RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 UQCRC1P31930 480 aa12.5□□□□□ -0.41
USP42-203ENST00000426246 UGT2B10P36537 528 aa12.5□□□□□ -0.41
USP42-203ENST00000426246 CSNK1G2P78368 415 aa12.5□□□□□ -0.41
USP42-203ENST00000426246 OC90Q02509 493 aaPredicted RBP12.5□□□□□ -0.41
USP42-203ENST00000426246 ILKQ13418 452 aa12.5□□□□□ -0.41
USP42-203ENST00000426246 KLHL22Q53GT1 634 aa12.5□□□□□ -0.41
USP42-203ENST00000426246 TRMT12Q53H54 448 aaKnown RBP12.5□□□□□ -0.41
USP42-203ENST00000426246 SAXO2Q658L1 398 aa12.5□□□□□ -0.41
USP42-203ENST00000426246 UBQLNLQ8IYU4 475 aa12.5□□□□□ -0.41
USP42-203ENST00000426246 SLC25A18Q9H1K4 315 aa12.5□□□□□ -0.41
USP42-203ENST00000426246 TMEM38AQ9H6F2 299 aa12.5□□□□□ -0.41
USP42-203ENST00000426246 BRD7Q9NPI1 651 aa12.5□□□□□ -0.41
USP42-203ENST00000426246 REV1Q9UBZ9 1251 aa12.5□□□□□ -0.41
USP42-203ENST00000426246 AK6Q9Y3D8 172 aaKnown RBP12.5□□□□□ -0.41
USP42-203ENST00000426246 SEMA3DO95025 777 aa12.5□□□□□ -0.41
USP42-203ENST00000426246 KAT7O95251 611 aa12.5□□□□□ -0.41
USP42-203ENST00000426246 SEMG1P04279 462 aa12.5□□□□□ -0.41
USP42-203ENST00000426246 ZNF888P0CJ79 500 aaPredicted RBP12.5□□□□□ -0.41
USP42-203ENST00000426246 GABRB1P18505 474 aa12.5□□□□□ -0.41
USP42-203ENST00000426246 SDK2Q58EX2 2172 aa12.5□□□□□ -0.41
USP42-203ENST00000426246 C1QTNF12Q5T7M4 302 aa12.5□□□□□ -0.41
USP42-203ENST00000426246 KIF18BQ86Y91 864 aa12.5□□□□□ -0.41
USP42-203ENST00000426246 COX18Q8N8Q8 333 aa12.5□□□□□ -0.41
USP42-203ENST00000426246 OR13C2Q8NGS9 318 aa12.5□□□□□ -0.41
USP42-203ENST00000426246 CAMK1GQ96NX5 476 aa12.5□□□□□ -0.41
USP42-203ENST00000426246 CCDC3Q9BQI4 270 aa12.5□□□□□ -0.41
USP42-203ENST00000426246 PSD2Q9BQI7 771 aa12.5□□□□□ -0.41
USP42-203ENST00000426246 ENKD1Q9H0I2 346 aa12.5□□□□□ -0.41
USP42-203ENST00000426246 PRSS16Q9NQE7 514 aa12.5□□□□□ -0.41
USP42-203ENST00000426246 MYEF2Q9P2K5 600 aaKnown RBP12.5□□□□□ -0.41
USP42-203ENST00000426246 MAPRE3Q9UPY8 281 aa12.5□□□□□ -0.41
USP42-203ENST00000426246 RASD1Q9Y272 281 aa12.5□□□□□ -0.41
USP42-203ENST00000426246 SH3D21A4FU49 640 aa12.49□□□□□ -0.41
USP42-203ENST00000426246 EIF3FO00303 357 aaPredicted RBP12.49□□□□□ -0.41
USP42-203ENST00000426246 LYRM1O43325 122 aa12.49□□□□□ -0.41
USP42-203ENST00000426246 OR2B3O76000 313 aa12.49□□□□□ -0.41
USP42-203ENST00000426246 SNRPNP63162 240 aaKnown RBP12.49□□□□□ -0.41
USP42-203ENST00000426246 NDUFAF6Q330K2 333 aa12.49□□□□□ -0.41
USP42-203ENST00000426246 PRR23CQ6ZRP0 262 aa12.49□□□□□ -0.41
USP42-203ENST00000426246 NOXA1Q86UR1 476 aa12.49□□□□□ -0.41
USP42-203ENST00000426246 KLHL36Q8N4N3 616 aa12.49□□□□□ -0.41
USP42-203ENST00000426246 TBC1D19Q8N5T2 526 aa12.49□□□□□ -0.41
USP42-203ENST00000426246 PROKR2Q8NFJ6 384 aa12.49□□□□□ -0.41
USP42-203ENST00000426246 FBLIM1Q8WUP2 373 aa12.49□□□□□ -0.41
USP42-203ENST00000426246 CCDC59Q9P031 241 aaKnown RBP12.49□□□□□ -0.41
USP42-203ENST00000426246 CHST2Q9Y4C5 530 aa12.49□□□□□ -0.41
USP42-203ENST00000426246 PRRC2CQ9Y520 2896 aaKnown RBP12.49□□□□□ -0.41
USP42-203ENST00000426246 B4DXG7 233 aa12.49□□□□□ -0.41
USP42-203ENST00000426246 GABRPO00591 440 aa12.49□□□□□ -0.41
USP42-203ENST00000426246 OR10H2O60403 315 aa12.49□□□□□ -0.41
USP42-203ENST00000426246 GATBO75879 557 aaKnown RBP12.49□□□□□ -0.41
USP42-203ENST00000426246 GDI1P31150 447 aa12.49□□□□□ -0.41
USP42-203ENST00000426246 SUZ12Q15022 739 aaKnown RBP12.49□□□□□ -0.41
USP42-203ENST00000426246 SLX4IPQ5VYV7 408 aa12.49□□□□□ -0.41
USP42-203ENST00000426246 CXXC5Q7LFL8 322 aaKnown RBP12.49□□□□□ -0.41
USP42-203ENST00000426246 LILRB4Q8NHJ6 448 aa12.49□□□□□ -0.41
USP42-203ENST00000426246 DEDD2Q8WXF8 326 aa12.49□□□□□ -0.41
USP42-203ENST00000426246 MICU1Q9BPX6 476 aa12.49□□□□□ -0.41
USP42-203ENST00000426246 SPATA5L1Q9BVQ7 753 aa12.49□□□□□ -0.41
USP42-203ENST00000426246 SRRQ9GZT4 340 aa12.49□□□□□ -0.41
USP42-203ENST00000426246 MED28Q9H204 178 aa12.49□□□□□ -0.41
USP42-203ENST00000426246 MIXL1Q9H2W2 232 aa12.49□□□□□ -0.41
USP42-203ENST00000426246 SRMSQ9H3Y6 488 aa12.49□□□□□ -0.41
USP42-203ENST00000426246 PLCXD1Q9NUJ7 323 aa12.49□□□□□ -0.41
USP42-203ENST00000426246 A0A075B6Q4 140 aa12.49□□□□□ -0.41
USP42-203ENST00000426246 CCDC85CA6NKD9 419 aa12.49□□□□□ -0.41
USP42-203ENST00000426246 PROM1O43490 865 aa12.49□□□□□ -0.41
USP42-203ENST00000426246 RECKO95980 971 aa12.49□□□□□ -0.41
USP42-203ENST00000426246 YES1P07947 543 aa12.49□□□□□ -0.41
USP42-203ENST00000426246 PRPH2P23942 346 aa12.49□□□□□ -0.41
USP42-203ENST00000426246 IFNGR2P38484 337 aa12.49□□□□□ -0.41
USP42-203ENST00000426246 SLC1A3P43003 542 aa12.49□□□□□ -0.41
USP42-203ENST00000426246 CCR6P51684 374 aa12.49□□□□□ -0.41
USP42-203ENST00000426246 ST3GAL3Q11203 375 aa12.49□□□□□ -0.41
USP42-203ENST00000426246 FAAP20Q6NZ36 180 aa12.49□□□□□ -0.41
USP42-203ENST00000426246 TMEM99Q8N816 258 aa12.49□□□□□ -0.41
USP42-203ENST00000426246 CREB3L4Q8TEY5 395 aa12.49□□□□□ -0.41
USP42-203ENST00000426246 AP3S1Q92572 193 aa12.49□□□□□ -0.41
USP42-203ENST00000426246 SGPP1Q9BX95 441 aa12.49□□□□□ -0.41
USP42-203ENST00000426246 GSDMCQ9BYG8 508 aa12.49□□□□□ -0.41
USP42-203ENST00000426246 PPIL3Q9H2H8 161 aaKnown RBP12.49□□□□□ -0.41
USP42-203ENST00000426246 HINT3Q9NQE9 182 aaKnown RBP12.49□□□□□ -0.41
USP42-203ENST00000426246 PHPT1Q9NRX4 125 aaPredicted RBP12.49□□□□□ -0.41
USP42-203ENST00000426246 SIRT3Q9NTG7 399 aaPredicted RBP12.49□□□□□ -0.41
USP42-203ENST00000426246 HYKKA2RU49 373 aa12.48□□□□□ -0.41
USP42-203ENST00000426246 FAM172BPA6NC97 362 aa12.48□□□□□ -0.41
USP42-203ENST00000426246 ZSCAN5BA6NJL1 495 aa12.48□□□□□ -0.41
USP42-203ENST00000426246 FOXE1O00358 373 aaPredicted RBP12.48□□□□□ -0.41
USP42-203ENST00000426246 FBXO45P0C2W1 286 aa12.48□□□□□ -0.41
USP42-203ENST00000426246 SNRPBP14678 240 aaKnown RBP12.48□□□□□ -0.41
USP42-203ENST00000426246 HIST1H1TP22492 207 aaPredicted RBP12.48□□□□□ -0.41
USP42-203ENST00000426246 HNRNPFP52597 415 aaKnown RBP12.48□□□□□ -0.41
USP42-203ENST00000426246 AP2S1P53680 142 aaPredicted RBP12.48□□□□□ -0.41
USP42-203ENST00000426246 DSG2Q14126 1118 aa12.48□□□□□ -0.41
USP42-203ENST00000426246 CCDC58Q4VC31 144 aa12.48□□□□□ -0.41
USP42-203ENST00000426246 LYPD4Q6UWN0 246 aa12.48□□□□□ -0.41
USP42-203ENST00000426246 PRSS41Q7RTY9 318 aa12.48□□□□□ -0.41
USP42-203ENST00000426246 CDK20Q8IZL9 346 aa12.48□□□□□ -0.41
USP42-203ENST00000426246 CHCHD4Q8N4Q1 142 aa12.48□□□□□ -0.41
USP42-203ENST00000426246 SDR9C7Q8NEX9 313 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms