RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 GABRG3Q99928 467 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 LRRC61Q9BV99 259 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 TMED9Q9BVK6 235 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 ST6GALNAC4Q9H4F1 302 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 DLL4Q9NR61 685 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 SLC39A9Q9NUM3 307 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 C2orf42Q9NWW7 574 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 MARCH5Q9NX47 278 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 MIOSQ9NXC5 875 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 ANGPT4Q9Y264 503 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 ARL5AQ9Y689 179 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 CEP250Q9BV73 2442 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 NUP210Q8TEM1 1887 aaPredicted RBP3.3□□□□□ -1.88
TOP2A-201ENST00000423485 ZNF814B7Z6K7 855 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 ANKRD65E5RJM6 399 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 DNASE2O00115 360 aaPredicted RBP3.3□□□□□ -1.88
TOP2A-201ENST00000423485 CREBL2O60519 120 aaPredicted RBP3.3□□□□□ -1.88
TOP2A-201ENST00000423485 LTA4HP09960 611 aaKnown RBP3.3□□□□□ -1.88
TOP2A-201ENST00000423485 MMP11P24347 488 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 DCKP27707 260 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 NMBRP28336 390 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 PKLRP30613 574 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 PLK1P53350 603 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 MAXP61244 160 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 PMS2P3Q13401 168 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 RBM39Q14498 530 aaKnown RBP3.3□□□□□ -1.88
TOP2A-201ENST00000423485 GFOD2Q3B7J2 385 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 TMEM52BQ4KMG9 183 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 OAFQ86UD1 273 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 CCDC71Q8IV32 467 aaPredicted RBP3.3□□□□□ -1.88
TOP2A-201ENST00000423485 C10orf107Q8IVU9 208 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 TSPEARQ8WU66 669 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 DNASE2BQ8WZ79 361 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 UTP4Q969X6 686 aaKnown RBP3.3□□□□□ -1.88
TOP2A-201ENST00000423485 RBM15Q96T37 977 aaKnown RBP eCLIP3.3□□□□□ -1.886e-8■■□□□ 13.6
TOP2A-201ENST00000423485 KCNK16Q96T55 309 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 TDRD1Q9BXT4 1180 aaKnown RBP3.3□□□□□ -1.88
TOP2A-201ENST00000423485 EHD1Q9H4M9 534 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 PRORYQ9H606 182 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 NPAP1Q9NZP6 1156 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 SCOCQ9UIL1 159 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 PRPF19Q9UMS4 504 aaKnown RBP3.3□□□□□ -1.88
TOP2A-201ENST00000423485 ING4Q9UNL4 249 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 KLHL20Q9Y2M5 609 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 SPAG17Q6Q759 2223 aa3.3□□□□□ -1.88
TOP2A-201ENST00000423485 E9PBE3 544 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 MFAP3LO75121 409 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 SUPT7LO94864 414 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 CLDN7O95471 211 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 IFNA5P01569 189 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 TFP02787 698 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 STATHP02808 62 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 LIPFP07098 398 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 MDH1P40925 334 aaKnown RBP3.29□□□□□ -1.88
TOP2A-201ENST00000423485 KHKP50053 298 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 BIDP55957 195 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 GPR85P60893 370 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 PITPNAQ00169 270 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 DAG1Q14118 895 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 AGERQ15109 404 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 FAM189A2Q15884 450 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 HYAL4Q2M3T9 481 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 NADK2Q4G0N4 442 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 KLHL12Q53G59 568 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 SOWAHCQ53LP3 525 aaPredicted RBP3.29□□□□□ -1.88
TOP2A-201ENST00000423485 CGB2Q6NT52 195 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 Q6ZVL8 140 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 PRUNE1Q86TP1 453 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 TMEM173Q86WV6 379 aaPredicted RBP3.29□□□□□ -1.88
TOP2A-201ENST00000423485 PCNPQ8WW12 178 aaKnown RBP3.29□□□□□ -1.88
TOP2A-201ENST00000423485 EXOSC8Q96B26 276 aaKnown RBP3.29□□□□□ -1.88
TOP2A-201ENST00000423485 ATP6V1G3Q96LB4 118 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 DPH7Q9BTV6 452 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 PAPOLGQ9BWT3 736 aaKnown RBP3.29□□□□□ -1.88
TOP2A-201ENST00000423485 YTHDF1Q9BYJ9 559 aaKnown RBP3.29□□□□□ -1.88
TOP2A-201ENST00000423485 TXLNGYQ9BZA5 131 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 HAPLN2Q9GZV7 340 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 SLC2A8Q9NY64 477 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 BAIAP2L1Q9UHR4 511 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 SLC7A7Q9UM01 511 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 WBP11Q9Y2W2 641 aaKnown RBP3.29□□□□□ -1.88
TOP2A-201ENST00000423485 PLXNA2O75051 1894 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 FRMPD3Q5JV73 1810 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 NCOA6Q14686 2063 aaPredicted RBP3.29□□□□□ -1.88
TOP2A-201ENST00000423485 TCRBV4S1A1TA0A5B7 111 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 NDUFAB1O14561 156 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 PIN1P1O15428 100 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 TGFB1I1O43294 461 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 SLC37A4O43826 429 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 HCN1O60741 890 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 ATP6V1G2O95670 118 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 CD247P20963 164 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 GCGRP47871 477 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 OR3A4PP47883 348 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 CASP5P51878 434 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 ARFIP2P53365 341 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 SMIM11AP58511 58 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 DCDC1P59894 354 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 OGDHQ02218 1023 aa3.29□□□□□ -1.88
TOP2A-201ENST00000423485 GUCA2AQ02747 115 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms