RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 SLC44A2Q8IWA5 706 aaPredicted RBP15.42■□□□□ 0.06
UBE3D-204ENST00000430071 WDSUB1Q8N9V3 476 aa15.42■□□□□ 0.06
UBE3D-204ENST00000430071 NAXEQ8NCW5 288 aa15.42■□□□□ 0.06
UBE3D-204ENST00000430071 OR56A1Q8NGH5 318 aa15.42■□□□□ 0.06
UBE3D-204ENST00000430071 FBXO30Q8TB52 745 aa15.42■□□□□ 0.06
UBE3D-204ENST00000430071 OTUB1Q96FW1 271 aaPredicted RBP15.42■□□□□ 0.06
UBE3D-204ENST00000430071 TMEM41AQ96HV5 264 aa15.42■□□□□ 0.06
UBE3D-204ENST00000430071 ITCHQ96J02 903 aa15.42■□□□□ 0.06
UBE3D-204ENST00000430071 SECISBP2Q96T21 854 aaKnown RBP15.42■□□□□ 0.06
UBE3D-204ENST00000430071 SPOCK3Q9BQ16 436 aa15.42■□□□□ 0.06
UBE3D-204ENST00000430071 YIPF4Q9BSR8 244 aa15.42■□□□□ 0.06
UBE3D-204ENST00000430071 LMF2Q9BU23 707 aaKnown RBP15.42■□□□□ 0.06
UBE3D-204ENST00000430071 RMND5AQ9H871 391 aa15.42■□□□□ 0.06
UBE3D-204ENST00000430071 A0A1W2PP18 115 aa15.41■□□□□ 0.06
UBE3D-204ENST00000430071 TSPAN2O60636 221 aa15.41■□□□□ 0.06
UBE3D-204ENST00000430071 WDR1O75083 606 aa15.41■□□□□ 0.06
UBE3D-204ENST00000430071 HOXB9P17482 250 aaPredicted RBP15.41■□□□□ 0.06
UBE3D-204ENST00000430071 BMP7P18075 431 aa15.41■□□□□ 0.06
UBE3D-204ENST00000430071 DLX5P56178 289 aa15.41■□□□□ 0.06
UBE3D-204ENST00000430071 LASP1Q14847 261 aaKnown RBP15.41■□□□□ 0.06
UBE3D-204ENST00000430071 TOMM20Q15388 145 aa15.41■□□□□ 0.06
UBE3D-204ENST00000430071 GTDC1Q4AE62 458 aa15.41■□□□□ 0.06
UBE3D-204ENST00000430071 PLXDC2Q6UX71 529 aa15.41■□□□□ 0.06
UBE3D-204ENST00000430071 ZNF621Q6ZSS3 439 aa15.41■□□□□ 0.06
UBE3D-204ENST00000430071 C6orf120Q7Z4R8 191 aa15.41■□□□□ 0.06
UBE3D-204ENST00000430071 SLC16A11Q8NCK7 471 aa15.41■□□□□ 0.06
UBE3D-204ENST00000430071 FAM83FQ8NEG4 500 aaPredicted RBP15.41■□□□□ 0.06
UBE3D-204ENST00000430071 OR1J4Q8NGS1 313 aa15.41■□□□□ 0.06
UBE3D-204ENST00000430071 MOAP1Q96BY2 351 aa15.41■□□□□ 0.06
UBE3D-204ENST00000430071 ADOQ96SZ5 270 aa15.41■□□□□ 0.06
UBE3D-204ENST00000430071 OSBPL11Q9BXB4 747 aa15.41■□□□□ 0.06
UBE3D-204ENST00000430071 UGT2B28Q9BY64 529 aa15.41■□□□□ 0.06
UBE3D-204ENST00000430071 PAIP1Q9H074 479 aaKnown RBP15.41■□□□□ 0.06
UBE3D-204ENST00000430071 MYLK2Q9H1R3 596 aa15.41■□□□□ 0.06
UBE3D-204ENST00000430071 SERHL2Q9H4I8 314 aa15.41■□□□□ 0.06
UBE3D-204ENST00000430071 RUBCNLQ9H714 662 aa15.41■□□□□ 0.06
UBE3D-204ENST00000430071 KCNJ16Q9NPI9 418 aa15.41■□□□□ 0.06
UBE3D-204ENST00000430071 ARL2BPQ9Y2Y0 163 aa15.41■□□□□ 0.06
UBE3D-204ENST00000430071 SNPHO15079 494 aa15.4■□□□□ 0.06
UBE3D-204ENST00000430071 ACOX3O15254 700 aa15.4■□□□□ 0.06
UBE3D-204ENST00000430071 CCDC22O60826 627 aa15.4■□□□□ 0.06
UBE3D-204ENST00000430071 NKX2-2O95096 273 aa15.4■□□□□ 0.06
UBE3D-204ENST00000430071 MSX1P28360 303 aa15.4■□□□□ 0.06
UBE3D-204ENST00000430071 RPS26P62854 115 aaKnown RBP15.4■□□□□ 0.06
UBE3D-204ENST00000430071 DUSP5Q16690 384 aa15.4■□□□□ 0.06
UBE3D-204ENST00000430071 C6orf10Q5SRN2 563 aa15.4■□□□□ 0.06
UBE3D-204ENST00000430071 SAXO2Q658L1 398 aa15.4■□□□□ 0.06
UBE3D-204ENST00000430071 VASNQ6EMK4 673 aa15.4■□□□□ 0.06
UBE3D-204ENST00000430071 OR5M10Q6IEU7 315 aa15.4■□□□□ 0.06
UBE3D-204ENST00000430071 RETREG3Q86VR2 466 aa15.4■□□□□ 0.06
UBE3D-204ENST00000430071 CDRT4Q8N9R6 151 aa15.4■□□□□ 0.06
UBE3D-204ENST00000430071 TNIP2Q8NFZ5 429 aa15.4■□□□□ 0.06
UBE3D-204ENST00000430071 TSPEARQ8WU66 669 aa15.4■□□□□ 0.06
UBE3D-204ENST00000430071 SLC9A6Q92581 669 aa15.4■□□□□ 0.06
UBE3D-204ENST00000430071 EFHD2Q96C19 240 aaPredicted RBP15.4■□□□□ 0.06
UBE3D-204ENST00000430071 SLC35A5Q9BS91 424 aa15.4■□□□□ 0.06
UBE3D-204ENST00000430071 CCDC106Q9BWC9 280 aa15.4■□□□□ 0.06
UBE3D-204ENST00000430071 MRGBPQ9NV56 204 aa15.4■□□□□ 0.06
UBE3D-204ENST00000430071 KLRF1Q9NZS2 232 aa15.4■□□□□ 0.06
UBE3D-204ENST00000430071 FLRT3Q9NZU0 649 aa15.4■□□□□ 0.06
UBE3D-204ENST00000430071 SLAMF8Q9P0V8 285 aa15.4■□□□□ 0.06
UBE3D-204ENST00000430071 B4GALT7Q9UBV7 327 aa15.4■□□□□ 0.06
UBE3D-204ENST00000430071 CAPN7Q9Y6W3 813 aa15.4■□□□□ 0.06
UBE3D-204ENST00000430071 HEATR5AQ86XA9 2040 aa15.4■□□□□ 0.06
UBE3D-204ENST00000430071 GXYLT2A0PJZ3 443 aa15.39■□□□□ 0.05
UBE3D-204ENST00000430071 PRAMEF25A6NGN4 478 aa15.39■□□□□ 0.05
UBE3D-204ENST00000430071 ZCCHC18P0CG32 403 aa15.39■□□□□ 0.05
UBE3D-204ENST00000430071 ADSLP30566 484 aaPredicted RBP15.39■□□□□ 0.05
UBE3D-204ENST00000430071 GABRA3P34903 492 aa15.39■□□□□ 0.05
UBE3D-204ENST00000430071 PRIM2P49643 509 aa15.39■□□□□ 0.05
UBE3D-204ENST00000430071 CASP9P55211 416 aa15.39■□□□□ 0.05
UBE3D-204ENST00000430071 ZNHIT3Q15649 155 aaPredicted RBP15.39■□□□□ 0.05
UBE3D-204ENST00000430071 SLC30A6Q6NXT4 461 aa15.39■□□□□ 0.05
UBE3D-204ENST00000430071 TMEM81Q6P7N7 255 aa15.39■□□□□ 0.05
UBE3D-204ENST00000430071 ZCCHC12Q6PEW1 402 aa15.39■□□□□ 0.05
UBE3D-204ENST00000430071 BHLHB9Q6PI77 547 aa15.39■□□□□ 0.05
UBE3D-204ENST00000430071 TREML1Q86YW5 311 aa15.39■□□□□ 0.05
UBE3D-204ENST00000430071 MSRB3Q8IXL7 192 aa15.39■□□□□ 0.05
UBE3D-204ENST00000430071 TRIML2Q8N7C3 387 aa15.39■□□□□ 0.05
UBE3D-204ENST00000430071 RELL2Q8NC24 303 aaPredicted RBP15.39■□□□□ 0.05
UBE3D-204ENST00000430071 PIK3R3Q92569 461 aa15.39■□□□□ 0.05
UBE3D-204ENST00000430071 JADE3Q92613 823 aa15.39■□□□□ 0.05
UBE3D-204ENST00000430071 NEURL3Q96EH8 262 aa15.39■□□□□ 0.05
UBE3D-204ENST00000430071 AURKBQ96GD4 344 aaPredicted RBP15.39■□□□□ 0.05
UBE3D-204ENST00000430071 WDYHV1Q96HA8 205 aa15.39■□□□□ 0.05
UBE3D-204ENST00000430071 COL21A1Q96P44 957 aa15.39■□□□□ 0.05
UBE3D-204ENST00000430071 ACTRT3Q9BYD9 372 aa15.39■□□□□ 0.05
UBE3D-204ENST00000430071 RTN4RQ9BZR6 473 aa15.39■□□□□ 0.05
UBE3D-204ENST00000430071 RYDENQ9NUL5 291 aaKnown RBP15.39■□□□□ 0.05
UBE3D-204ENST00000430071 SLC25A37Q9NYZ2 338 aa15.39■□□□□ 0.05
UBE3D-204ENST00000430071 FBXL2Q9UKC9 423 aa15.39■□□□□ 0.05
UBE3D-204ENST00000430071 CAMK2AQ9UQM7 478 aa15.39■□□□□ 0.05
UBE3D-204ENST00000430071 NDUFAF1Q9Y375 327 aa15.39■□□□□ 0.05
UBE3D-204ENST00000430071 HIVEP1P15822 2718 aa15.39■□□□□ 0.05
UBE3D-204ENST00000430071 A0A096LPI6 279 aa15.38■□□□□ 0.05
UBE3D-204ENST00000430071 OR6C70A6NIJ9 312 aa15.38■□□□□ 0.05
UBE3D-204ENST00000430071 FBP2O00757 339 aa15.38■□□□□ 0.05
UBE3D-204ENST00000430071 SLC22A2O15244 555 aa15.38■□□□□ 0.05
UBE3D-204ENST00000430071 GABRA1P14867 456 aa15.38■□□□□ 0.05
UBE3D-204ENST00000430071 TCEA1P23193 301 aaKnown RBP15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms