RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 HMGN1P05114 100 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 APRTP07741 180 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 IL6RP08887 468 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 OR4E1P0C645 316 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 SMIM10L1P0DMW3 83 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 HAPLN1P10915 354 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 IDO1P14902 403 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 ZNF23P17027 643 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 ZNF7P17097 686 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 ATF6P18850 670 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 SYT1P21579 422 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 HSD11B1P28845 292 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 GJB2P29033 226 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 GTF2E2P29084 291 aaKnown RBP3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 ALDH3A1P30838 453 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 AQP2P41181 271 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 SLC1A2P43004 574 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 NKX2-1P43699 371 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 CAPZBP47756 277 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 COMPP49747 757 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 METAP2P50579 478 aaKnown RBP eCLIP3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 AP3S2P59780 193 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 VSNL1P62760 191 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 LCN2P80188 198 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 REEP5Q00765 189 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 CHRNB3Q05901 458 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 PNRC1Q12796 327 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 HNF4GQ14541 408 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 CDKN3Q16667 212 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 KNOP1Q1ED39 458 aaKnown RBP3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 XKR6Q5GH73 641 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 BEND6Q5SZJ8 279 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 TREML2Q5T2D2 321 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 OTUD3Q5T2D3 398 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 LYPLAL1Q5VWZ2 237 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 ULK3Q6PHR2 472 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 DOK6Q6PKX4 331 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 VITQ6UXI7 678 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 DEF8Q6ZN54 512 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 ZNF546Q86UE3 836 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 SATL1Q86VE3 508 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 TMC8Q8IU68 726 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 MMAAQ8IVH4 418 aaKnown RBP3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 MFSD6LQ8IWD5 586 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 ZC3H3Q8IXZ2 948 aaKnown RBP3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 BOD1L2Q8IYS8 172 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 ZBED8Q8IZ13 594 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 CDK20Q8IZL9 346 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 IQCKQ8N0W5 287 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 ARHGAP18Q8N392 663 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 RYBPQ8N488 228 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 SPATA6LQ8N4H0 392 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 PAQR4Q8N4S7 273 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 THAP8Q8NA92 274 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 MFSD9Q8NBP5 474 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 POC1AQ8NBT0 407 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 OR52N4Q8NGI2 321 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 OR2L8Q8NGY9 312 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 OR4L1Q8NH43 312 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 NANPQ8TBE9 248 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 DTD1Q8TEA8 209 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 ZNF473Q8WTR7 871 aaKnown RBP3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 PIH1D2Q8WWB5 315 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 XAGE5Q8WWM1 108 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 SMPDL3BQ92485 455 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 PIGTQ969N2 578 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 FAM131CQ96AQ9 280 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 LGALS12Q96DT0 336 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 SMIM10Q96HG1 83 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 SLC38A2Q96QD8 506 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 IL4I1Q96RQ9 567 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 RANBP9Q96S59 729 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 GPR174Q9BXC1 333 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 MAP1LC3CQ9BXW4 147 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 SRRQ9GZT4 340 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 PPP1R3EQ9H7J1 279 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 WDR54Q9H977 334 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 UGT1A10Q9HAW8 530 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 SAMSN1Q9NSI8 373 aaKnown RBP3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 DAPK2Q9UIK4 370 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 C3orf18Q9UK00 162 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 IKZF3Q9UKT9 509 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 RAB23Q9ULC3 237 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 POLDIP2Q9Y2S7 368 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 YIPF1Q9Y548 306 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 TSSC4Q9Y5U2 329 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 ATP10AO60312 1499 aa3.27□□□□□ -1.89
HMGB1P12-201ENST00000438594 NACADO15069 1562 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 IGKV2D-30A0A075B6S6 120 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 TRAV18A0A075B6X5 111 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 KCNE1BA0A087WTH5 132 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 KBTBD11-OT1A0A1B0GTJ5 212 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 A0A1W2PPV9 198 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 H3BN98 237 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 CLOCKO15516 846 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 SYT7O43581 403 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 PFKFB2O60825 505 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 ENTPD5O75356 428 aa3.26□□□□□ -1.89
HMGB1P12-201ENST00000438594 RGS11O94810 467 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms