RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 ATP12AP54707 1039 aa16.81■□□□□ 0.28
HMGN1-206ENST00000431390 EEF1A1P68104 462 aaKnown RBP16.81■□□□□ 0.28
HMGN1-206ENST00000431390 ZSWIM7Q19AV6 140 aa16.81■□□□□ 0.28
HMGN1-206ENST00000431390 TBC1D25Q3MII6 688 aa16.81■□□□□ 0.28
HMGN1-206ENST00000431390 ZNF836Q6ZNA1 936 aa16.81■□□□□ 0.28
HMGN1-206ENST00000431390 PPP1R32Q7Z5V6 425 aa16.81■□□□□ 0.28
HMGN1-206ENST00000431390 HMGN2P46Q86SG4 172 aa16.81■□□□□ 0.28
HMGN1-206ENST00000431390 DTX1Q86Y01 620 aa16.81■□□□□ 0.28
HMGN1-206ENST00000431390 ELP5Q8TE02 316 aa16.81■□□□□ 0.28
HMGN1-206ENST00000431390 DIO2Q92813 273 aa16.81■□□□□ 0.28
HMGN1-206ENST00000431390 TMBIM1Q969X1 311 aa16.81■□□□□ 0.28
HMGN1-206ENST00000431390 C9orf16Q9BUW7 83 aa16.81■□□□□ 0.28
HMGN1-206ENST00000431390 ARMC7Q9H6L4 198 aa16.81■□□□□ 0.28
HMGN1-206ENST00000431390 C8orf4Q9NR00 106 aa16.81■□□□□ 0.28
HMGN1-206ENST00000431390 CNOT11Q9UKZ1 510 aaKnown RBP16.81■□□□□ 0.28
HMGN1-206ENST00000431390 FAM32AQ9Y421 112 aaKnown RBP16.81■□□□□ 0.28
HMGN1-206ENST00000431390 CHST2Q9Y4C5 530 aa16.81■□□□□ 0.28
HMGN1-206ENST00000431390 FLNBO75369 2602 aaKnown RBP16.81■□□□□ 0.28
HMGN1-206ENST00000431390 NPIPA5A0A0B4J1W7 369 aa16.8■□□□□ 0.28
HMGN1-206ENST00000431390 CENPVL1A0A0U1RR11 272 aa16.8■□□□□ 0.28
HMGN1-206ENST00000431390 LOC101059948A0A1B0GTJ6 334 aa16.8■□□□□ 0.28
HMGN1-206ENST00000431390 NPIPA7E9PJI5 369 aa16.8■□□□□ 0.28
HMGN1-206ENST00000431390 ADAMDEC1O15204 470 aa16.8■□□□□ 0.28
HMGN1-206ENST00000431390 PRKNO60260 465 aaPredicted RBP16.8■□□□□ 0.28
HMGN1-206ENST00000431390 NPIPA8P0DM63 369 aa16.8■□□□□ 0.28
HMGN1-206ENST00000431390 KRT20P35900 424 aa16.8■□□□□ 0.28
HMGN1-206ENST00000431390 NRG3P56975 720 aa16.8■□□□□ 0.28
HMGN1-206ENST00000431390 LRRC36Q1X8D7 754 aa16.8■□□□□ 0.28
HMGN1-206ENST00000431390 BTBD16Q32M84 506 aa16.8■□□□□ 0.28
HMGN1-206ENST00000431390 COMTD1Q86VU5 262 aa16.8■□□□□ 0.28
HMGN1-206ENST00000431390 EPHX4Q8IUS5 362 aa16.8■□□□□ 0.28
HMGN1-206ENST00000431390 SVOPLQ8N434 492 aa16.8■□□□□ 0.28
HMGN1-206ENST00000431390 NKD1Q969G9 470 aa16.8■□□□□ 0.28
HMGN1-206ENST00000431390 LMF1Q96S06 567 aa16.8■□□□□ 0.28
HMGN1-206ENST00000431390 CIB1Q99828 191 aa16.8■□□□□ 0.28
HMGN1-206ENST00000431390 VCXQ9H320 206 aa16.8■□□□□ 0.28
HMGN1-206ENST00000431390 MMP25Q9NPA2 562 aa16.8■□□□□ 0.28
HMGN1-206ENST00000431390 OAZ3Q9UMX2 235 aa16.8■□□□□ 0.28
HMGN1-206ENST00000431390 DTNAQ9Y4J8 743 aa16.8■□□□□ 0.28
HMGN1-206ENST00000431390 NSG1A0A0A6YYJ2 146 aa16.79■□□□□ 0.28
HMGN1-206ENST00000431390 TSPAN2O60636 221 aa16.79■□□□□ 0.28
HMGN1-206ENST00000431390 DIRAS1O95057 198 aa16.79■□□□□ 0.28
HMGN1-206ENST00000431390 ZNF23P17027 643 aa16.79■□□□□ 0.28
HMGN1-206ENST00000431390 F8A1P23610 371 aa16.79■□□□□ 0.28
HMGN1-206ENST00000431390 ABCD3P28288 659 aa16.79■□□□□ 0.28
HMGN1-206ENST00000431390 OTX2P32243 289 aa16.79■□□□□ 0.28
HMGN1-206ENST00000431390 PLCXD2Q0VAA5 305 aa16.79■□□□□ 0.28
HMGN1-206ENST00000431390 CYP4Z1Q86W10 505 aa16.79■□□□□ 0.28
HMGN1-206ENST00000431390 CMIPQ8IY22 773 aa16.79■□□□□ 0.28
HMGN1-206ENST00000431390 TAGAPQ8N103 731 aa16.79■□□□□ 0.28
HMGN1-206ENST00000431390 OR4D11Q8NGI4 311 aa16.79■□□□□ 0.28
HMGN1-206ENST00000431390 OR5K1Q8NHB7 308 aa16.79■□□□□ 0.28
HMGN1-206ENST00000431390 VANGL1Q8TAA9 524 aaPredicted RBP16.79■□□□□ 0.28
HMGN1-206ENST00000431390 EFHD2Q96C19 240 aaPredicted RBP16.79■□□□□ 0.28
HMGN1-206ENST00000431390 NAF1Q96HR8 494 aaKnown RBP16.79■□□□□ 0.28
HMGN1-206ENST00000431390 PIP5K1AQ99755 562 aa16.79■□□□□ 0.28
HMGN1-206ENST00000431390 REEP1Q9H902 201 aa16.79■□□□□ 0.28
HMGN1-206ENST00000431390 UBQLN4Q9NRR5 601 aa16.79■□□□□ 0.28
HMGN1-206ENST00000431390 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.79■□□□□ 0.28
HMGN1-206ENST00000431390 CDC14CA4D256 554 aa16.78■□□□□ 0.28
HMGN1-206ENST00000431390 CDHR4A6H8M9 788 aa16.78■□□□□ 0.28
HMGN1-206ENST00000431390 SAC3D1A6NKF1 404 aa16.78■□□□□ 0.28
HMGN1-206ENST00000431390 M0R3H8 397 aa16.78■□□□□ 0.28
HMGN1-206ENST00000431390 IL12BP29460 328 aa16.78■□□□□ 0.28
HMGN1-206ENST00000431390 PNLIPRP2P54317 469 aa16.78■□□□□ 0.28
HMGN1-206ENST00000431390 GK3PQ14409 553 aa16.78■□□□□ 0.28
HMGN1-206ENST00000431390 FGFBP1Q14512 234 aa16.78■□□□□ 0.28
HMGN1-206ENST00000431390 PDZK1Q5T2W1 519 aa16.78■□□□□ 0.28
HMGN1-206ENST00000431390 MRPL2Q5T653 305 aaKnown RBP16.78■□□□□ 0.28
HMGN1-206ENST00000431390 TCTN3Q6NUS6 607 aa16.78■□□□□ 0.28
HMGN1-206ENST00000431390 ZBTB49Q6ZSB9 765 aa16.78■□□□□ 0.28
HMGN1-206ENST00000431390 RAB43Q86YS6 212 aa16.78■□□□□ 0.28
HMGN1-206ENST00000431390 LACC1Q8IV20 430 aa16.78■□□□□ 0.28
HMGN1-206ENST00000431390 CLIP4Q8N3C7 705 aa16.78■□□□□ 0.28
HMGN1-206ENST00000431390 IL22RA1Q8N6P7 574 aa16.78■□□□□ 0.28
HMGN1-206ENST00000431390 PACRGLQ8N7B6 248 aa16.78■□□□□ 0.28
HMGN1-206ENST00000431390 OR6T1Q8NGN1 323 aa16.78■□□□□ 0.28
HMGN1-206ENST00000431390 OMA1Q96E52 524 aa16.78■□□□□ 0.28
HMGN1-206ENST00000431390 EPYCQ99645 322 aa16.78■□□□□ 0.28
HMGN1-206ENST00000431390 TACO1Q9BSH4 297 aaKnown RBP16.78■□□□□ 0.28
HMGN1-206ENST00000431390 DEFB126Q9BYW3 111 aa16.78■□□□□ 0.28
HMGN1-206ENST00000431390 PRDM4Q9UKN5 801 aa16.78■□□□□ 0.28
HMGN1-206ENST00000431390 MGAQ8IWI9 3026 aa16.78■□□□□ 0.28
HMGN1-206ENST00000431390 EXPH5Q8NEV8 1989 aa16.78■□□□□ 0.28
HMGN1-206ENST00000431390 TMEM200CA6NKL6 621 aa16.77■□□□□ 0.28
HMGN1-206ENST00000431390 E2F6O75461 281 aa16.77■□□□□ 0.28
HMGN1-206ENST00000431390 REM1O75628 298 aa16.77■□□□□ 0.28
HMGN1-206ENST00000431390 HPP00738 406 aa16.77■□□□□ 0.28
HMGN1-206ENST00000431390 ICAM2P13598 275 aa16.77■□□□□ 0.28
HMGN1-206ENST00000431390 ZNF26P17031 533 aaPredicted RBP16.77■□□□□ 0.28
HMGN1-206ENST00000431390 RRM2P31350 389 aa16.77■□□□□ 0.28
HMGN1-206ENST00000431390 DNAJA1P31689 397 aaKnown RBP16.77■□□□□ 0.28
HMGN1-206ENST00000431390 PPP4R4Q6NUP7 873 aa16.77■□□□□ 0.28
HMGN1-206ENST00000431390 HIPK1Q86Z02 1210 aa16.77■□□□□ 0.28
HMGN1-206ENST00000431390 ZDHHC13Q8IUH4 622 aa16.77■□□□□ 0.28
HMGN1-206ENST00000431390 GRAMD2AQ8IUY3 354 aa16.77■□□□□ 0.28
HMGN1-206ENST00000431390 AMER2Q8N7J2 671 aa16.77■□□□□ 0.28
HMGN1-206ENST00000431390 ZNF527Q8NB42 609 aa16.77■□□□□ 0.28
HMGN1-206ENST00000431390 NR4A3Q92570 626 aa16.77■□□□□ 0.28
HMGN1-206ENST00000431390 SLC35B4Q969S0 331 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms