RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 ZIC2O95409 532 aaPredicted RBP9.95□□□□□ -0.82
CUX1-205ENST00000425244 ATP6V1E1P36543 226 aa9.95□□□□□ -0.82
CUX1-205ENST00000425244 NR4A2P43354 598 aa9.95□□□□□ -0.82
CUX1-205ENST00000425244 CAV3P56539 151 aa9.95□□□□□ -0.82
CUX1-205ENST00000425244 YPEL5P62699 121 aa9.95□□□□□ -0.82
CUX1-205ENST00000425244 SIM1P81133 766 aaPredicted RBP9.95□□□□□ -0.82
CUX1-205ENST00000425244 ILF3Q12906 894 aaKnown RBP eCLIP9.95□□□□□ -0.824e-7■■■■□ 21.7
CUX1-205ENST00000425244 DEFB134Q4QY38 66 aa9.95□□□□□ -0.82
CUX1-205ENST00000425244 FAM131AQ6UXB0 335 aa9.95□□□□□ -0.82
CUX1-205ENST00000425244 TAF8Q7Z7C8 310 aa9.95□□□□□ -0.82
CUX1-205ENST00000425244 ZNF761Q86XN6 746 aaPredicted RBP9.95□□□□□ -0.82
CUX1-205ENST00000425244 NRMQ8IXM6 262 aa9.95□□□□□ -0.82
CUX1-205ENST00000425244 OR7G2Q8NG99 324 aa9.95□□□□□ -0.82
CUX1-205ENST00000425244 GIMAP1Q8WWP7 306 aa9.95□□□□□ -0.82
CUX1-205ENST00000425244 TM9SF4Q92544 642 aa9.95□□□□□ -0.82
CUX1-205ENST00000425244 CDS1Q92903 461 aa9.95□□□□□ -0.82
CUX1-205ENST00000425244 CLDN23Q96B33 292 aa9.95□□□□□ -0.82
CUX1-205ENST00000425244 SPACA7Q96KW9 195 aa9.95□□□□□ -0.82
CUX1-205ENST00000425244 NEDD4LQ96PU5 975 aa9.95□□□□□ -0.82
CUX1-205ENST00000425244 MCHR1Q99705 422 aa9.95□□□□□ -0.82
CUX1-205ENST00000425244 SNX7Q9UNH6 387 aa9.95□□□□□ -0.82
CUX1-205ENST00000425244 HS3ST3A1Q9Y663 406 aa9.95□□□□□ -0.82
CUX1-205ENST00000425244 COLEC10Q9Y6Z7 277 aa9.95□□□□□ -0.82
CUX1-205ENST00000425244 V9GYH0 126 aa9.95□□□□□ -0.82
CUX1-205ENST00000425244 SPTY2D1-AS1A0A0U1RR47 76 aa9.95□□□□□ -0.82
CUX1-205ENST00000425244 SYNDIG1LA6NDD5 238 aa9.95□□□□□ -0.82
CUX1-205ENST00000425244 ZNF860A6NHJ4 632 aa9.95□□□□□ -0.82
CUX1-205ENST00000425244 TFECO14948 347 aaPredicted RBP9.95□□□□□ -0.82
CUX1-205ENST00000425244 SDC3O75056 442 aa9.95□□□□□ -0.82
CUX1-205ENST00000425244 TNFP01375 233 aa9.95□□□□□ -0.82
CUX1-205ENST00000425244 EIF2S1P05198 315 aaKnown RBP9.95□□□□□ -0.82
CUX1-205ENST00000425244 ACP2P11117 423 aa9.95□□□□□ -0.82
CUX1-205ENST00000425244 CPN2P22792 545 aa9.95□□□□□ -0.82
CUX1-205ENST00000425244 SOX18P35713 384 aa9.95□□□□□ -0.82
CUX1-205ENST00000425244 PPM1FP49593 454 aaPredicted RBP9.95□□□□□ -0.82
CUX1-205ENST00000425244 CSNK1EP49674 416 aaKnown RBP9.95□□□□□ -0.82
CUX1-205ENST00000425244 CDH11P55287 796 aa9.95□□□□□ -0.82
CUX1-205ENST00000425244 OR2B6P58173 313 aa9.95□□□□□ -0.82
CUX1-205ENST00000425244 PSPHP78330 225 aa9.95□□□□□ -0.82
CUX1-205ENST00000425244 ZXDAP98168 799 aa9.95□□□□□ -0.82
CUX1-205ENST00000425244 ST3GAL3Q11203 375 aa9.95□□□□□ -0.82
CUX1-205ENST00000425244 FZD2Q14332 565 aa9.95□□□□□ -0.82
CUX1-205ENST00000425244 BAK1Q16611 211 aa9.95□□□□□ -0.82
CUX1-205ENST00000425244 FAM214AQ32MH5 1076 aa9.95□□□□□ -0.82
CUX1-205ENST00000425244 C3orf38Q5JPI3 329 aa9.95□□□□□ -0.82
CUX1-205ENST00000425244 CCNJQ5T5M9 372 aa9.95□□□□□ -0.82
CUX1-205ENST00000425244 RSBN1Q5VWQ0 802 aaPredicted RBP9.95□□□□□ -0.82
CUX1-205ENST00000425244 SIGIRRQ6IA17 410 aa9.95□□□□□ -0.82
CUX1-205ENST00000425244 VN1R4Q7Z5H5 301 aa9.95□□□□□ -0.82
CUX1-205ENST00000425244 GALNT12Q8IXK2 581 aa9.95□□□□□ -0.82
CUX1-205ENST00000425244 OR4F15Q8NGB8 312 aa9.95□□□□□ -0.82
CUX1-205ENST00000425244 OR10G6Q8NH81 332 aa9.95□□□□□ -0.82
CUX1-205ENST00000425244 SLC35A4Q96G79 324 aa9.95□□□□□ -0.82
CUX1-205ENST00000425244 ZNF681Q96N22 645 aa9.95□□□□□ -0.82
CUX1-205ENST00000425244 OR2A14Q96R47 310 aa9.95□□□□□ -0.82
CUX1-205ENST00000425244 ACTRT3Q9BYD9 372 aa9.95□□□□□ -0.82
CUX1-205ENST00000425244 MARCH7Q9H992 704 aa9.95□□□□□ -0.82
CUX1-205ENST00000425244 CACYBPQ9HB71 228 aaKnown RBP9.95□□□□□ -0.82
CUX1-205ENST00000425244 CHST2Q9Y4C5 530 aa9.95□□□□□ -0.82
CUX1-205ENST00000425244 SCN2AQ99250 2005 aa9.94□□□□□ -0.82
CUX1-205ENST00000425244 A0A1W2PQL4 384 aaPredicted RBP9.94□□□□□ -0.82
CUX1-205ENST00000425244 METTL12A8MUP2 240 aa9.94□□□□□ -0.82
CUX1-205ENST00000425244 K7ESF4 209 aa9.94□□□□□ -0.82
CUX1-205ENST00000425244 CCNKO75909 580 aa9.94□□□□□ -0.82
CUX1-205ENST00000425244 WNT1P04628 370 aa9.94□□□□□ -0.82
CUX1-205ENST00000425244 CPEP16870 476 aa9.94□□□□□ -0.82
CUX1-205ENST00000425244 CD38P28907 300 aa9.94□□□□□ -0.82
CUX1-205ENST00000425244 SSTR4P31391 388 aa9.94□□□□□ -0.82
CUX1-205ENST00000425244 FNTBP49356 437 aa9.94□□□□□ -0.82
CUX1-205ENST00000425244 DBPQ10586 325 aaPredicted RBP9.94□□□□□ -0.82
CUX1-205ENST00000425244 RAB40BQ12829 278 aa9.94□□□□□ -0.82
CUX1-205ENST00000425244 TSPAN31Q12999 210 aa9.94□□□□□ -0.82
CUX1-205ENST00000425244 SUZ12Q15022 739 aaKnown RBP9.94□□□□□ -0.82
CUX1-205ENST00000425244 ASPGQ86U10 573 aa9.94□□□□□ -0.82
CUX1-205ENST00000425244 TRIM48Q8IWZ4 208 aa9.94□□□□□ -0.82
CUX1-205ENST00000425244 Q8N9G6 341 aaPredicted RBP9.94□□□□□ -0.82
CUX1-205ENST00000425244 TMEM255BQ8WV15 326 aa9.94□□□□□ -0.82
CUX1-205ENST00000425244 DIO2Q92813 273 aa9.94□□□□□ -0.82
CUX1-205ENST00000425244 UFD1Q92890 307 aa9.94□□□□□ -0.82
CUX1-205ENST00000425244 SLC25A46Q96AG3 418 aa9.94□□□□□ -0.82
CUX1-205ENST00000425244 TMCO6Q96DC7 493 aa9.94□□□□□ -0.82
CUX1-205ENST00000425244 DIRAS2Q96HU8 199 aa9.94□□□□□ -0.82
CUX1-205ENST00000425244 KCTD7Q96MP8 289 aa9.94□□□□□ -0.82
CUX1-205ENST00000425244 ARHGDIGQ99819 225 aa9.94□□□□□ -0.82
CUX1-205ENST00000425244 ORAI3Q9BRQ5 295 aa9.94□□□□□ -0.82
CUX1-205ENST00000425244 SRMSQ9H3Y6 488 aa9.94□□□□□ -0.82
CUX1-205ENST00000425244 LIPT1Q9Y234 373 aa9.94□□□□□ -0.82
CUX1-205ENST00000425244 THADAQ6YHU6 1953 aa9.94□□□□□ -0.82
CUX1-205ENST00000425244 A0A1W2PQ09 198 aa9.94□□□□□ -0.82
CUX1-205ENST00000425244 SYT5O00445 386 aa9.94□□□□□ -0.82
CUX1-205ENST00000425244 SLC30A4O14863 429 aa9.94□□□□□ -0.82
CUX1-205ENST00000425244 DYRK3O43781 588 aa9.94□□□□□ -0.82
CUX1-205ENST00000425244 DNAJB6O75190 326 aa9.94□□□□□ -0.82
CUX1-205ENST00000425244 SLC2A10O95528 541 aa9.94□□□□□ -0.82
CUX1-205ENST00000425244 RCVRNP35243 200 aa9.94□□□□□ -0.82
CUX1-205ENST00000425244 RGS1Q08116 209 aa9.94□□□□□ -0.82
CUX1-205ENST00000425244 GPR68Q15743 365 aa9.94□□□□□ -0.82
CUX1-205ENST00000425244 ZNF79Q15937 498 aa9.94□□□□□ -0.82
CUX1-205ENST00000425244 ZNF791Q3KP31 576 aaPredicted RBP9.94□□□□□ -0.82
CUX1-205ENST00000425244 MINDY4Q4G0A6 757 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms