RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 ACTL6AO96019 429 aa13.47□□□□□ -0.25
RTN4-210ENST00000427710 TBXA2RP21731 343 aa13.47□□□□□ -0.25
RTN4-210ENST00000427710 GCKP35557 465 aa13.47□□□□□ -0.25
RTN4-210ENST00000427710 CDKN2CP42773 168 aa13.47□□□□□ -0.25
RTN4-210ENST00000427710 ZFP36L2P47974 494 aaKnown RBP13.47□□□□□ -0.25
RTN4-210ENST00000427710 LHX2P50458 406 aa13.47□□□□□ -0.25
RTN4-210ENST00000427710 AGFG1P52594 562 aaKnown RBP13.47□□□□□ -0.25
RTN4-210ENST00000427710 CLNS1AP54105 237 aaKnown RBP13.47□□□□□ -0.25
RTN4-210ENST00000427710 ANXA8L1Q5VT79 327 aa13.47□□□□□ -0.25
RTN4-210ENST00000427710 RAET1LQ5VY80 246 aa13.47□□□□□ -0.25
RTN4-210ENST00000427710 TNFAIP8L2Q6P589 184 aaPredicted RBP13.47□□□□□ -0.25
RTN4-210ENST00000427710 ARSKQ6UWY0 536 aa13.47□□□□□ -0.25
RTN4-210ENST00000427710 PM20D2Q8IYS1 436 aa13.47□□□□□ -0.25
RTN4-210ENST00000427710 LRRC34Q8IZ02 419 aa13.47□□□□□ -0.25
RTN4-210ENST00000427710 PIWIL2Q8TC59 973 aaKnown RBP13.47□□□□□ -0.25
RTN4-210ENST00000427710 DYDC1Q8WWB3 177 aa13.47□□□□□ -0.25
RTN4-210ENST00000427710 MOAP1Q96BY2 351 aa13.47□□□□□ -0.25
RTN4-210ENST00000427710 C1GALT1C1Q96EU7 318 aa13.47□□□□□ -0.25
RTN4-210ENST00000427710 MAELQ96JY0 434 aaKnown RBP13.47□□□□□ -0.25
RTN4-210ENST00000427710 NPAS1Q99742 590 aa13.47□□□□□ -0.25
RTN4-210ENST00000427710 OR51I1Q9H343 314 aa13.47□□□□□ -0.25
RTN4-210ENST00000427710 DUSP22Q9NRW4 184 aa13.47□□□□□ -0.25
RTN4-210ENST00000427710 PCDHGB4Q9UN71 923 aa13.47□□□□□ -0.25
RTN4-210ENST00000427710 VDAC3Q9Y277 283 aa13.47□□□□□ -0.25
RTN4-210ENST00000427710 USH1CQ9Y6N9 552 aa13.47□□□□□ -0.25
RTN4-210ENST00000427710 DCHS2Q6V1P9 2916 aa13.46□□□□□ -0.25
RTN4-210ENST00000427710 HMGB1P1B2RPK0 211 aaPredicted RBP13.46□□□□□ -0.25
RTN4-210ENST00000427710 ALG1L2C9J202 215 aa13.46□□□□□ -0.25
RTN4-210ENST00000427710 H0YC42 278 aa13.46□□□□□ -0.25
RTN4-210ENST00000427710 HNRNPRO43390 633 aaKnown RBP13.46□□□□□ -0.25
RTN4-210ENST00000427710 GSNP06396 782 aa13.46□□□□□ -0.25
RTN4-210ENST00000427710 HOXD4P09016 255 aaPredicted RBP13.46□□□□□ -0.25
RTN4-210ENST00000427710 OR12D1P0DN82 309 aa13.46□□□□□ -0.25
RTN4-210ENST00000427710 COX6B1P14854 86 aa13.46□□□□□ -0.25
RTN4-210ENST00000427710 ATP6V1C1P21283 382 aa13.46□□□□□ -0.25
RTN4-210ENST00000427710 TPD52P55327 224 aaPredicted RBP13.46□□□□□ -0.25
RTN4-210ENST00000427710 PPP2R2AP63151 447 aa13.46□□□□□ -0.25
RTN4-210ENST00000427710 C17orf67Q0P5P2 114 aa13.46□□□□□ -0.25
RTN4-210ENST00000427710 CD226Q15762 336 aa13.46□□□□□ -0.25
RTN4-210ENST00000427710 NDUFAF6Q330K2 333 aa13.46□□□□□ -0.25
RTN4-210ENST00000427710 RIPPLY2Q5TAB7 128 aa13.46□□□□□ -0.25
RTN4-210ENST00000427710 UBQLNLQ8IYU4 475 aa13.46□□□□□ -0.25
RTN4-210ENST00000427710 ZNF614Q8N883 585 aa13.46□□□□□ -0.25
RTN4-210ENST00000427710 C9orf106Q8NAJ2 232 aa13.46□□□□□ -0.25
RTN4-210ENST00000427710 OR9I1Q8NGQ6 314 aa13.46□□□□□ -0.25
RTN4-210ENST00000427710 ACTRT2Q8TDY3 377 aa13.46□□□□□ -0.25
RTN4-210ENST00000427710 SMPDL3BQ92485 455 aa13.46□□□□□ -0.25
RTN4-210ENST00000427710 RAB8BQ92930 207 aa13.46□□□□□ -0.25
RTN4-210ENST00000427710 G6PC3Q9BUM1 346 aa13.46□□□□□ -0.25
RTN4-210ENST00000427710 VIPAS39Q9H9C1 493 aa13.46□□□□□ -0.25
RTN4-210ENST00000427710 CHST11Q9NPF2 352 aa13.46□□□□□ -0.25
RTN4-210ENST00000427710 NPDC1Q9NQX5 325 aaPredicted RBP13.46□□□□□ -0.25
RTN4-210ENST00000427710 MRPS18CQ9Y3D5 142 aaKnown RBP13.46□□□□□ -0.25
RTN4-210ENST00000427710 ZNF337Q9Y3M9 751 aa13.46□□□□□ -0.25
RTN4-210ENST00000427710 PCDHGB3Q9Y5G1 929 aa13.46□□□□□ -0.25
RTN4-210ENST00000427710 CREBBPQ92793 2442 aa13.45□□□□□ -0.26
RTN4-210ENST00000427710 TEX15Q9BXT5 2789 aa13.45□□□□□ -0.26
RTN4-210ENST00000427710 AKAP6Q13023 2319 aa13.45□□□□□ -0.26
RTN4-210ENST00000427710 OR2M5A3KFT3 312 aa13.45□□□□□ -0.26
RTN4-210ENST00000427710 CLCA1A8K7I4 914 aa13.45□□□□□ -0.26
RTN4-210ENST00000427710 H3BML4 177 aa13.45□□□□□ -0.26
RTN4-210ENST00000427710 SCDO00767 359 aa13.45□□□□□ -0.26
RTN4-210ENST00000427710 KRT16P08779 473 aa13.45□□□□□ -0.26
RTN4-210ENST00000427710 HPGDP15428 266 aa13.45□□□□□ -0.26
RTN4-210ENST00000427710 UQCRC2P22695 453 aa13.45□□□□□ -0.26
RTN4-210ENST00000427710 PTGER4P35408 488 aa13.45□□□□□ -0.26
RTN4-210ENST00000427710 CLDN18P56856 261 aa13.45□□□□□ -0.26
RTN4-210ENST00000427710 TFF3Q07654 80 aa13.45□□□□□ -0.26
RTN4-210ENST00000427710 SNTB1Q13884 538 aaKnown RBP13.45□□□□□ -0.26
RTN4-210ENST00000427710 FLYWCH1Q4VC44 716 aa13.45□□□□□ -0.26
RTN4-210ENST00000427710 PDCD4Q53EL6 469 aaKnown RBP13.45□□□□□ -0.26
RTN4-210ENST00000427710 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.45□□□□□ -0.26
RTN4-210ENST00000427710 NSUN5P2Q63ZY6 315 aa13.45□□□□□ -0.26
RTN4-210ENST00000427710 AAGABQ6PD74 315 aa13.45□□□□□ -0.26
RTN4-210ENST00000427710 EPGNQ6UW88 154 aa13.45□□□□□ -0.26
RTN4-210ENST00000427710 ENPP6Q6UWR7 440 aa13.45□□□□□ -0.26
RTN4-210ENST00000427710 MEX3BQ6ZN04 569 aaKnown RBP13.45□□□□□ -0.26
RTN4-210ENST00000427710 RELL2Q8NC24 303 aaPredicted RBP13.45□□□□□ -0.26
RTN4-210ENST00000427710 VPS37AQ8NEZ2 397 aa13.45□□□□□ -0.26
RTN4-210ENST00000427710 PHOSPHO1Q8TCT1 267 aa13.45□□□□□ -0.26
RTN4-210ENST00000427710 ARSGQ96EG1 525 aa13.45□□□□□ -0.26
RTN4-210ENST00000427710 THOC1Q96FV9 657 aaKnown RBP13.45□□□□□ -0.26
RTN4-210ENST00000427710 C7orf26Q96N11 449 aa13.45□□□□□ -0.26
RTN4-210ENST00000427710 OR52E6Q96RD3 313 aa13.45□□□□□ -0.26
RTN4-210ENST00000427710 SDF2Q99470 211 aa13.45□□□□□ -0.26
RTN4-210ENST00000427710 ZBTB18Q99592 522 aa13.45□□□□□ -0.26
RTN4-210ENST00000427710 EBF4Q9BQW3 602 aa13.45□□□□□ -0.26
RTN4-210ENST00000427710 SLC35A5Q9BS91 424 aa13.45□□□□□ -0.26
RTN4-210ENST00000427710 PTGES2Q9H7Z7 377 aa13.45□□□□□ -0.26
RTN4-210ENST00000427710 KCNJ16Q9NPI9 418 aa13.45□□□□□ -0.26
RTN4-210ENST00000427710 UBQLN4Q9NRR5 601 aa13.45□□□□□ -0.26
RTN4-210ENST00000427710 INTS9Q9NV88 658 aaKnown RBP13.45□□□□□ -0.26
RTN4-210ENST00000427710 APCP25054 2843 aa13.44□□□□□ -0.26
RTN4-210ENST00000427710 IGLV3-32A0A0A0MS00 114 aa13.44□□□□□ -0.26
RTN4-210ENST00000427710 CENPVL1A0A0U1RR11 272 aa13.44□□□□□ -0.26
RTN4-210ENST00000427710 UBDO15205 165 aa13.44□□□□□ -0.26
RTN4-210ENST00000427710 SEC14L5O43304 696 aa13.44□□□□□ -0.26
RTN4-210ENST00000427710 TNFRSF21O75509 655 aa13.44□□□□□ -0.26
RTN4-210ENST00000427710 OPN1LWP04000 364 aa13.44□□□□□ -0.26
RTN4-210ENST00000427710 PGRP06401 933 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms