RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 TWIST2Q8WVJ9 160 aa18.92■□□□□ 0.62
VSX1-206ENST00000444511 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.92■□□□□ 0.62
VSX1-206ENST00000444511 JADE3Q92613 823 aa18.92■□□□□ 0.62
VSX1-206ENST00000444511 MTERF3Q96E29 417 aa18.92■□□□□ 0.62
VSX1-206ENST00000444511 GIMAP5Q96F15 307 aa18.92■□□□□ 0.62
VSX1-206ENST00000444511 APOPT1Q96IL0 206 aa18.92■□□□□ 0.62
VSX1-206ENST00000444511 PRRG4Q9BZD6 226 aa18.92■□□□□ 0.62
VSX1-206ENST00000444511 BEX4Q9NWD9 120 aaPredicted RBP18.92■□□□□ 0.62
VSX1-206ENST00000444511 MKS1Q9NXB0 559 aa18.92■□□□□ 0.62
VSX1-206ENST00000444511 PROCRQ9UNN8 238 aa18.92■□□□□ 0.62
VSX1-206ENST00000444511 TRAF6Q9Y4K3 522 aa18.92■□□□□ 0.62
VSX1-206ENST00000444511 A0A087WZY1 265 aa18.91■□□□□ 0.62
VSX1-206ENST00000444511 TMEM233B4DJY2 109 aa18.91■□□□□ 0.62
VSX1-206ENST00000444511 KCNK2O95069 426 aa18.91■□□□□ 0.62
VSX1-206ENST00000444511 CGAP01215 116 aa18.91■□□□□ 0.62
VSX1-206ENST00000444511 CHRNGP07510 517 aa18.91■□□□□ 0.62
VSX1-206ENST00000444511 NGFRP08138 427 aa18.91■□□□□ 0.62
VSX1-206ENST00000444511 FGF4P08620 206 aa18.91■□□□□ 0.62
VSX1-206ENST00000444511 ALOX5P09917 674 aa18.91■□□□□ 0.62
VSX1-206ENST00000444511 BCKDHAP12694 445 aa18.91■□□□□ 0.62
VSX1-206ENST00000444511 FOSL1P15407 271 aa18.91■□□□□ 0.62
VSX1-206ENST00000444511 ZNF17P17021 662 aa18.91■□□□□ 0.62
VSX1-206ENST00000444511 TBXA2RP21731 343 aa18.91■□□□□ 0.62
VSX1-206ENST00000444511 ALDH3A1P30838 453 aa18.91■□□□□ 0.62
VSX1-206ENST00000444511 UGT2B10P36537 528 aa18.91■□□□□ 0.62
VSX1-206ENST00000444511 HPCAL1P37235 193 aa18.91■□□□□ 0.62
VSX1-206ENST00000444511 EIF1AXP47813 144 aaKnown RBP18.91■□□□□ 0.62
VSX1-206ENST00000444511 DUSP5Q16690 384 aa18.91■□□□□ 0.62
VSX1-206ENST00000444511 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.91■□□□□ 0.62
VSX1-206ENST00000444511 FAM214BQ7L5A3 538 aa18.91■□□□□ 0.62
VSX1-206ENST00000444511 GGNQ86UU5 652 aa18.91■□□□□ 0.62
VSX1-206ENST00000444511 COX18Q8N8Q8 333 aa18.91■□□□□ 0.62
VSX1-206ENST00000444511 WFDC11Q8NEX6 87 aa18.91■□□□□ 0.62
VSX1-206ENST00000444511 EML4Q9HC35 981 aaKnown RBP18.91■□□□□ 0.62
VSX1-206ENST00000444511 DLL4Q9NR61 685 aa18.91■□□□□ 0.62
VSX1-206ENST00000444511 TMEM114B3SHH9 223 aa18.9■□□□□ 0.62
VSX1-206ENST00000444511 C16orf97H3BN30 126 aa18.9■□□□□ 0.62
VSX1-206ENST00000444511 SCDO00767 359 aa18.9■□□□□ 0.62
VSX1-206ENST00000444511 PIP5K1BO14986 540 aa18.9■□□□□ 0.62
VSX1-206ENST00000444511 NPHS1O60500 1241 aa18.9■□□□□ 0.62
VSX1-206ENST00000444511 AQP8O94778 261 aa18.9■□□□□ 0.62
VSX1-206ENST00000444511 EFNA1P20827 205 aaPredicted RBP18.9■□□□□ 0.62
VSX1-206ENST00000444511 MAPK1P28482 360 aa18.9■□□□□ 0.62
VSX1-206ENST00000444511 LCN1P31025 176 aa18.9■□□□□ 0.62
VSX1-206ENST00000444511 SERPINB4P48594 390 aa18.9■□□□□ 0.62
VSX1-206ENST00000444511 PRIM2P49643 509 aa18.9■□□□□ 0.62
VSX1-206ENST00000444511 ZNF41P51814 821 aaPredicted RBP18.9■□□□□ 0.62
VSX1-206ENST00000444511 ARL13AQ5H913 290 aaPredicted RBP18.9■□□□□ 0.62
VSX1-206ENST00000444511 ZCCHC12Q6PEW1 402 aa18.9■□□□□ 0.62
VSX1-206ENST00000444511 LRIG3Q6UXM1 1119 aa18.9■□□□□ 0.62
VSX1-206ENST00000444511 WDR75Q8IWA0 830 aaKnown RBP18.9■□□□□ 0.62
VSX1-206ENST00000444511 BANPQ8N9N5 519 aa18.9■□□□□ 0.62
VSX1-206ENST00000444511 ZNF610Q8N9Z0 462 aa18.9■□□□□ 0.62
VSX1-206ENST00000444511 OR2W6PQ8NHA6 318 aa18.9■□□□□ 0.62
VSX1-206ENST00000444511 FAM110BQ8TC76 370 aa18.9■□□□□ 0.62
VSX1-206ENST00000444511 OTUB1Q96FW1 271 aaPredicted RBP18.9■□□□□ 0.62
VSX1-206ENST00000444511 CHMP6Q96FZ7 201 aa18.9■□□□□ 0.62
VSX1-206ENST00000444511 C16orf58Q96GQ5 468 aa18.9■□□□□ 0.62
VSX1-206ENST00000444511 POM121Q96HA1 1249 aa18.9■□□□□ 0.62
VSX1-206ENST00000444511 UBQLN4Q9NRR5 601 aa18.9■□□□□ 0.62
VSX1-206ENST00000444511 ZCCHC3Q9NUD5 404 aaKnown RBP18.9■□□□□ 0.62
VSX1-206ENST00000444511 EMC9Q9Y3B6 208 aa18.9■□□□□ 0.62
VSX1-206ENST00000444511 PLGP00747 810 aaPredicted RBP18.89■□□□□ 0.61
VSX1-206ENST00000444511 CRYGSP22914 178 aa18.89■□□□□ 0.61
VSX1-206ENST00000444511 HOXC12P31275 282 aa18.89■□□□□ 0.61
VSX1-206ENST00000444511 CCKARP32238 428 aa18.89■□□□□ 0.61
VSX1-206ENST00000444511 RPL3P39023 403 aaKnown RBP18.89■□□□□ 0.61
VSX1-206ENST00000444511 ZAR1Q86SH2 424 aa18.89■□□□□ 0.61
VSX1-206ENST00000444511 MISPQ8IVT2 679 aa18.89■□□□□ 0.61
VSX1-206ENST00000444511 GTPBP8Q8N3Z3 284 aaPredicted RBP18.89■□□□□ 0.61
VSX1-206ENST00000444511 RIBC1Q8N443 379 aaPredicted RBP18.89■□□□□ 0.61
VSX1-206ENST00000444511 AGR3Q8TD06 166 aa18.89■□□□□ 0.61
VSX1-206ENST00000444511 ZBTB8AQ96BR9 441 aa18.89■□□□□ 0.61
VSX1-206ENST00000444511 FAM120BQ96EK7 910 aaKnown RBP18.89■□□□□ 0.61
VSX1-206ENST00000444511 PIK3IP1Q96FE7 263 aa18.89■□□□□ 0.61
VSX1-206ENST00000444511 SH3YL1Q96HL8 342 aaPredicted RBP18.89■□□□□ 0.61
VSX1-206ENST00000444511 PPP3R2Q96LZ3 170 aa18.89■□□□□ 0.61
VSX1-206ENST00000444511 MECRQ9BV79 373 aa18.89■□□□□ 0.61
VSX1-206ENST00000444511 GSX1Q9H4S2 264 aaPredicted RBP18.89■□□□□ 0.61
VSX1-206ENST00000444511 PAQR5Q9NXK6 330 aaPredicted RBP18.89■□□□□ 0.61
VSX1-206ENST00000444511 MAP1AP78559 2803 aaPredicted RBP18.89■□□□□ 0.61
VSX1-206ENST00000444511 ZNF469Q96JG9 3925 aaPredicted RBP18.88■□□□□ 0.61
VSX1-206ENST00000444511 A0A1W2PRB8 838 aa18.88■□□□□ 0.61
VSX1-206ENST00000444511 DEFB108AA8MXU0 73 aa18.88■□□□□ 0.61
VSX1-206ENST00000444511 SCAMP2O15127 329 aaKnown RBP18.88■□□□□ 0.61
VSX1-206ENST00000444511 SIAH2O43255 324 aa18.88■□□□□ 0.61
VSX1-206ENST00000444511 HSPA4LO95757 839 aa18.88■□□□□ 0.61
VSX1-206ENST00000444511 SLC6A8P48029 635 aa18.88■□□□□ 0.61
VSX1-206ENST00000444511 CTBP2P56545 445 aa18.88■□□□□ 0.61
VSX1-206ENST00000444511 POU6F2P78424 691 aaPredicted RBP18.88■□□□□ 0.61
VSX1-206ENST00000444511 NKX6-1P78426 367 aaPredicted RBP18.88■□□□□ 0.61
VSX1-206ENST00000444511 MLC1Q15049 377 aa18.88■□□□□ 0.61
VSX1-206ENST00000444511 GUSBP1Q15486 140 aa18.88■□□□□ 0.61
VSX1-206ENST00000444511 EXOC3L2Q2M3D2 409 aa18.88■□□□□ 0.61
VSX1-206ENST00000444511 KRTAP21-3Q3LHN1 58 aa18.88■□□□□ 0.61
VSX1-206ENST00000444511 UGT3A2Q3SY77 523 aa18.88■□□□□ 0.61
VSX1-206ENST00000444511 CCNJQ5T5M9 372 aa18.88■□□□□ 0.61
VSX1-206ENST00000444511 ZNF550Q7Z398 422 aa18.88■□□□□ 0.61
VSX1-206ENST00000444511 TRABD2AQ86V40 505 aa18.88■□□□□ 0.61
VSX1-206ENST00000444511 OR10D3Q8NH80 312 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms