RNA–Protein interactions for RNA: ENST00000436786.1

LINC01239-202, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 2 BASIC

Gene LINC01239, Length 2,347 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-202ENST00000436786 GABRA3P34903 492 aa3.96□□□□□ -1.78
LINC01239-202ENST00000436786 EIF1AXP47813 144 aaKnown RBP3.96□□□□□ -1.78
LINC01239-202ENST00000436786 CLK3P49761 638 aaKnown RBP3.96□□□□□ -1.78
LINC01239-202ENST00000436786 PRKAA2P54646 552 aa3.96□□□□□ -1.78
LINC01239-202ENST00000436786 CAPRIN1Q14444 709 aaKnown RBP3.96□□□□□ -1.78
LINC01239-202ENST00000436786 GANABQ14697 944 aaKnown RBP3.96□□□□□ -1.78
LINC01239-202ENST00000436786 SGCBQ16585 318 aa3.96□□□□□ -1.78
LINC01239-202ENST00000436786 DECR1Q16698 335 aa3.96□□□□□ -1.78
LINC01239-202ENST00000436786 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.96□□□□□ -1.78
LINC01239-202ENST00000436786 GRAMD1BQ3KR37 738 aa3.96□□□□□ -1.78
LINC01239-202ENST00000436786 SPDYAQ5MJ70 313 aa3.96□□□□□ -1.78
LINC01239-202ENST00000436786 FAM71E1Q6IPT2 247 aa3.96□□□□□ -1.78
LINC01239-202ENST00000436786 PPP4R4Q6NUP7 873 aa3.96□□□□□ -1.78
LINC01239-202ENST00000436786 GALNT18Q6P9A2 607 aa3.96□□□□□ -1.78
LINC01239-202ENST00000436786 ZNF704Q6ZNC4 412 aaPredicted RBP3.96□□□□□ -1.78
LINC01239-202ENST00000436786 SH2D5Q6ZV89 423 aa3.96□□□□□ -1.78
LINC01239-202ENST00000436786 FAM214BQ7L5A3 538 aa3.96□□□□□ -1.78
LINC01239-202ENST00000436786 OR2L13Q8N349 312 aa3.96□□□□□ -1.78
LINC01239-202ENST00000436786 METTL25Q8N6Q8 603 aa3.96□□□□□ -1.78
LINC01239-202ENST00000436786 LRRN4CLQ8ND94 238 aa3.96□□□□□ -1.78
LINC01239-202ENST00000436786 IFT81Q8WYA0 676 aa3.96□□□□□ -1.78
LINC01239-202ENST00000436786 ELP4Q96EB1 424 aa3.96□□□□□ -1.78
LINC01239-202ENST00000436786 AMDHD1Q96NU7 426 aa3.96□□□□□ -1.78
LINC01239-202ENST00000436786 NPAS1Q99742 590 aa3.96□□□□□ -1.78
LINC01239-202ENST00000436786 SSBP4Q9BWG4 385 aaPredicted RBP3.96□□□□□ -1.78
LINC01239-202ENST00000436786 STMN4Q9H169 189 aaPredicted RBP3.96□□□□□ -1.78
LINC01239-202ENST00000436786 GLIPR2Q9H4G4 154 aa3.96□□□□□ -1.78
LINC01239-202ENST00000436786 SIRT5Q9NXA8 310 aa3.96□□□□□ -1.78
LINC01239-202ENST00000436786 ADAM21Q9UKJ8 722 aa3.96□□□□□ -1.78
LINC01239-202ENST00000436786 CLEC4AQ9UMR7 237 aa3.96□□□□□ -1.78
LINC01239-202ENST00000436786 ABCG2Q9UNQ0 655 aa3.96□□□□□ -1.78
LINC01239-202ENST00000436786 NSD1Q96L73 2696 aaPredicted RBP3.96□□□□□ -1.78
LINC01239-202ENST00000436786 NAV3Q8IVL0 2385 aa3.96□□□□□ -1.78
LINC01239-202ENST00000436786 DNHD1Q96M86 4753 aa3.96□□□□□ -1.78
LINC01239-202ENST00000436786 A0A087WUV0 522 aaPredicted RBP3.95□□□□□ -1.78
LINC01239-202ENST00000436786 IGLV3-32A0A0A0MS00 114 aa3.95□□□□□ -1.78
LINC01239-202ENST00000436786 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.95□□□□□ -1.78
LINC01239-202ENST00000436786 SERTM1A2A2V5 107 aa3.95□□□□□ -1.78
LINC01239-202ENST00000436786 UBFD1O14562 309 aaKnown RBP3.95□□□□□ -1.78
LINC01239-202ENST00000436786 EIF1AYO14602 144 aaKnown RBP3.95□□□□□ -1.78
LINC01239-202ENST00000436786 ANGPTL1O95841 491 aa3.95□□□□□ -1.78
LINC01239-202ENST00000436786 PLGP00747 810 aaPredicted RBP3.95□□□□□ -1.78
LINC01239-202ENST00000436786 ENO1P06733 434 aaKnown RBP3.95□□□□□ -1.78
LINC01239-202ENST00000436786 THBS1P07996 1170 aa3.95□□□□□ -1.78
LINC01239-202ENST00000436786 FCGR2AP12318 317 aa3.95□□□□□ -1.78
LINC01239-202ENST00000436786 PPP3CBP16298 524 aa3.95□□□□□ -1.78
LINC01239-202ENST00000436786 ATP5F1P24539 256 aaPredicted RBP3.95□□□□□ -1.78
LINC01239-202ENST00000436786 GCAP28676 217 aa3.95□□□□□ -1.78
LINC01239-202ENST00000436786 ECHS1P30084 290 aa3.95□□□□□ -1.78
LINC01239-202ENST00000436786 NR1H2P55055 460 aa3.95□□□□□ -1.78
LINC01239-202ENST00000436786 FOXA1P55317 472 aa3.95□□□□□ -1.78
LINC01239-202ENST00000436786 PKNOX1P55347 436 aa3.95□□□□□ -1.78
LINC01239-202ENST00000436786 CTBP2P56545 445 aa3.95□□□□□ -1.78
LINC01239-202ENST00000436786 RPS3AP61247 264 aaKnown RBP3.95□□□□□ -1.78
LINC01239-202ENST00000436786 PRR5P85299 388 aa3.95□□□□□ -1.78
LINC01239-202ENST00000436786 PPP2R2BQ00005 443 aa3.95□□□□□ -1.78
LINC01239-202ENST00000436786 OCRLQ01968 901 aa3.95□□□□□ -1.78
LINC01239-202ENST00000436786 CKAP4Q07065 602 aaKnown RBP3.95□□□□□ -1.78
LINC01239-202ENST00000436786 ZNF763Q0D2J5 394 aa3.95□□□□□ -1.78
LINC01239-202ENST00000436786 C17orf67Q0P5P2 114 aa3.95□□□□□ -1.78
LINC01239-202ENST00000436786 LCP2Q13094 533 aa3.95□□□□□ -1.78
LINC01239-202ENST00000436786 ZNHIT3Q15649 155 aaPredicted RBP3.95□□□□□ -1.78
LINC01239-202ENST00000436786 CTU2Q2VPK5 515 aaKnown RBP3.95□□□□□ -1.78
LINC01239-202ENST00000436786 BEX5Q5H9J7 111 aa3.95□□□□□ -1.78
LINC01239-202ENST00000436786 STAC2Q6ZMT1 411 aa3.95□□□□□ -1.78
LINC01239-202ENST00000436786 TIFABQ6ZNK6 161 aa3.95□□□□□ -1.78
LINC01239-202ENST00000436786 GALNT10Q86SR1 603 aa3.95□□□□□ -1.78
LINC01239-202ENST00000436786 EXOC3L1Q86VI1 746 aa3.95□□□□□ -1.78
LINC01239-202ENST00000436786 WFDC8Q8IUA0 241 aa3.95□□□□□ -1.78
LINC01239-202ENST00000436786 CCNYL1Q8N7R7 359 aa3.95□□□□□ -1.78
LINC01239-202ENST00000436786 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.95□□□□□ -1.78
LINC01239-202ENST00000436786 TMEM171Q8WVE6 324 aa3.95□□□□□ -1.78
LINC01239-202ENST00000436786 PIK3R3Q92569 461 aa3.95□□□□□ -1.78
LINC01239-202ENST00000436786 CAVIN3Q969G5 261 aa3.95□□□□□ -1.78
LINC01239-202ENST00000436786 GFM2Q969S9 779 aaKnown RBP3.95□□□□□ -1.78
LINC01239-202ENST00000436786 L3HYPDHQ96EM0 354 aa3.95□□□□□ -1.78
LINC01239-202ENST00000436786 PLPPR2Q96GM1 343 aa3.95□□□□□ -1.78
LINC01239-202ENST00000436786 LMF2Q9BU23 707 aaKnown RBP3.95□□□□□ -1.78
LINC01239-202ENST00000436786 PRRG4Q9BZD6 226 aa3.95□□□□□ -1.78
LINC01239-202ENST00000436786 TBL1XR1Q9BZK7 514 aa3.95□□□□□ -1.78
LINC01239-202ENST00000436786 SHCBP1LQ9BZQ2 653 aa3.95□□□□□ -1.78
LINC01239-202ENST00000436786 Q9N2J8 555 aa3.95□□□□□ -1.78
LINC01239-202ENST00000436786 MID1IP1Q9NPA3 183 aa3.95□□□□□ -1.78
LINC01239-202ENST00000436786 ZNF701Q9NV72 531 aaPredicted RBP3.95□□□□□ -1.78
LINC01239-202ENST00000436786 DDX18Q9NVP1 670 aaKnown RBP3.95□□□□□ -1.78
LINC01239-202ENST00000436786 TAS2R7Q9NYW3 318 aa3.95□□□□□ -1.78
LINC01239-202ENST00000436786 MRTO4Q9UKD2 239 aaKnown RBP3.95□□□□□ -1.78
LINC01239-202ENST00000436786 GRID1Q9ULK0 1009 aa3.95□□□□□ -1.78
LINC01239-202ENST00000436786 NFU1Q9UMS0 254 aa3.95□□□□□ -1.78
LINC01239-202ENST00000436786 VDAC3Q9Y277 283 aa3.95□□□□□ -1.78
LINC01239-202ENST00000436786 STK38LQ9Y2H1 464 aa3.95□□□□□ -1.78
LINC01239-202ENST00000436786 EMC9Q9Y3B6 208 aa3.95□□□□□ -1.78
LINC01239-202ENST00000436786 EXOC1LA0A1B0GW35 172 aa3.95□□□□□ -1.78
LINC01239-202ENST00000436786 CCDC151A5D8V7 595 aa3.95□□□□□ -1.78
LINC01239-202ENST00000436786 DBX1A6NMT0 343 aa3.95□□□□□ -1.78
LINC01239-202ENST00000436786 GOLGA8RI6L899 631 aa3.95□□□□□ -1.78
LINC01239-202ENST00000436786 HS3ST1O14792 307 aa3.95□□□□□ -1.78
LINC01239-202ENST00000436786 CXCL13O43927 109 aa3.95□□□□□ -1.78
LINC01239-202ENST00000436786 SS18L1O75177 396 aaPredicted RBP3.95□□□□□ -1.78
LINC01239-202ENST00000436786 SLITRK5O94991 958 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms