RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 EPGNQ6UW88 154 aa21.44■■□□□ 1.02
VARS-217ENST00000440048 SEM1Q6ZVN7 128 aa21.44■■□□□ 1.02
VARS-217ENST00000440048 OR5D16Q8NGK9 328 aa21.44■■□□□ 1.02
VARS-217ENST00000440048 SLC35G5Q96KT7 338 aa21.44■■□□□ 1.02
VARS-217ENST00000440048 PTGES2Q9H7Z7 377 aa21.44■■□□□ 1.02
VARS-217ENST00000440048 Q9UFV3 132 aa21.44■■□□□ 1.02
VARS-217ENST00000440048 KIAA1549Q9HCM3 1950 aa21.44■■□□□ 1.02
VARS-217ENST00000440048 C19orf84I3L1E1 186 aa21.43■■□□□ 1.02
VARS-217ENST00000440048 NDUFB5O43674 189 aa21.43■■□□□ 1.02
VARS-217ENST00000440048 CPN1P15169 458 aa21.43■■□□□ 1.02
VARS-217ENST00000440048 HK1P19367 917 aa21.43■■□□□ 1.02
VARS-217ENST00000440048 ATP6V1C1P21283 382 aa21.43■■□□□ 1.02
VARS-217ENST00000440048 UQCRC2P22695 453 aa21.43■■□□□ 1.02
VARS-217ENST00000440048 CHMP24386 653 aa21.43■■□□□ 1.02
VARS-217ENST00000440048 STARP49675 285 aa21.43■■□□□ 1.02
VARS-217ENST00000440048 GANABQ14697 944 aaKnown RBP21.43■■□□□ 1.02
VARS-217ENST00000440048 PDCD4Q53EL6 469 aaKnown RBP21.43■■□□□ 1.02
VARS-217ENST00000440048 RIPPLY2Q5TAB7 128 aa21.43■■□□□ 1.02
VARS-217ENST00000440048 AAGABQ6PD74 315 aa21.43■■□□□ 1.02
VARS-217ENST00000440048 ENPP6Q6UWR7 440 aa21.43■■□□□ 1.02
VARS-217ENST00000440048 GATSQ8NAP1 163 aa21.43■■□□□ 1.02
VARS-217ENST00000440048 C1GALT1C1Q96EU7 318 aa21.43■■□□□ 1.02
VARS-217ENST00000440048 CCDC115Q96NT0 180 aa21.43■■□□□ 1.02
VARS-217ENST00000440048 ZBTB18Q99592 522 aa21.43■■□□□ 1.02
VARS-217ENST00000440048 UCK2Q9BZX2 261 aa21.43■■□□□ 1.02
VARS-217ENST00000440048 BTNL2Q9UIR0 455 aa21.43■■□□□ 1.02
VARS-217ENST00000440048 FAM90A27PA6NNH2 459 aa21.42■■□□□ 1.02
VARS-217ENST00000440048 FAM47E-STBD1D6RA91 191 aa21.42■■□□□ 1.02
VARS-217ENST00000440048 SCDO00767 359 aa21.42■■□□□ 1.02
VARS-217ENST00000440048 GMFGO60234 142 aa21.42■■□□□ 1.02
VARS-217ENST00000440048 PGRP06401 933 aa21.42■■□□□ 1.02
VARS-217ENST00000440048 HPGDP15428 266 aa21.42■■□□□ 1.02
VARS-217ENST00000440048 ZFP36L2P47974 494 aaKnown RBP21.42■■□□□ 1.02
VARS-217ENST00000440048 LHX2P50458 406 aa21.42■■□□□ 1.02
VARS-217ENST00000440048 HCFC1P51610 2035 aa21.42■■□□□ 1.02
VARS-217ENST00000440048 SF3B4Q15427 424 aaKnown RBP eCLIP21.42■■□□□ 1.02
VARS-217ENST00000440048 GSTA3Q16772 222 aa21.42■■□□□ 1.02
VARS-217ENST00000440048 GLB1L3Q8NCI6 653 aaPredicted RBP21.42■■□□□ 1.02
VARS-217ENST00000440048 OR52E6Q96RD3 313 aa21.42■■□□□ 1.02
VARS-217ENST00000440048 INTS1Q8N201 2190 aaKnown RBP21.41■■□□□ 1.02
VARS-217ENST00000440048 DOCK7Q96N67 2140 aa21.41■■□□□ 1.02
VARS-217ENST00000440048 NPIPA5A0A0B4J1W7 369 aa21.41■■□□□ 1.02
VARS-217ENST00000440048 A0A1W2PQD3 144 aa21.41■■□□□ 1.02
VARS-217ENST00000440048 DUXAA6NLW8 204 aa21.41■■□□□ 1.02
VARS-217ENST00000440048 NPIPA7E9PJI5 369 aa21.41■■□□□ 1.02
VARS-217ENST00000440048 UBDO15205 165 aa21.41■■□□□ 1.02
VARS-217ENST00000440048 SLC22A3O75751 556 aa21.41■■□□□ 1.02
VARS-217ENST00000440048 TOXO94900 526 aa21.41■■□□□ 1.02
VARS-217ENST00000440048 NPIPA8P0DM63 369 aa21.41■■□□□ 1.02
VARS-217ENST00000440048 CASP9P55211 416 aa21.41■■□□□ 1.02
VARS-217ENST00000440048 SRYQ05066 204 aa21.41■■□□□ 1.02
VARS-217ENST00000440048 NSUN5P2Q63ZY6 315 aa21.41■■□□□ 1.02
VARS-217ENST00000440048 SAXO2Q658L1 398 aa21.41■■□□□ 1.02
VARS-217ENST00000440048 LACC1Q8IV20 430 aa21.41■■□□□ 1.02
VARS-217ENST00000440048 GOT1L1Q8NHS2 421 aaPredicted RBP21.41■■□□□ 1.02
VARS-217ENST00000440048 ZPLD1Q8TCW7 415 aa21.41■■□□□ 1.02
VARS-217ENST00000440048 MIPOL1Q8TD10 442 aa21.41■■□□□ 1.02
VARS-217ENST00000440048 TRIB1Q96RU8 372 aa21.41■■□□□ 1.02
VARS-217ENST00000440048 SDF2Q99470 211 aa21.41■■□□□ 1.02
VARS-217ENST00000440048 HHATLQ9HCP6 504 aa21.41■■□□□ 1.02
VARS-217ENST00000440048 SDR39U1Q9NRG7 319 aaPredicted RBP21.41■■□□□ 1.02
VARS-217ENST00000440048 NKX2-6A6NCS4 301 aa21.4■■□□□ 1.02
VARS-217ENST00000440048 CD8B2A6NJW9 211 aa21.4■■□□□ 1.02
VARS-217ENST00000440048 TGDSO95455 350 aa21.4■■□□□ 1.02
VARS-217ENST00000440048 RAET1LQ5VY80 246 aa21.4■■□□□ 1.02
VARS-217ENST00000440048 LIX1LQ8IVB5 337 aa21.4■■□□□ 1.02
VARS-217ENST00000440048 CHDHQ8NE62 594 aaPredicted RBP21.4■■□□□ 1.02
VARS-217ENST00000440048 TNIP2Q8NFZ5 429 aa21.4■■□□□ 1.02
VARS-217ENST00000440048 CKAP2Q8WWK9 683 aa21.4■■□□□ 1.02
VARS-217ENST00000440048 MARVELD3Q96A59 401 aa21.4■■□□□ 1.02
VARS-217ENST00000440048 NEURL3Q96EH8 262 aa21.4■■□□□ 1.02
VARS-217ENST00000440048 TUBA1CQ9BQE3 449 aa21.4■■□□□ 1.02
VARS-217ENST00000440048 SLC35A5Q9BS91 424 aa21.4■■□□□ 1.02
VARS-217ENST00000440048 INPP5KQ9BT40 448 aa21.4■■□□□ 1.02
VARS-217ENST00000440048 HOXD1Q9GZZ0 328 aa21.4■■□□□ 1.02
VARS-217ENST00000440048 OR51I1Q9H343 314 aa21.4■■□□□ 1.02
VARS-217ENST00000440048 KCNJ16Q9NPI9 418 aa21.4■■□□□ 1.02
VARS-217ENST00000440048 ZIM2Q9NZV7 527 aa21.4■■□□□ 1.02
VARS-217ENST00000440048 H0Y3Z8 333 aa21.39■■□□□ 1.01
VARS-217ENST00000440048 ZNF708P17019 499 aa21.39■■□□□ 1.01
VARS-217ENST00000440048 CEACAM8P31997 349 aaPredicted RBP21.39■■□□□ 1.01
VARS-217ENST00000440048 TIMP3P35625 211 aa21.39■■□□□ 1.01
VARS-217ENST00000440048 IDH3AP50213 366 aa21.39■■□□□ 1.01
VARS-217ENST00000440048 CLDN18P56856 261 aa21.39■■□□□ 1.01
VARS-217ENST00000440048 RCAN2Q14206 197 aa21.39■■□□□ 1.01
VARS-217ENST00000440048 CD226Q15762 336 aa21.39■■□□□ 1.01
VARS-217ENST00000440048 GLYR1Q49A26 553 aaPredicted RBP21.39■■□□□ 1.01
VARS-217ENST00000440048 FLYWCH1Q4VC44 716 aa21.39■■□□□ 1.01
VARS-217ENST00000440048 ARSKQ6UWY0 536 aa21.39■■□□□ 1.01
VARS-217ENST00000440048 MISPQ8IVT2 679 aa21.39■■□□□ 1.01
VARS-217ENST00000440048 OR5M1Q8NGP8 315 aa21.39■■□□□ 1.01
VARS-217ENST00000440048 PANX1Q96RD7 426 aa21.39■■□□□ 1.01
VARS-217ENST00000440048 CALHM2Q9HA72 323 aa21.39■■□□□ 1.01
VARS-217ENST00000440048 ZNF446Q9NWS9 450 aa21.39■■□□□ 1.01
VARS-217ENST00000440048 DCHS2Q6V1P9 2916 aa21.39■■□□□ 1.01
VARS-217ENST00000440048 OR2M5A3KFT3 312 aa21.38■■□□□ 1.01
VARS-217ENST00000440048 CCDC154A6NI56 674 aa21.38■■□□□ 1.01
VARS-217ENST00000440048 HSPB2A8KAH6 182 aa21.38■■□□□ 1.01
VARS-217ENST00000440048 NPIPB9F8W1W9 429 aa21.38■■□□□ 1.01
VARS-217ENST00000440048 AK1P00568 194 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms