RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 SECISBP2Q96T21 854 aaKnown RBP8.01□□□□□ -1.13
HPS4-206ENST00000439453 REG4Q9BYZ8 158 aa8.01□□□□□ -1.13
HPS4-206ENST00000439453 PLA2G12AQ9BZM1 189 aa8.01□□□□□ -1.13
HPS4-206ENST00000439453 SAP130Q9H0E3 1048 aa8.01□□□□□ -1.13
HPS4-206ENST00000439453 LMAN1LQ9HAT1 526 aa8.01□□□□□ -1.13
HPS4-206ENST00000439453 SDHAF2Q9NX18 166 aa8.01□□□□□ -1.13
HPS4-206ENST00000439453 PPIEQ9UNP9 301 aaKnown RBP8.01□□□□□ -1.13
HPS4-206ENST00000439453 ZFR2Q9UPR6 939 aaKnown RBP8.01□□□□□ -1.13
HPS4-206ENST00000439453 OR51B4Q9Y5P0 310 aa8.01□□□□□ -1.13
HPS4-206ENST00000439453 NDUFA2O43678 99 aa8.01□□□□□ -1.13
HPS4-206ENST00000439453 KLHL18O94889 574 aa8.01□□□□□ -1.13
HPS4-206ENST00000439453 GIFP27352 417 aa8.01□□□□□ -1.13
HPS4-206ENST00000439453 ACSL1P33121 698 aa8.01□□□□□ -1.13
HPS4-206ENST00000439453 NUP62P37198 522 aaPredicted RBP8.01□□□□□ -1.13
HPS4-206ENST00000439453 ZNF791Q3KP31 576 aaPredicted RBP8.01□□□□□ -1.13
HPS4-206ENST00000439453 SLC36A2Q495M3 483 aa8.01□□□□□ -1.13
HPS4-206ENST00000439453 CCSMST1Q4G0I0 132 aa8.01□□□□□ -1.13
HPS4-206ENST00000439453 HBMQ6B0K9 141 aa8.01□□□□□ -1.13
HPS4-206ENST00000439453 VASNQ6EMK4 673 aa8.01□□□□□ -1.13
HPS4-206ENST00000439453 CFAP77Q6ZQR2 320 aa8.01□□□□□ -1.13
HPS4-206ENST00000439453 OAFQ86UD1 273 aa8.01□□□□□ -1.13
HPS4-206ENST00000439453 KLHL36Q8N4N3 616 aa8.01□□□□□ -1.13
HPS4-206ENST00000439453 SAMD12Q8N8I0 201 aa8.01□□□□□ -1.13
HPS4-206ENST00000439453 BEST4Q8NFU0 473 aa8.01□□□□□ -1.13
HPS4-206ENST00000439453 OR4F15Q8NGB8 312 aa8.01□□□□□ -1.13
HPS4-206ENST00000439453 OR52H1Q8NGJ2 320 aa8.01□□□□□ -1.13
HPS4-206ENST00000439453 OR6M1Q8NGM8 313 aa8.01□□□□□ -1.13
HPS4-206ENST00000439453 OR2T4Q8NH00 348 aa8.01□□□□□ -1.13
HPS4-206ENST00000439453 ADAMTS14Q8WXS8 1223 aa8.01□□□□□ -1.13
HPS4-206ENST00000439453 RAB8BQ92930 207 aa8.01□□□□□ -1.13
HPS4-206ENST00000439453 ERMAPQ96PL5 475 aaPredicted RBP8.01□□□□□ -1.13
HPS4-206ENST00000439453 SHARPINQ9H0F6 387 aa8.01□□□□□ -1.13
HPS4-206ENST00000439453 EGLN3Q9H6Z9 239 aa8.01□□□□□ -1.13
HPS4-206ENST00000439453 SPATA2Q9UM82 520 aa8.01□□□□□ -1.13
HPS4-206ENST00000439453 A0A1W2PRQ8 180 aa8□□□□□ -1.13
HPS4-206ENST00000439453 ANKDD1BA6NHY2 528 aa8□□□□□ -1.13
HPS4-206ENST00000439453 KDM4EB2RXH2 506 aaPredicted RBP8□□□□□ -1.13
HPS4-206ENST00000439453 CHURC1-FNTBB4DL54 471 aa8□□□□□ -1.13
HPS4-206ENST00000439453 CHST10O43529 356 aa8□□□□□ -1.13
HPS4-206ENST00000439453 GALR2O43603 387 aaPredicted RBP8□□□□□ -1.13
HPS4-206ENST00000439453 ATG13O75143 517 aa8□□□□□ -1.13
HPS4-206ENST00000439453 SOCS5O75159 536 aa8□□□□□ -1.13
HPS4-206ENST00000439453 MTX2O75431 263 aa8□□□□□ -1.13
HPS4-206ENST00000439453 TGFB1P01137 390 aa8□□□□□ -1.13
HPS4-206ENST00000439453 MMP12P39900 470 aa8□□□□□ -1.13
HPS4-206ENST00000439453 CSNK1DP48730 415 aa8□□□□□ -1.13
HPS4-206ENST00000439453 AKR1D1P51857 326 aa8□□□□□ -1.13
HPS4-206ENST00000439453 ENPP2Q13822 863 aa8□□□□□ -1.13
HPS4-206ENST00000439453 ZNF273Q14593 569 aa8□□□□□ -1.13
HPS4-206ENST00000439453 GSG1Q2KHT4 349 aa8□□□□□ -1.13
HPS4-206ENST00000439453 TUSC1Q2TAM9 212 aa8□□□□□ -1.13
HPS4-206ENST00000439453 HSD17B12Q53GQ0 312 aa8□□□□□ -1.13
HPS4-206ENST00000439453 EOGTQ5NDL2 527 aa8□□□□□ -1.13
HPS4-206ENST00000439453 HACD4Q5VWC8 232 aa8□□□□□ -1.13
HPS4-206ENST00000439453 FAM180BQ6P0A1 224 aa8□□□□□ -1.13
HPS4-206ENST00000439453 TECPR1Q7Z6L1 1165 aa8□□□□□ -1.13
HPS4-206ENST00000439453 TMPRSS11BQ86T26 416 aa8□□□□□ -1.13
HPS4-206ENST00000439453 ADIPOR2Q86V24 386 aa8□□□□□ -1.13
HPS4-206ENST00000439453 MEX3DQ86XN8 651 aaKnown RBP8□□□□□ -1.13
HPS4-206ENST00000439453 MMP21Q8N119 569 aa8□□□□□ -1.13
HPS4-206ENST00000439453 FTMTQ8N4E7 242 aa8□□□□□ -1.13
HPS4-206ENST00000439453 OR8D4Q8NGM9 314 aa8□□□□□ -1.13
HPS4-206ENST00000439453 SPRYD4Q8WW59 207 aaPredicted RBP8□□□□□ -1.13
HPS4-206ENST00000439453 FOXJ1Q92949 421 aa8□□□□□ -1.13
HPS4-206ENST00000439453 ALG14Q96F25 216 aa8□□□□□ -1.13
HPS4-206ENST00000439453 ABHD1Q96SE0 405 aa8□□□□□ -1.13
HPS4-206ENST00000439453 FNDC11Q9BVV2 318 aa8□□□□□ -1.13
HPS4-206ENST00000439453 CACNG6Q9BXT2 260 aa8□□□□□ -1.13
HPS4-206ENST00000439453 SLC6A16Q9GZN6 736 aa8□□□□□ -1.13
HPS4-206ENST00000439453 OR51B5Q9H339 312 aa8□□□□□ -1.13
HPS4-206ENST00000439453 ZDHHC4Q9NPG8 344 aa8□□□□□ -1.13
HPS4-206ENST00000439453 MUC6Q6W4X9 2439 aa8□□□□□ -1.13
HPS4-206ENST00000439453 MFSD2BA6NFX1 497 aa8□□□□□ -1.13
HPS4-206ENST00000439453 CACNB4O00305 520 aaPredicted RBP8□□□□□ -1.13
HPS4-206ENST00000439453 HRO43593 1189 aa8□□□□□ -1.13
HPS4-206ENST00000439453 SSNA1O43805 119 aa8□□□□□ -1.13
HPS4-206ENST00000439453 TOXO94900 526 aa8□□□□□ -1.13
HPS4-206ENST00000439453 SOX30O94993 753 aa8□□□□□ -1.13
HPS4-206ENST00000439453 KAT7O95251 611 aa8□□□□□ -1.13
HPS4-206ENST00000439453 H2AFB2P0C5Z0 115 aa8□□□□□ -1.13
HPS4-206ENST00000439453 PEPDP12955 493 aa8□□□□□ -1.13
HPS4-206ENST00000439453 DRD1P21728 446 aa8□□□□□ -1.13
HPS4-206ENST00000439453 KELP23276 732 aa8□□□□□ -1.13
HPS4-206ENST00000439453 LCN1P31025 176 aa8□□□□□ -1.13
HPS4-206ENST00000439453 MTNR1BP49286 362 aa8□□□□□ -1.13
HPS4-206ENST00000439453 DMWDQ09019 674 aa8□□□□□ -1.13
HPS4-206ENST00000439453 ENTPD8Q5MY95 495 aa8□□□□□ -1.13
HPS4-206ENST00000439453 MPP7Q5T2T1 576 aa8□□□□□ -1.13
HPS4-206ENST00000439453 SLCO4C1Q6ZQN7 724 aa8□□□□□ -1.13
HPS4-206ENST00000439453 OR2T35Q8NGX2 323 aa8□□□□□ -1.13
HPS4-206ENST00000439453 TEX47Q8TBZ9 253 aa8□□□□□ -1.13
HPS4-206ENST00000439453 GIMAP1Q8WWP7 306 aa8□□□□□ -1.13
HPS4-206ENST00000439453 NEIL2Q969S2 332 aa8□□□□□ -1.13
HPS4-206ENST00000439453 HCN3Q9P1Z3 774 aa8□□□□□ -1.13
HPS4-206ENST00000439453 PTGFRNQ9P2B2 879 aa8□□□□□ -1.13
HPS4-206ENST00000439453 SEC14L3Q9UDX4 400 aa8□□□□□ -1.13
HPS4-206ENST00000439453 M0R3H8 397 aa8□□□□□ -1.13
HPS4-206ENST00000439453 RGS9O75916 674 aaPredicted RBP8□□□□□ -1.13
HPS4-206ENST00000439453 KLK1P06870 262 aa8□□□□□ -1.13
HPS4-206ENST00000439453 IL3P08700 152 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms