RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 A0A0G2JPF8 293 aa15.54■□□□□ 0.08
COL7A1-202ENST00000422991 A0A1W2PQD3 144 aa15.54■□□□□ 0.08
COL7A1-202ENST00000422991 PINLYPA6NC86 204 aa15.54■□□□□ 0.08
COL7A1-202ENST00000422991 HNRNPCL2B2RXH8 293 aa15.54■□□□□ 0.08
COL7A1-202ENST00000422991 HNRNPCL3B7ZW38 293 aa15.54■□□□□ 0.08
COL7A1-202ENST00000422991 KLRC4-KLRK1H3BQV0 150 aa15.54■□□□□ 0.08
COL7A1-202ENST00000422991 SCDO00767 359 aa15.54■□□□□ 0.08
COL7A1-202ENST00000422991 SCO2O43819 266 aa15.54■□□□□ 0.08
COL7A1-202ENST00000422991 HNRNPCL1O60812 293 aaKnown RBP15.54■□□□□ 0.08
COL7A1-202ENST00000422991 TRIM3O75382 744 aaPredicted RBP15.54■□□□□ 0.08
COL7A1-202ENST00000422991 UGT2B17O75795 530 aa15.54■□□□□ 0.08
COL7A1-202ENST00000422991 SORBS2O94875 1100 aaKnown RBP15.54■□□□□ 0.08
COL7A1-202ENST00000422991 HNRNPCL4P0DMR1 293 aa15.54■□□□□ 0.08
COL7A1-202ENST00000422991 RPS4Y1P22090 263 aaKnown RBP15.54■□□□□ 0.08
COL7A1-202ENST00000422991 MEOX1P50221 254 aa15.54■□□□□ 0.08
COL7A1-202ENST00000422991 EEFSECP57772 596 aaKnown RBP15.54■□□□□ 0.08
COL7A1-202ENST00000422991 KCNJ2P63252 427 aa15.54■□□□□ 0.08
COL7A1-202ENST00000422991 LIPEQ05469 1076 aa15.54■□□□□ 0.08
COL7A1-202ENST00000422991 BNIP1Q12981 228 aa15.54■□□□□ 0.08
COL7A1-202ENST00000422991 MAPK14Q16539 360 aa15.54■□□□□ 0.08
COL7A1-202ENST00000422991 VMACQ2NL98 169 aa15.54■□□□□ 0.08
COL7A1-202ENST00000422991 KLHL26Q53HC5 615 aa15.54■□□□□ 0.08
COL7A1-202ENST00000422991 PDZK1Q5T2W1 519 aa15.54■□□□□ 0.08
COL7A1-202ENST00000422991 REEP3Q6NUK4 255 aa15.54■□□□□ 0.08
COL7A1-202ENST00000422991 PTRH1Q86Y79 214 aaKnown RBP15.54■□□□□ 0.08
COL7A1-202ENST00000422991 DEFB107AQ8IZN7 70 aa15.54■□□□□ 0.08
COL7A1-202ENST00000422991 HIPK4Q8NE63 616 aa15.54■□□□□ 0.08
COL7A1-202ENST00000422991 OR2T12Q8NG77 320 aa15.54■□□□□ 0.08
COL7A1-202ENST00000422991 ZNF597Q96LX8 424 aa15.54■□□□□ 0.08
COL7A1-202ENST00000422991 TBL1XR1Q9BZK7 514 aa15.54■□□□□ 0.08
COL7A1-202ENST00000422991 RTN4RQ9BZR6 473 aa15.54■□□□□ 0.08
COL7A1-202ENST00000422991 QRSL1Q9H0R6 528 aaKnown RBP15.54■□□□□ 0.08
COL7A1-202ENST00000422991 TUBA8Q9NY65 449 aaPredicted RBP15.54■□□□□ 0.08
COL7A1-202ENST00000422991 GMPR2Q9P2T1 348 aaKnown RBP15.54■□□□□ 0.08
COL7A1-202ENST00000422991 SUCOQ9UBS9 1254 aaKnown RBP15.54■□□□□ 0.08
COL7A1-202ENST00000422991 ANGPT4Q9Y264 503 aa15.54■□□□□ 0.08
COL7A1-202ENST00000422991 NINQ8N4C6 2090 aa15.54■□□□□ 0.08
COL7A1-202ENST00000422991 AGAP5A6NIR3 686 aa15.53■□□□□ 0.08
COL7A1-202ENST00000422991 LRRC3CA6NJW4 275 aa15.53■□□□□ 0.08
COL7A1-202ENST00000422991 DNAJA2O60884 412 aa15.53■□□□□ 0.08
COL7A1-202ENST00000422991 SNX4O95219 450 aa15.53■□□□□ 0.08
COL7A1-202ENST00000422991 PGM3O95394 542 aa15.53■□□□□ 0.08
COL7A1-202ENST00000422991 HPGDP15428 266 aa15.53■□□□□ 0.08
COL7A1-202ENST00000422991 CLK3P49761 638 aaKnown RBP15.53■□□□□ 0.08
COL7A1-202ENST00000422991 GSK3BP49841 420 aa15.53■□□□□ 0.08
COL7A1-202ENST00000422991 PCBP3P57721 371 aaKnown RBP15.53■□□□□ 0.08
COL7A1-202ENST00000422991 PMP22Q01453 160 aa15.53■□□□□ 0.08
COL7A1-202ENST00000422991 FOXO1Q12778 655 aa15.53■□□□□ 0.08
COL7A1-202ENST00000422991 NFATC3Q12968 1075 aa15.53■□□□□ 0.08
COL7A1-202ENST00000422991 COLEC12Q5KU26 742 aa15.53■□□□□ 0.08
COL7A1-202ENST00000422991 FNDC7Q5VTL7 733 aa15.53■□□□□ 0.08
COL7A1-202ENST00000422991 ERICH5Q6P6B1 374 aa15.53■□□□□ 0.08
COL7A1-202ENST00000422991 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.53■□□□□ 0.08
COL7A1-202ENST00000422991 HMGN2P46Q86SG4 172 aa15.53■□□□□ 0.08
COL7A1-202ENST00000422991 MARCH3Q86UD3 253 aa15.53■□□□□ 0.08
COL7A1-202ENST00000422991 SLC30A8Q8IWU4 369 aa15.53■□□□□ 0.08
COL7A1-202ENST00000422991 ZFP62Q8NB50 900 aaPredicted RBP15.53■□□□□ 0.08
COL7A1-202ENST00000422991 FAM98AQ8NCA5 519 aaKnown RBP15.53■□□□□ 0.08
COL7A1-202ENST00000422991 ZG16BQ96DA0 208 aa15.53■□□□□ 0.08
COL7A1-202ENST00000422991 TMEM41AQ96HV5 264 aa15.53■□□□□ 0.08
COL7A1-202ENST00000422991 C1orf21Q9H246 121 aa15.53■□□□□ 0.08
COL7A1-202ENST00000422991 ALG2Q9H553 416 aa15.53■□□□□ 0.08
COL7A1-202ENST00000422991 MTHFD2LQ9H903 347 aaPredicted RBP15.53■□□□□ 0.08
COL7A1-202ENST00000422991 TAS2R1Q9NYW7 299 aa15.53■□□□□ 0.08
COL7A1-202ENST00000422991 ADA2Q9NZK5 511 aa15.53■□□□□ 0.08
COL7A1-202ENST00000422991 DTNAQ9Y4J8 743 aa15.53■□□□□ 0.08
COL7A1-202ENST00000422991 HRH3Q9Y5N1 445 aa15.53■□□□□ 0.08
COL7A1-202ENST00000422991 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.53■□□□□ 0.08
COL7A1-202ENST00000422991 HELZ2Q9BYK8 2649 aaKnown RBP15.53■□□□□ 0.08
COL7A1-202ENST00000422991 C17orf51A8MQB3 221 aa15.52■□□□□ 0.08
COL7A1-202ENST00000422991 SNPHO15079 494 aa15.52■□□□□ 0.08
COL7A1-202ENST00000422991 ANGPTL1O95841 491 aa15.52■□□□□ 0.08
COL7A1-202ENST00000422991 PLA2G2AP14555 144 aa15.52■□□□□ 0.08
COL7A1-202ENST00000422991 ETS2P15036 469 aa15.52■□□□□ 0.08
COL7A1-202ENST00000422991 MASP1P48740 699 aa15.52■□□□□ 0.08
COL7A1-202ENST00000422991 INPP5JQ15735 1006 aaPredicted RBP15.52■□□□□ 0.08
COL7A1-202ENST00000422991 CD226Q15762 336 aa15.52■□□□□ 0.08
COL7A1-202ENST00000422991 BNC2Q6ZN30 1099 aaPredicted RBP15.52■□□□□ 0.08
COL7A1-202ENST00000422991 PACS2Q86VP3 889 aa15.52■□□□□ 0.08
COL7A1-202ENST00000422991 IFNEQ86WN2 208 aa15.52■□□□□ 0.08
COL7A1-202ENST00000422991 PEX5LQ8IYB4 626 aa15.52■□□□□ 0.08
COL7A1-202ENST00000422991 MICU2Q8IYU8 434 aa15.52■□□□□ 0.08
COL7A1-202ENST00000422991 ZNF614Q8N883 585 aa15.52■□□□□ 0.08
COL7A1-202ENST00000422991 SLC7A6OSQ96CW6 309 aaPredicted RBP15.52■□□□□ 0.08
COL7A1-202ENST00000422991 TAAR6Q96RI8 345 aa15.52■□□□□ 0.08
COL7A1-202ENST00000422991 BOKQ9UMX3 212 aaPredicted RBP15.52■□□□□ 0.08
COL7A1-202ENST00000422991 NCKAP5O14513 1909 aa15.52■□□□□ 0.07
COL7A1-202ENST00000422991 IGLV3-32A0A0A0MS00 114 aa15.51■□□□□ 0.07
COL7A1-202ENST00000422991 ELOVL7A1L3X0 281 aa15.51■□□□□ 0.07
COL7A1-202ENST00000422991 C2orf72A6NCS6 295 aa15.51■□□□□ 0.07
COL7A1-202ENST00000422991 PRORSD1PA6NEY8 169 aa15.51■□□□□ 0.07
COL7A1-202ENST00000422991 SERINC4A6NH21 518 aa15.51■□□□□ 0.07
COL7A1-202ENST00000422991 NDUFB5O43674 189 aa15.51■□□□□ 0.07
COL7A1-202ENST00000422991 GCM2O75603 506 aaPredicted RBP15.51■□□□□ 0.07
COL7A1-202ENST00000422991 GLSO94925 669 aaPredicted RBP15.51■□□□□ 0.07
COL7A1-202ENST00000422991 RASAL1O95294 804 aa15.51■□□□□ 0.07
COL7A1-202ENST00000422991 DBIP07108 87 aaKnown RBP15.51■□□□□ 0.07
COL7A1-202ENST00000422991 AQP1P29972 269 aa15.51■□□□□ 0.07
COL7A1-202ENST00000422991 RFC3P40938 356 aa15.51■□□□□ 0.07
COL7A1-202ENST00000422991 RNF144AP50876 292 aaPredicted RBP15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms