RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 MRPL18Q9H0U6 180 aaKnown RBP7□□□□□ -1.29
VPS50-204ENST00000438395 OPN3Q9H1Y3 402 aaPredicted RBP7□□□□□ -1.29
VPS50-204ENST00000438395 MID1IP1Q9NPA3 183 aa7□□□□□ -1.29
VPS50-204ENST00000438395 MYNNQ9NPC7 610 aa7□□□□□ -1.29
VPS50-204ENST00000438395 ELOVL5Q9NYP7 299 aa7□□□□□ -1.29
VPS50-204ENST00000438395 MED11Q9P086 117 aa7□□□□□ -1.29
VPS50-204ENST00000438395 TMEM216Q9P0N5 145 aa7□□□□□ -1.29
VPS50-204ENST00000438395 PSMC3IPQ9P2W1 217 aaPredicted RBP7□□□□□ -1.29
VPS50-204ENST00000438395 MCTS1Q9ULC4 181 aaKnown RBP7□□□□□ -1.29
VPS50-204ENST00000438395 WBP11Q9Y2W2 641 aaKnown RBP7□□□□□ -1.29
VPS50-204ENST00000438395 TIMM22Q9Y584 194 aa7□□□□□ -1.29
VPS50-204ENST00000438395 CSPG4Q6UVK1 2322 aa6.99□□□□□ -1.29
VPS50-204ENST00000438395 EML6Q6ZMW3 1958 aa6.99□□□□□ -1.29
VPS50-204ENST00000438395 OR2M5A3KFT3 312 aa6.99□□□□□ -1.29
VPS50-204ENST00000438395 MYO1GB0I1T2 1018 aa6.99□□□□□ -1.29
VPS50-204ENST00000438395 EIF1AYO14602 144 aaKnown RBP6.99□□□□□ -1.29
VPS50-204ENST00000438395 PDPK1O15530 556 aa6.99□□□□□ -1.29
VPS50-204ENST00000438395 ZIC3O60481 467 aa6.99□□□□□ -1.29
VPS50-204ENST00000438395 GLRA3O75311 464 aa6.99□□□□□ -1.29
VPS50-204ENST00000438395 UTS2O95399 124 aa6.99□□□□□ -1.29
VPS50-204ENST00000438395 IL33O95760 270 aa6.99□□□□□ -1.29
VPS50-204ENST00000438395 CHEK2O96017 543 aa6.99□□□□□ -1.29
VPS50-204ENST00000438395 SBK3P0C264 359 aa6.99□□□□□ -1.29
VPS50-204ENST00000438395 PPP3CBP16298 524 aa6.99□□□□□ -1.29
VPS50-204ENST00000438395 GABRA3P34903 492 aa6.99□□□□□ -1.29
VPS50-204ENST00000438395 PCYT1AP49585 367 aa6.99□□□□□ -1.29
VPS50-204ENST00000438395 ZNF41P51814 821 aaPredicted RBP6.99□□□□□ -1.29
VPS50-204ENST00000438395 CLDN15P56746 228 aa6.99□□□□□ -1.29
VPS50-204ENST00000438395 RAE1P78406 368 aaKnown RBP6.99□□□□□ -1.29
VPS50-204ENST00000438395 C17orf67Q0P5P2 114 aa6.99□□□□□ -1.29
VPS50-204ENST00000438395 HSPB3Q12988 150 aa6.99□□□□□ -1.29
VPS50-204ENST00000438395 GLYR1Q49A26 553 aaPredicted RBP6.99□□□□□ -1.29
VPS50-204ENST00000438395 PDSS1Q5T2R2 415 aa6.99□□□□□ -1.29
VPS50-204ENST00000438395 TIFABQ6ZNK6 161 aa6.99□□□□□ -1.29
VPS50-204ENST00000438395 MARCH3Q86UD3 253 aa6.99□□□□□ -1.29
VPS50-204ENST00000438395 LRRC75A-AS1Q8N1F1 130 aa6.99□□□□□ -1.29
VPS50-204ENST00000438395 OR2L13Q8N349 312 aa6.99□□□□□ -1.29
VPS50-204ENST00000438395 FADS6Q8N9I5 356 aa6.99□□□□□ -1.29
VPS50-204ENST00000438395 OR4N2Q8NGD1 307 aa6.99□□□□□ -1.29
VPS50-204ENST00000438395 OR5M1Q8NGP8 315 aa6.99□□□□□ -1.29
VPS50-204ENST00000438395 FAM76AQ8TAV0 307 aa6.99□□□□□ -1.29
VPS50-204ENST00000438395 DUSP19Q8WTR2 217 aa6.99□□□□□ -1.29
VPS50-204ENST00000438395 JADE3Q92613 823 aa6.99□□□□□ -1.29
VPS50-204ENST00000438395 STARD4Q96DR4 205 aa6.99□□□□□ -1.29
VPS50-204ENST00000438395 C1GALT1C1Q96EU7 318 aa6.99□□□□□ -1.29
VPS50-204ENST00000438395 PERPQ96FX8 193 aa6.99□□□□□ -1.29
VPS50-204ENST00000438395 CHMP6Q96FZ7 201 aa6.99□□□□□ -1.29
VPS50-204ENST00000438395 REXO5Q96IC2 774 aaKnown RBP6.99□□□□□ -1.29
VPS50-204ENST00000438395 WFIKKN1Q96NZ8 548 aa6.99□□□□□ -1.29
VPS50-204ENST00000438395 KCNA7Q96RP8 456 aa6.99□□□□□ -1.29
VPS50-204ENST00000438395 PIP5K1AQ99755 562 aa6.99□□□□□ -1.29
VPS50-204ENST00000438395 BDH2Q9BUT1 245 aa6.99□□□□□ -1.29
VPS50-204ENST00000438395 PAQR5Q9NXK6 330 aaPredicted RBP6.99□□□□□ -1.29
VPS50-204ENST00000438395 TBK1Q9UHD2 729 aa6.99□□□□□ -1.29
VPS50-204ENST00000438395 DCDC2Q9UHG0 476 aa6.99□□□□□ -1.29
VPS50-204ENST00000438395 ZNF225Q9UK10 706 aa6.99□□□□□ -1.29
VPS50-204ENST00000438395 C19orf53Q9UNZ5 99 aaPredicted RBP6.99□□□□□ -1.29
VPS50-204ENST00000438395 POLR3HQ9Y535 204 aaPredicted RBP6.99□□□□□ -1.29
VPS50-204ENST00000438395 AP4B1Q9Y6B7 739 aa6.99□□□□□ -1.29
VPS50-204ENST00000438395 ATRQ13535 2644 aa6.99□□□□□ -1.29
VPS50-204ENST00000438395 ARID1AO14497 2285 aa6.99□□□□□ -1.29
VPS50-204ENST00000438395 STAB1Q9NY15 2570 aa6.99□□□□□ -1.29
VPS50-204ENST00000438395 MPDZO75970 2070 aa6.99□□□□□ -1.29
VPS50-204ENST00000438395 ROS1P08922 2347 aa6.98□□□□□ -1.29
VPS50-204ENST00000438395 A0A087WZY1 265 aa6.98□□□□□ -1.29
VPS50-204ENST00000438395 C17orf51A8MQB3 221 aa6.98□□□□□ -1.29
VPS50-204ENST00000438395 H7C1Q1 480 aa6.98□□□□□ -1.29
VPS50-204ENST00000438395 SMAD7O15105 426 aaKnown RBP6.98□□□□□ -1.29
VPS50-204ENST00000438395 RGS14O43566 566 aa6.98□□□□□ -1.29
VPS50-204ENST00000438395 NDUFB5O43674 189 aa6.98□□□□□ -1.29
VPS50-204ENST00000438395 FADS1O60427 444 aa6.98□□□□□ -1.29
VPS50-204ENST00000438395 SEC22BO75396 215 aa6.98□□□□□ -1.29
VPS50-204ENST00000438395 RSL1D1O76021 490 aaKnown RBP6.98□□□□□ -1.29
VPS50-204ENST00000438395 ANGPTL1O95841 491 aa6.98□□□□□ -1.29
VPS50-204ENST00000438395 HEXAP06865 529 aa6.98□□□□□ -1.29
VPS50-204ENST00000438395 CD8BP10966 210 aa6.98□□□□□ -1.29
VPS50-204ENST00000438395 PRPS2P11908 318 aa6.98□□□□□ -1.29
VPS50-204ENST00000438395 NEFHP12036 1026 aa6.98□□□□□ -1.29
VPS50-204ENST00000438395 ZNF17P17021 662 aa6.98□□□□□ -1.29
VPS50-204ENST00000438395 TBXA2RP21731 343 aa6.98□□□□□ -1.29
VPS50-204ENST00000438395 CRYGSP22914 178 aa6.98□□□□□ -1.29
VPS50-204ENST00000438395 KIR2DL2P43627 348 aaPredicted RBP6.98□□□□□ -1.29
VPS50-204ENST00000438395 CCT5P48643 541 aa6.98□□□□□ -1.29
VPS50-204ENST00000438395 PRKAG1P54619 331 aa6.98□□□□□ -1.29
VPS50-204ENST00000438395 GAS1P54826 345 aa6.98□□□□□ -1.29
VPS50-204ENST00000438395 NR1H2P55055 460 aa6.98□□□□□ -1.29
VPS50-204ENST00000438395 CLDN20P56880 219 aa6.98□□□□□ -1.29
VPS50-204ENST00000438395 B3GALT5-AS1P59052 145 aa6.98□□□□□ -1.29
VPS50-204ENST00000438395 PPP2R2BQ00005 443 aa6.98□□□□□ -1.29
VPS50-204ENST00000438395 PSG6Q00889 435 aa6.98□□□□□ -1.29
VPS50-204ENST00000438395 ACKR1Q16570 336 aa6.98□□□□□ -1.29
VPS50-204ENST00000438395 BEX5Q5H9J7 111 aa6.98□□□□□ -1.29
VPS50-204ENST00000438395 FAM71E1Q6IPT2 247 aa6.98□□□□□ -1.29
VPS50-204ENST00000438395 ZYG11AQ6WRX3 759 aa6.98□□□□□ -1.29
VPS50-204ENST00000438395 FAM214BQ7L5A3 538 aa6.98□□□□□ -1.29
VPS50-204ENST00000438395 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.98□□□□□ -1.29
VPS50-204ENST00000438395 ZNF550Q7Z398 422 aa6.98□□□□□ -1.29
VPS50-204ENST00000438395 YTHDF3Q7Z739 585 aaKnown RBP6.98□□□□□ -1.29
VPS50-204ENST00000438395 CXorf67Q86X51 503 aaPredicted RBP6.98□□□□□ -1.29
VPS50-204ENST00000438395 WDR75Q8IWA0 830 aaKnown RBP6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms