RNA–Protein interactions for RNA: ENST00000417814.3

TNFRSF8-203, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-203ENST00000417814 CDCA4Q9BXL8 241 aa12.35□□□□□ -0.43
TNFRSF8-203ENST00000417814 SEMA4CQ9C0C4 833 aa12.35□□□□□ -0.43
TNFRSF8-203ENST00000417814 NEUROD4Q9HD90 331 aa12.35□□□□□ -0.43
TNFRSF8-203ENST00000417814 C20orf141Q9NUB4 165 aa12.35□□□□□ -0.43
TNFRSF8-203ENST00000417814 PLCXD1Q9NUJ7 323 aa12.35□□□□□ -0.43
TNFRSF8-203ENST00000417814 MAPRE3Q9UPY8 281 aa12.35□□□□□ -0.43
TNFRSF8-203ENST00000417814 C4orf51C9J302 202 aa12.34□□□□□ -0.43
TNFRSF8-203ENST00000417814 BLOC1S5-TXNDC5H3BN57 136 aa12.34□□□□□ -0.43
TNFRSF8-203ENST00000417814 UGDHO60701 494 aa12.34□□□□□ -0.43
TNFRSF8-203ENST00000417814 KLHL18O94889 574 aa12.34□□□□□ -0.43
TNFRSF8-203ENST00000417814 UCHL1P09936 223 aa12.34□□□□□ -0.43
TNFRSF8-203ENST00000417814 ZNF888P0CJ79 500 aaPredicted RBP12.34□□□□□ -0.43
TNFRSF8-203ENST00000417814 CTSAP10619 480 aa12.34□□□□□ -0.43
TNFRSF8-203ENST00000417814 MPIP34949 423 aa12.34□□□□□ -0.43
TNFRSF8-203ENST00000417814 ADH7P40394 386 aa12.34□□□□□ -0.43
TNFRSF8-203ENST00000417814 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.34□□□□□ -0.43
TNFRSF8-203ENST00000417814 CDC20Q12834 499 aa12.34□□□□□ -0.43
TNFRSF8-203ENST00000417814 ANKRD54Q6NXT1 300 aa12.34□□□□□ -0.43
TNFRSF8-203ENST00000417814 CNKSR3Q6P9H4 555 aa12.34□□□□□ -0.43
TNFRSF8-203ENST00000417814 DPPA4Q7L190 304 aa12.34□□□□□ -0.43
TNFRSF8-203ENST00000417814 SIRT6Q8N6T7 355 aa12.34□□□□□ -0.43
TNFRSF8-203ENST00000417814 COX18Q8N8Q8 333 aa12.34□□□□□ -0.43
TNFRSF8-203ENST00000417814 OR4M1Q8NGD0 313 aa12.34□□□□□ -0.43
TNFRSF8-203ENST00000417814 OR52E1Q8NGJ3 308 aa12.34□□□□□ -0.43
TNFRSF8-203ENST00000417814 OR4Q3Q8NH05 313 aa12.34□□□□□ -0.43
TNFRSF8-203ENST00000417814 ZNF431Q8TF32 576 aaPredicted RBP12.34□□□□□ -0.43
TNFRSF8-203ENST00000417814 AP3S1Q92572 193 aa12.34□□□□□ -0.43
TNFRSF8-203ENST00000417814 SLC25A46Q96AG3 418 aa12.34□□□□□ -0.43
TNFRSF8-203ENST00000417814 UPRTQ96BW1 309 aa12.34□□□□□ -0.43
TNFRSF8-203ENST00000417814 NEURL3Q96EH8 262 aa12.34□□□□□ -0.43
TNFRSF8-203ENST00000417814 OR10A4Q9H209 315 aa12.34□□□□□ -0.43
TNFRSF8-203ENST00000417814 C3orf14Q9HBI5 128 aa12.34□□□□□ -0.43
TNFRSF8-203ENST00000417814 SIRT3Q9NTG7 399 aaPredicted RBP12.34□□□□□ -0.43
TNFRSF8-203ENST00000417814 PRKAG2Q9UGJ0 569 aa12.34□□□□□ -0.43
TNFRSF8-203ENST00000417814 GNG8Q9UK08 70 aa12.34□□□□□ -0.43
TNFRSF8-203ENST00000417814 SH3D21A4FU49 640 aa12.34□□□□□ -0.43
TNFRSF8-203ENST00000417814 IDSB3KWA1 339 aa12.34□□□□□ -0.43
TNFRSF8-203ENST00000417814 CHST10O43529 356 aa12.34□□□□□ -0.43
TNFRSF8-203ENST00000417814 LIMS3P0CW19 117 aa12.34□□□□□ -0.43
TNFRSF8-203ENST00000417814 LIMS4P0CW20 117 aa12.34□□□□□ -0.43
TNFRSF8-203ENST00000417814 ARHGDIBP52566 201 aa12.34□□□□□ -0.43
TNFRSF8-203ENST00000417814 CSNK1G2P78368 415 aa12.34□□□□□ -0.43
TNFRSF8-203ENST00000417814 PRR5P85299 388 aa12.34□□□□□ -0.43
TNFRSF8-203ENST00000417814 CDK3Q00526 305 aa12.34□□□□□ -0.43
TNFRSF8-203ENST00000417814 NTRK2Q16620 822 aa12.34□□□□□ -0.43
TNFRSF8-203ENST00000417814 MSANTD1Q6ZTZ1 278 aa12.34□□□□□ -0.43
TNFRSF8-203ENST00000417814 GPR135Q8IZ08 494 aa12.34□□□□□ -0.43
TNFRSF8-203ENST00000417814 PIAS4Q8N2W9 510 aaPredicted RBP12.34□□□□□ -0.43
TNFRSF8-203ENST00000417814 CPXM2Q8N436 756 aa12.34□□□□□ -0.43
TNFRSF8-203ENST00000417814 RASSF5Q8WWW0 418 aa12.34□□□□□ -0.43
TNFRSF8-203ENST00000417814 SNX18Q96RF0 628 aa12.34□□□□□ -0.43
TNFRSF8-203ENST00000417814 ALG8Q9BVK2 526 aa12.34□□□□□ -0.43
TNFRSF8-203ENST00000417814 TMEM38AQ9H6F2 299 aa12.34□□□□□ -0.43
TNFRSF8-203ENST00000417814 EVA1BQ9NVM1 165 aa12.34□□□□□ -0.43
TNFRSF8-203ENST00000417814 SIRT4Q9Y6E7 314 aaPredicted RBP12.34□□□□□ -0.43
TNFRSF8-203ENST00000417814 NLRC5Q86WI3 1866 aa12.34□□□□□ -0.43
TNFRSF8-203ENST00000417814 RLN1P04808 185 aa12.34□□□□□ -0.43
TNFRSF8-203ENST00000417814 GABRA3P34903 492 aa12.34□□□□□ -0.43
TNFRSF8-203ENST00000417814 KHKP50053 298 aa12.34□□□□□ -0.43
TNFRSF8-203ENST00000417814 KIAA1958Q8N8K9 716 aa12.34□□□□□ -0.43
TNFRSF8-203ENST00000417814 SNX33Q8WV41 574 aa12.34□□□□□ -0.43
TNFRSF8-203ENST00000417814 CXorf40BQ96DE9 158 aa12.34□□□□□ -0.43
TNFRSF8-203ENST00000417814 SLC41A3Q96GZ6 507 aa12.34□□□□□ -0.43
TNFRSF8-203ENST00000417814 C4orf36Q96KX1 117 aa12.34□□□□□ -0.43
TNFRSF8-203ENST00000417814 ZC4H2Q9NQZ6 224 aa12.34□□□□□ -0.43
TNFRSF8-203ENST00000417814 OR6C2Q9NZP2 312 aa12.34□□□□□ -0.43
TNFRSF8-203ENST00000417814 ACOD1A6NK06 481 aa12.33□□□□□ -0.44
TNFRSF8-203ENST00000417814 H7C1C5 153 aa12.33□□□□□ -0.44
TNFRSF8-203ENST00000417814 CDK2AP1O14519 115 aa12.33□□□□□ -0.44
TNFRSF8-203ENST00000417814 PRODHO43272 600 aa12.33□□□□□ -0.44
TNFRSF8-203ENST00000417814 ORC5O43913 435 aa12.33□□□□□ -0.44
TNFRSF8-203ENST00000417814 FKTNO75072 461 aa12.33□□□□□ -0.44
TNFRSF8-203ENST00000417814 ADH1CP00326 375 aa12.33□□□□□ -0.44
TNFRSF8-203ENST00000417814 HLA-DPB1P04440 258 aa12.33□□□□□ -0.44
TNFRSF8-203ENST00000417814 LCN6P62502 163 aa12.33□□□□□ -0.44
TNFRSF8-203ENST00000417814 MLLT11Q13015 90 aaPredicted RBP12.33□□□□□ -0.44
TNFRSF8-203ENST00000417814 EFR3AQ14156 821 aa12.33□□□□□ -0.44
TNFRSF8-203ENST00000417814 DMRTC1Q5HYR2 192 aa12.33□□□□□ -0.44
TNFRSF8-203ENST00000417814 OR4D9Q8NGE8 314 aa12.33□□□□□ -0.44
TNFRSF8-203ENST00000417814 CAMK1GQ96NX5 476 aa12.33□□□□□ -0.44
TNFRSF8-203ENST00000417814 CD93Q9NPY3 652 aa12.33□□□□□ -0.44
TNFRSF8-203ENST00000417814 NCKAP1Q9Y2A7 1128 aa12.33□□□□□ -0.44
TNFRSF8-203ENST00000417814 A0A1W2PQU0 124 aa12.33□□□□□ -0.44
TNFRSF8-203ENST00000417814 OR10H2O60403 315 aa12.33□□□□□ -0.44
TNFRSF8-203ENST00000417814 NUDT14O95848 222 aa12.33□□□□□ -0.44
TNFRSF8-203ENST00000417814 SOD1P00441 154 aa12.33□□□□□ -0.44
TNFRSF8-203ENST00000417814 TFF2Q03403 129 aa12.33□□□□□ -0.44
TNFRSF8-203ENST00000417814 ST3GAL3Q11203 375 aa12.33□□□□□ -0.44
TNFRSF8-203ENST00000417814 ARHGEF6Q15052 776 aa12.33□□□□□ -0.44
TNFRSF8-203ENST00000417814 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.33□□□□□ -0.44
TNFRSF8-203ENST00000417814 OR52E2Q8NGJ4 325 aa12.33□□□□□ -0.44
TNFRSF8-203ENST00000417814 CCDC32Q9BV29 185 aa12.33□□□□□ -0.44
TNFRSF8-203ENST00000417814 CNOT2Q9NZN8 540 aaKnown RBP12.33□□□□□ -0.44
TNFRSF8-203ENST00000417814 HMX3A6NHT5 357 aa12.33□□□□□ -0.44
TNFRSF8-203ENST00000417814 ERVH48-1M5A8F1 160 aa12.33□□□□□ -0.44
TNFRSF8-203ENST00000417814 AKAP8O43823 692 aaKnown RBP12.33□□□□□ -0.44
TNFRSF8-203ENST00000417814 UBXN7O94888 489 aa12.33□□□□□ -0.44
TNFRSF8-203ENST00000417814 IFNA16P05015 189 aa12.33□□□□□ -0.44
TNFRSF8-203ENST00000417814 LIPCP11150 499 aa12.33□□□□□ -0.44
TNFRSF8-203ENST00000417814 ARSBP15848 533 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms