039 aa15.75■□□□□ 0.11
LIME1-202ENST00000444951 MAPK14Q16539 360 aa15.75■□□□□ 0.11
LIME1-202ENST00000444951 CRYBG3Q68DQ2 2970 aa15.75■□□□□ 0.11
LIME1-202ENST00000444951 KRT73Q86Y46 540 aa15.75■□□□□ 0.11
LIME1-202ENST00000444951 SLC30A8Q8IWU4 369 aa15.75■□□□□ 0.11
LIME1-202ENST00000444951 METTL25Q8N6Q8 603 aa15.75■□□□□ 0.11
LIME1-202ENST00000444951 ZNF527Q8NB42 609 aa15.75■□□□□ 0.11
LIME1-202ENST00000444951 MDS2Q8NDY4 140 aa15.75■□□□□ 0.11
LIME1-202ENST00000444951 TNIP2Q8NFZ5 429 aa15.75■□□□□ 0.11
LIME1-202ENST00000444951 GRHL3Q8TE85 626 aa15.75■□□□□ 0.11
LIME1-202ENST00000444951 PAQR8Q8TEZ7 354 aa15.75■□□□□ 0.11
LIME1-202ENST00000444951 HOXD1Q9GZZ0 328 aa15.75■□□□□ 0.11
LIME1-202ENST00000444951 PCDHAC1Q9H158 963 aa15.75■□□□□ 0.11
LIME1-202ENST00000444951 TRIM45Q9H8W5 580 aaPredicted RBP15.75■□□□□ 0.11
LIME1-202ENST00000444951 SACM1LQ9NTJ5 587 aa15.75■□□□□ 0.11
LIME1-202ENST00000444951 KCNE5Q9UJ90 142 aa15.75■□□□□ 0.11
LIME1-202ENST00000444951 ERRFI1Q9UJM3 462 aaPredicted RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms