RNA–Protein interactions for RNA: ENST00000434046.6

SYNPO2-203, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-203ENST00000434046 CDV3Q9UKY7 258 aaKnown RBP6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 CLEC4EQ9ULY5 219 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 PCDHGA9Q9Y5G4 932 aaKnown RBP6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 F5P12259 2224 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 CEP290O15078 2479 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 SLC22A23A1A5C7 686 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 RNASET2O00584 256 aaKnown RBP6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 TSPAN6O43657 245 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 SDC3O75056 442 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 ERAL1O75616 437 aaKnown RBP6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 REM1O75628 298 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 KLHL18O94889 574 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 S100A6P06703 90 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 LPLP06858 475 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 ARAFP10398 606 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 MMP11P24347 488 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 RPL3P39023 403 aaKnown RBP6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 MVDP53602 400 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 PDGFRLQ15198 375 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 CCNJQ5T5M9 372 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 LIPJQ5W064 366 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 TMEM107Q6UX40 140 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 SYT9Q86SS6 491 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 C17orf64Q86WR6 236 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 OR2T4Q8NH00 348 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 OR56B4Q8NH76 319 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 C2CD4CQ8TF44 421 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 SENP5Q96HI0 755 aaPredicted RBP6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 FAM46AQ96IP4 442 aaKnown RBP6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 SLC6A18Q96N87 628 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 ABHD1Q96SE0 405 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 POLDIP3Q9BY77 421 aaKnown RBP6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 ZDHHC4Q9NPG8 344 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 EQTNQ9NQ60 294 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 MRTO4Q9UKD2 239 aaKnown RBP6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 POMT2Q9UKY4 750 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 TET1Q8NFU7 2136 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 CKAP5Q14008 2032 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 ANXA2P2A6NMY6 339 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 ZNF593O00488 134 aaPredicted RBP6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 STK25O00506 426 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 DVL2O14641 736 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 SGCEO43556 437 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 POP7O75817 140 aaKnown RBP6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 VNN2O95498 520 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 LDOC1O95751 146 aaPredicted RBP6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 HPXP02790 462 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 OR12D1P0DN82 309 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 ALPPL2P10696 532 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 PCSK2P16519 638 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 NOS3P29474 1203 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 AKR1C2P52895 323 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 B2MP61769 119 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 FLI1Q01543 452 aaPredicted RBP6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 AKR1C1Q04828 323 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 RIN1Q13671 783 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 OCLNQ16625 522 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 PLEKHS1Q5SXH7 462 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 MAMSTRQ6ZN01 415 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 MACC1Q6ZN28 852 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 ZFP82Q8N141 532 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 WDR48Q8TAF3 677 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 KLK6Q92876 244 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 GLYATL1Q969I3 302 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 RAD51AP1Q96B01 352 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 SLC12A9Q9BXP2 914 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 ACTR6Q9GZN1 396 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 RNF32Q9H0A6 362 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 GHITMQ9H3K2 345 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 IL21Q9HBE4 155 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 OR10H1Q9Y4A9 318 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 BRCA2P51587 3418 aa6.95□□□□□ -1.3
SYNPO2-203ENST00000434046 ARID1BQ8NFD5 2236 aaPredicted RBP6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 TBC1D3DA0A087WVF3 549 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 MEIKINA0A087WXM9 373 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 TBC1D3IA0A087WXS9 549 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 TBC1D3EA0A087X179 549 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 TBC1D3KA0A087X1G2 549 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 TRAV20A0A0B4J274 112 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 TBC1D3FA6NER0 549 aaPredicted RBP6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 TBC1D3LB9A6J9 549 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 H3BNC9 293 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 H7C0S8 307 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 RTCAO00442 366 aaKnown RBP6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 CREBL2O60519 120 aaPredicted RBP6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 DPM1O60762 260 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 GPR37L1O60883 481 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 UCHL1P09936 223 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 TBC1D3HP0C7X1 549 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 GNSP15586 552 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 CD9P21926 228 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 GPR4P46093 362 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 LSM11P83369 360 aaKnown RBP eCLIP6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 BAMBIQ13145 260 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 CAMK1Q14012 370 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 GK2Q14410 553 aaPredicted RBP6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 PLA1AQ53H76 456 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 HBMQ6B0K9 141 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 TBC1D3GQ6DHY5 549 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 OR5M10Q6IEU7 315 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms