RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 SH3GL2Q99962 352 aa9.5□□□□□ -0.89
MCF2L-216ENST00000439475 SPOCK3Q9BQ16 436 aa9.5□□□□□ -0.89
MCF2L-216ENST00000439475 FLRT3Q9NZU0 649 aa9.5□□□□□ -0.89
MCF2L-216ENST00000439475 ZIM2Q9NZV7 527 aa9.5□□□□□ -0.89
MCF2L-216ENST00000439475 ZNF629Q9UEG4 869 aaPredicted RBP9.5□□□□□ -0.89
MCF2L-216ENST00000439475 BTNL2Q9UIR0 455 aa9.5□□□□□ -0.89
MCF2L-216ENST00000439475 GPR45Q9Y5Y3 372 aa9.5□□□□□ -0.89
MCF2L-216ENST00000439475 RELNP78509 3460 aa9.5□□□□□ -0.89
MCF2L-216ENST00000439475 IGLV3-32A0A0A0MS00 114 aa9.49□□□□□ -0.89
MCF2L-216ENST00000439475 A0A0G2JNJ9 132 aa9.49□□□□□ -0.89
MCF2L-216ENST00000439475 GTPBP1O00178 669 aaKnown RBP9.49□□□□□ -0.89
MCF2L-216ENST00000439475 ANKRD28O15084 1053 aa9.49□□□□□ -0.89
MCF2L-216ENST00000439475 POLR3GO15318 223 aaPredicted RBP9.49□□□□□ -0.89
MCF2L-216ENST00000439475 SCN2BO60939 215 aa9.49□□□□□ -0.89
MCF2L-216ENST00000439475 STX11O75558 287 aa9.49□□□□□ -0.89
MCF2L-216ENST00000439475 SLC22A3O75751 556 aa9.49□□□□□ -0.89
MCF2L-216ENST00000439475 PGRP06401 933 aa9.49□□□□□ -0.89
MCF2L-216ENST00000439475 ALDOCP09972 364 aaKnown RBP9.49□□□□□ -0.89
MCF2L-216ENST00000439475 CEACAM8P31997 349 aaPredicted RBP9.49□□□□□ -0.89
MCF2L-216ENST00000439475 PEX19P40855 299 aa9.49□□□□□ -0.89
MCF2L-216ENST00000439475 STARP49675 285 aa9.49□□□□□ -0.89
MCF2L-216ENST00000439475 ZNF41P51814 821 aaPredicted RBP9.49□□□□□ -0.89
MCF2L-216ENST00000439475 DGKQP52824 942 aa9.49□□□□□ -0.89
MCF2L-216ENST00000439475 NME5P56597 212 aa9.49□□□□□ -0.89
MCF2L-216ENST00000439475 STX1BP61266 288 aa9.49□□□□□ -0.89
MCF2L-216ENST00000439475 FLYWCH1Q4VC44 716 aa9.49□□□□□ -0.89
MCF2L-216ENST00000439475 TTMPQ5BVD1 217 aa9.49□□□□□ -0.89
MCF2L-216ENST00000439475 DCST2Q5T1A1 773 aa9.49□□□□□ -0.89
MCF2L-216ENST00000439475 CCNJQ5T5M9 372 aa9.49□□□□□ -0.89
MCF2L-216ENST00000439475 ZNF621Q6ZSS3 439 aa9.49□□□□□ -0.89
MCF2L-216ENST00000439475 C16orf62Q7Z3J2 963 aa9.49□□□□□ -0.89
MCF2L-216ENST00000439475 P4HA3Q7Z4N8 544 aa9.49□□□□□ -0.89
MCF2L-216ENST00000439475 GALNT10Q86SR1 603 aa9.49□□□□□ -0.89
MCF2L-216ENST00000439475 ANKRD46Q86W74 232 aa9.49□□□□□ -0.89
MCF2L-216ENST00000439475 B4GALNT2Q8NHY0 566 aa9.49□□□□□ -0.89
MCF2L-216ENST00000439475 PHOSPHO1Q8TCT1 267 aa9.49□□□□□ -0.89
MCF2L-216ENST00000439475 C1GALT1C1Q96EU7 318 aa9.49□□□□□ -0.89
MCF2L-216ENST00000439475 OTUB1Q96FW1 271 aaPredicted RBP9.49□□□□□ -0.89
MCF2L-216ENST00000439475 ZFP3Q96NJ6 502 aa9.49□□□□□ -0.89
MCF2L-216ENST00000439475 TM9SF2Q99805 663 aa9.49□□□□□ -0.89
MCF2L-216ENST00000439475 UCK2Q9BZX2 261 aa9.49□□□□□ -0.89
MCF2L-216ENST00000439475 RMND5AQ9H871 391 aa9.49□□□□□ -0.89
MCF2L-216ENST00000439475 Q9UFV3 132 aa9.49□□□□□ -0.89
MCF2L-216ENST00000439475 FOXD3Q9UJU5 478 aaPredicted RBP9.49□□□□□ -0.89
MCF2L-216ENST00000439475 AP4B1Q9Y6B7 739 aa9.49□□□□□ -0.89
MCF2L-216ENST00000439475 USH1CQ9Y6N9 552 aa9.49□□□□□ -0.89
MCF2L-216ENST00000439475 SPENQ96T58 3664 aaKnown RBP9.49□□□□□ -0.89
MCF2L-216ENST00000439475 NKX2-6A6NCS4 301 aa9.48□□□□□ -0.89
MCF2L-216ENST00000439475 MBD3L4A6NDZ8 208 aaPredicted RBP9.48□□□□□ -0.89
MCF2L-216ENST00000439475 MBD3L3A6NE82 208 aaPredicted RBP9.48□□□□□ -0.89
MCF2L-216ENST00000439475 CCDC154A6NI56 674 aa9.48□□□□□ -0.89
MCF2L-216ENST00000439475 MBD3L5A6NJ08 208 aaPredicted RBP9.48□□□□□ -0.89
MCF2L-216ENST00000439475 TOXO94900 526 aa9.48□□□□□ -0.89
MCF2L-216ENST00000439475 ANP32DO95626 131 aa9.48□□□□□ -0.89
MCF2L-216ENST00000439475 KRT75O95678 551 aa9.48□□□□□ -0.89
MCF2L-216ENST00000439475 SNRPB2P08579 225 aaKnown RBP9.48□□□□□ -0.89
MCF2L-216ENST00000439475 POU3F2P20265 443 aaPredicted RBP9.48□□□□□ -0.89
MCF2L-216ENST00000439475 TCEA1P23193 301 aaKnown RBP9.48□□□□□ -0.89
MCF2L-216ENST00000439475 CTSSP25774 331 aa9.48□□□□□ -0.89
MCF2L-216ENST00000439475 OPRM1P35372 400 aa9.48□□□□□ -0.89
MCF2L-216ENST00000439475 ADH7P40394 386 aa9.48□□□□□ -0.89
MCF2L-216ENST00000439475 PHC1P78364 1004 aa9.48□□□□□ -0.89
MCF2L-216ENST00000439475 IRX1P78414 480 aaPredicted RBP9.48□□□□□ -0.89
MCF2L-216ENST00000439475 CDSNQ15517 529 aa9.48□□□□□ -0.89
MCF2L-216ENST00000439475 SGCBQ16585 318 aa9.48□□□□□ -0.89
MCF2L-216ENST00000439475 ARHGAP11BQ3KRB8 267 aa9.48□□□□□ -0.89
MCF2L-216ENST00000439475 SLC9B1Q4ZJI4 515 aa9.48□□□□□ -0.89
MCF2L-216ENST00000439475 PDSS1Q5T2R2 415 aa9.48□□□□□ -0.89
MCF2L-216ENST00000439475 EPGNQ6UW88 154 aa9.48□□□□□ -0.89
MCF2L-216ENST00000439475 APOOLQ6UXV4 268 aa9.48□□□□□ -0.89
MCF2L-216ENST00000439475 MEX3BQ6ZN04 569 aaKnown RBP9.48□□□□□ -0.89
MCF2L-216ENST00000439475 GDF7Q7Z4P5 450 aa9.48□□□□□ -0.89
MCF2L-216ENST00000439475 MIER2Q8N344 545 aa9.48□□□□□ -0.89
MCF2L-216ENST00000439475 ZNF614Q8N883 585 aa9.48□□□□□ -0.89
MCF2L-216ENST00000439475 GATSQ8NAP1 163 aa9.48□□□□□ -0.89
MCF2L-216ENST00000439475 CHDHQ8NE62 594 aaPredicted RBP9.48□□□□□ -0.89
MCF2L-216ENST00000439475 OR5D16Q8NGK9 328 aa9.48□□□□□ -0.89
MCF2L-216ENST00000439475 MBD3L2Q8NHZ7 208 aaPredicted RBP9.48□□□□□ -0.89
MCF2L-216ENST00000439475 MIPOL1Q8TD10 442 aa9.48□□□□□ -0.89
MCF2L-216ENST00000439475 XAGE5Q8WWM1 108 aa9.48□□□□□ -0.89
MCF2L-216ENST00000439475 OIT3Q8WWZ8 545 aa9.48□□□□□ -0.89
MCF2L-216ENST00000439475 WNT2BQ93097 391 aa9.48□□□□□ -0.89
MCF2L-216ENST00000439475 ZBTB8AQ96BR9 441 aa9.48□□□□□ -0.89
MCF2L-216ENST00000439475 MAGEB18Q96M61 343 aa9.48□□□□□ -0.89
MCF2L-216ENST00000439475 CCDC115Q96NT0 180 aa9.48□□□□□ -0.89
MCF2L-216ENST00000439475 UCN2Q96RP3 112 aa9.48□□□□□ -0.89
MCF2L-216ENST00000439475 SDF2Q99470 211 aa9.48□□□□□ -0.89
MCF2L-216ENST00000439475 SLC35A5Q9BS91 424 aa9.48□□□□□ -0.89
MCF2L-216ENST00000439475 CCDC28BQ9BUN5 200 aa9.48□□□□□ -0.89
MCF2L-216ENST00000439475 ENKD1Q9H0I2 346 aa9.48□□□□□ -0.89
MCF2L-216ENST00000439475 OR51I1Q9H343 314 aa9.48□□□□□ -0.89
MCF2L-216ENST00000439475 FBXO34Q9NWN3 711 aa9.48□□□□□ -0.89
MCF2L-216ENST00000439475 PAQR5Q9NXK6 330 aaPredicted RBP9.48□□□□□ -0.89
MCF2L-216ENST00000439475 VDAC3Q9Y277 283 aa9.48□□□□□ -0.89
MCF2L-216ENST00000439475 DTNAQ9Y4J8 743 aa9.48□□□□□ -0.89
MCF2L-216ENST00000439475 PCNX3Q9H6A9 2034 aa9.48□□□□□ -0.89
MCF2L-216ENST00000439475 TENM4Q6N022 2769 aa9.47□□□□□ -0.89
MCF2L-216ENST00000439475 OR2M5A3KFT3 312 aa9.47□□□□□ -0.89
MCF2L-216ENST00000439475 CLCA1A8K7I4 914 aa9.47□□□□□ -0.89
MCF2L-216ENST00000439475 H3BML4 177 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms