RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 ZNF195O14628 629 aa16.88■□□□□ 0.29
CCDC188-202ENST00000444532 TOXO94900 526 aa16.88■□□□□ 0.29
CCDC188-202ENST00000444532 IL2RAP01589 272 aa16.88■□□□□ 0.29
CCDC188-202ENST00000444532 IDO1P14902 403 aa16.88■□□□□ 0.29
CCDC188-202ENST00000444532 MATN1P21941 496 aa16.88■□□□□ 0.29
CCDC188-202ENST00000444532 NME5P56597 212 aa16.88■□□□□ 0.29
CCDC188-202ENST00000444532 B3GALT5-AS1P59052 145 aa16.88■□□□□ 0.29
CCDC188-202ENST00000444532 LRRC74AQ0VAA2 488 aa16.88■□□□□ 0.29
CCDC188-202ENST00000444532 SLC9B1Q4ZJI4 515 aa16.88■□□□□ 0.29
CCDC188-202ENST00000444532 DCST2Q5T1A1 773 aa16.88■□□□□ 0.29
CCDC188-202ENST00000444532 ANKRD46Q86W74 232 aa16.88■□□□□ 0.29
CCDC188-202ENST00000444532 MISPQ8IVT2 679 aa16.88■□□□□ 0.29
CCDC188-202ENST00000444532 GLB1L3Q8NCI6 653 aaPredicted RBP16.88■□□□□ 0.29
CCDC188-202ENST00000444532 GOT1L1Q8NHS2 421 aaPredicted RBP16.88■□□□□ 0.29
CCDC188-202ENST00000444532 TEX37Q96LM6 180 aa16.88■□□□□ 0.29
CCDC188-202ENST00000444532 CCDC115Q96NT0 180 aa16.88■□□□□ 0.29
CCDC188-202ENST00000444532 TRIB1Q96RU8 372 aa16.88■□□□□ 0.29
CCDC188-202ENST00000444532 SPOCK3Q9BQ16 436 aa16.88■□□□□ 0.29
CCDC188-202ENST00000444532 UCK2Q9BZX2 261 aa16.88■□□□□ 0.29
CCDC188-202ENST00000444532 BTNL2Q9UIR0 455 aa16.88■□□□□ 0.29
CCDC188-202ENST00000444532 RPH3AQ9Y2J0 694 aaPredicted RBP16.88■□□□□ 0.29
CCDC188-202ENST00000444532 KCNE3Q9Y6H6 103 aa16.88■□□□□ 0.29
CCDC188-202ENST00000444532 FAM90A27PA6NNH2 459 aa16.87■□□□□ 0.29
CCDC188-202ENST00000444532 CPSF4O95639 269 aaKnown RBP16.87■□□□□ 0.29
CCDC188-202ENST00000444532 STARP49675 285 aa16.87■□□□□ 0.29
CCDC188-202ENST00000444532 TFF3Q07654 80 aa16.87■□□□□ 0.29
CCDC188-202ENST00000444532 GSTA3Q16772 222 aa16.87■□□□□ 0.29
CCDC188-202ENST00000444532 SLC25A35Q3KQZ1 300 aa16.87■□□□□ 0.29
CCDC188-202ENST00000444532 PDCD4Q53EL6 469 aaKnown RBP16.87■□□□□ 0.29
CCDC188-202ENST00000444532 MAVSQ7Z434 540 aa16.87■□□□□ 0.29
CCDC188-202ENST00000444532 ZNF527Q8NB42 609 aa16.87■□□□□ 0.29
CCDC188-202ENST00000444532 ACBD4Q8NC06 268 aa16.87■□□□□ 0.29
CCDC188-202ENST00000444532 TNIP2Q8NFZ5 429 aa16.87■□□□□ 0.29
CCDC188-202ENST00000444532 MIPOL1Q8TD10 442 aa16.87■□□□□ 0.29
CCDC188-202ENST00000444532 SLC35G5Q96KT7 338 aa16.87■□□□□ 0.29
CCDC188-202ENST00000444532 UCN2Q96RP3 112 aa16.87■□□□□ 0.29
CCDC188-202ENST00000444532 PIGQQ9BRB3 760 aa16.87■□□□□ 0.29
CCDC188-202ENST00000444532 ENKD1Q9H0I2 346 aa16.87■□□□□ 0.29
CCDC188-202ENST00000444532 USH1CQ9Y6N9 552 aa16.87■□□□□ 0.29
CCDC188-202ENST00000444532 NAV2Q8IVL1 2488 aa16.87■□□□□ 0.29
CCDC188-202ENST00000444532 CACNA1DQ01668 2161 aa16.87■□□□□ 0.29
CCDC188-202ENST00000444532 ITPR2Q14571 2701 aa16.86■□□□□ 0.29
CCDC188-202ENST00000444532 A0A087WZY1 265 aa16.86■□□□□ 0.29
CCDC188-202ENST00000444532 NKX2-6A6NCS4 301 aa16.86■□□□□ 0.29
CCDC188-202ENST00000444532 MBD3L4A6NDZ8 208 aaPredicted RBP16.86■□□□□ 0.29
CCDC188-202ENST00000444532 MBD3L3A6NE82 208 aaPredicted RBP16.86■□□□□ 0.29
CCDC188-202ENST00000444532 MBD3L5A6NJ08 208 aaPredicted RBP16.86■□□□□ 0.29
CCDC188-202ENST00000444532 KDM4EB2RXH2 506 aaPredicted RBP16.86■□□□□ 0.29
CCDC188-202ENST00000444532 H0Y3Z8 333 aa16.86■□□□□ 0.29
CCDC188-202ENST00000444532 SLC22A3O75751 556 aa16.86■□□□□ 0.29
CCDC188-202ENST00000444532 TGDSO95455 350 aa16.86■□□□□ 0.29
CCDC188-202ENST00000444532 AGR2O95994 175 aa16.86■□□□□ 0.29
CCDC188-202ENST00000444532 AK1P00568 194 aa16.86■□□□□ 0.29
CCDC188-202ENST00000444532 PGRP06401 933 aa16.86■□□□□ 0.29
CCDC188-202ENST00000444532 PEPDP12955 493 aa16.86■□□□□ 0.29
CCDC188-202ENST00000444532 ZNF708P17019 499 aa16.86■□□□□ 0.29
CCDC188-202ENST00000444532 TCEA1P23193 301 aaKnown RBP16.86■□□□□ 0.29
CCDC188-202ENST00000444532 IL12AP29459 219 aa16.86■□□□□ 0.29
CCDC188-202ENST00000444532 CLDN18P56856 261 aa16.86■□□□□ 0.29
CCDC188-202ENST00000444532 PPP2R2AP63151 447 aa16.86■□□□□ 0.29
CCDC188-202ENST00000444532 SRYQ05066 204 aa16.86■□□□□ 0.29
CCDC188-202ENST00000444532 KLHL26Q53HC5 615 aa16.86■□□□□ 0.29
CCDC188-202ENST00000444532 RAET1LQ5VY80 246 aa16.86■□□□□ 0.29
CCDC188-202ENST00000444532 EPGNQ6UW88 154 aa16.86■□□□□ 0.29
CCDC188-202ENST00000444532 MTERF4Q7Z6M4 381 aaKnown RBP16.86■□□□□ 0.29
CCDC188-202ENST00000444532 ADGRE4PQ86SQ3 457 aa16.86■□□□□ 0.29
CCDC188-202ENST00000444532 LIX1LQ8IVB5 337 aa16.86■□□□□ 0.29
CCDC188-202ENST00000444532 CLEC4FQ8N1N0 589 aa16.86■□□□□ 0.29
CCDC188-202ENST00000444532 CHDHQ8NE62 594 aaPredicted RBP16.86■□□□□ 0.29
CCDC188-202ENST00000444532 OR5D16Q8NGK9 328 aa16.86■□□□□ 0.29
CCDC188-202ENST00000444532 MBD3L2Q8NHZ7 208 aaPredicted RBP16.86■□□□□ 0.29
CCDC188-202ENST00000444532 DYDC1Q8WWB3 177 aa16.86■□□□□ 0.29
CCDC188-202ENST00000444532 OR52E6Q96RD3 313 aa16.86■□□□□ 0.29
CCDC188-202ENST00000444532 SDF2Q99470 211 aa16.86■□□□□ 0.29
CCDC188-202ENST00000444532 TUBA1CQ9BQE3 449 aa16.86■□□□□ 0.29
CCDC188-202ENST00000444532 ZNF629Q9UEG4 869 aaPredicted RBP16.86■□□□□ 0.29
CCDC188-202ENST00000444532 MED12Q93074 2177 aa16.86■□□□□ 0.29
CCDC188-202ENST00000444532 UQCRHLA0A096LP55 91 aa16.85■□□□□ 0.29
CCDC188-202ENST00000444532 H3BNH8 94 aa16.85■□□□□ 0.29
CCDC188-202ENST00000444532 DVL2O14641 736 aa16.85■□□□□ 0.29
CCDC188-202ENST00000444532 UBDO15205 165 aa16.85■□□□□ 0.29
CCDC188-202ENST00000444532 DIAPH2O60879 1101 aa16.85■□□□□ 0.29
CCDC188-202ENST00000444532 IL6P05231 212 aa16.85■□□□□ 0.29
CCDC188-202ENST00000444532 DGKQP52824 942 aa16.85■□□□□ 0.29
CCDC188-202ENST00000444532 ATP12AP54707 1039 aa16.85■□□□□ 0.29
CCDC188-202ENST00000444532 RPS26P62854 115 aaKnown RBP16.85■□□□□ 0.29
CCDC188-202ENST00000444532 ARHGAP11BQ3KRB8 267 aa16.85■□□□□ 0.29
CCDC188-202ENST00000444532 FLYWCH1Q4VC44 716 aa16.85■□□□□ 0.29
CCDC188-202ENST00000444532 SAXO2Q658L1 398 aa16.85■□□□□ 0.29
CCDC188-202ENST00000444532 TRIML2Q8N7C3 387 aa16.85■□□□□ 0.29
CCDC188-202ENST00000444532 NEURL3Q96EH8 262 aa16.85■□□□□ 0.29
CCDC188-202ENST00000444532 OR52B2Q96RD2 323 aa16.85■□□□□ 0.29
CCDC188-202ENST00000444532 TM9SF2Q99805 663 aa16.85■□□□□ 0.29
CCDC188-202ENST00000444532 TREX2Q9BQ50 279 aaPredicted RBP16.85■□□□□ 0.29
CCDC188-202ENST00000444532 SERHL2Q9H4I8 314 aa16.85■□□□□ 0.29
CCDC188-202ENST00000444532 SDR39U1Q9NRG7 319 aaPredicted RBP16.85■□□□□ 0.29
CCDC188-202ENST00000444532 INTS9Q9NV88 658 aaKnown RBP16.85■□□□□ 0.29
CCDC188-202ENST00000444532 EXD2Q9NVH0 621 aa16.85■□□□□ 0.29
CCDC188-202ENST00000444532 ZIM2Q9NZV7 527 aa16.85■□□□□ 0.29
CCDC188-202ENST00000444532 ZNF337Q9Y3M9 751 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms