RNA–Protein interactions for RNA: ENST00000415920.5

CPNE1-209, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-209ENST00000415920 OR6C70A6NIJ9 312 aa12.48□□□□□ -0.41
CPNE1-209ENST00000415920 TSPAN2O60636 221 aa12.48□□□□□ -0.41
CPNE1-209ENST00000415920 ABCB7O75027 752 aa12.48□□□□□ -0.41
CPNE1-209ENST00000415920 STX11O75558 287 aa12.48□□□□□ -0.41
CPNE1-209ENST00000415920 UTS2O95399 124 aa12.48□□□□□ -0.41
CPNE1-209ENST00000415920 IL33O95760 270 aa12.48□□□□□ -0.41
CPNE1-209ENST00000415920 PCGF2P35227 344 aa12.48□□□□□ -0.41
CPNE1-209ENST00000415920 RNF144AP50876 292 aaPredicted RBP12.48□□□□□ -0.41
CPNE1-209ENST00000415920 EFR3AQ14156 821 aa12.48□□□□□ -0.41
CPNE1-209ENST00000415920 GNA13Q14344 377 aa12.48□□□□□ -0.41
CPNE1-209ENST00000415920 OR1C1Q15619 314 aa12.48□□□□□ -0.41
CPNE1-209ENST00000415920 NTRK2Q16620 822 aa12.48□□□□□ -0.41
CPNE1-209ENST00000415920 VMACQ2NL98 169 aa12.48□□□□□ -0.41
CPNE1-209ENST00000415920 SAMD4BQ5PRF9 694 aaKnown RBP12.48□□□□□ -0.41
CPNE1-209ENST00000415920 PRAMEF20Q5VT98 475 aa12.48□□□□□ -0.41
CPNE1-209ENST00000415920 SP5Q6BEB4 398 aaPredicted RBP12.48□□□□□ -0.41
CPNE1-209ENST00000415920 ERICH5Q6P6B1 374 aa12.48□□□□□ -0.41
CPNE1-209ENST00000415920 FRRS1Q6ZNA5 592 aa12.48□□□□□ -0.41
CPNE1-209ENST00000415920 RTL4Q6ZR62 310 aa12.48□□□□□ -0.41
CPNE1-209ENST00000415920 CALHM3Q86XJ0 350 aa12.48□□□□□ -0.41
CPNE1-209ENST00000415920 GPALPP1Q8IXQ4 340 aa12.48□□□□□ -0.41
CPNE1-209ENST00000415920 MICU2Q8IYU8 434 aa12.48□□□□□ -0.41
CPNE1-209ENST00000415920 DND1Q8IYX4 353 aaKnown RBP12.48□□□□□ -0.41
CPNE1-209ENST00000415920 ZNF619Q8N2I2 560 aa12.48□□□□□ -0.41
CPNE1-209ENST00000415920 FAM156AQ8NDB6 213 aa12.48□□□□□ -0.41
CPNE1-209ENST00000415920 BBS10Q8TAM1 723 aa12.48□□□□□ -0.41
CPNE1-209ENST00000415920 SLC38A5Q8WUX1 472 aa12.48□□□□□ -0.41
CPNE1-209ENST00000415920 MCUR1Q96AQ8 359 aa12.48□□□□□ -0.41
CPNE1-209ENST00000415920 CCDC124Q96CT7 223 aaKnown RBP12.48□□□□□ -0.41
CPNE1-209ENST00000415920 TRNT1Q96Q11 434 aaKnown RBP12.48□□□□□ -0.41
CPNE1-209ENST00000415920 TAAR6Q96RI8 345 aa12.48□□□□□ -0.41
CPNE1-209ENST00000415920 CDRT15Q96T59 188 aa12.48□□□□□ -0.41
CPNE1-209ENST00000415920 SDF2Q99470 211 aa12.48□□□□□ -0.41
CPNE1-209ENST00000415920 BTBD10Q9BSF8 475 aa12.48□□□□□ -0.41
CPNE1-209ENST00000415920 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.48□□□□□ -0.41
CPNE1-209ENST00000415920 C1orf21Q9H246 121 aa12.48□□□□□ -0.41
CPNE1-209ENST00000415920 TMEM38AQ9H6F2 299 aa12.48□□□□□ -0.41
CPNE1-209ENST00000415920 METTL7AQ9H8H3 244 aa12.48□□□□□ -0.41
CPNE1-209ENST00000415920 CACYBPQ9HB71 228 aaKnown RBP12.48□□□□□ -0.41
CPNE1-209ENST00000415920 KLRF1Q9NZS2 232 aa12.48□□□□□ -0.41
CPNE1-209ENST00000415920 CALML5Q9NZT1 146 aa12.48□□□□□ -0.41
CPNE1-209ENST00000415920 FLRT3Q9NZU0 649 aa12.48□□□□□ -0.41
CPNE1-209ENST00000415920 TMEM181Q9P2C4 612 aa12.48□□□□□ -0.41
CPNE1-209ENST00000415920 MKLN1Q9UL63 735 aa12.48□□□□□ -0.41
CPNE1-209ENST00000415920 PRPF19Q9UMS4 504 aaKnown RBP12.48□□□□□ -0.41
CPNE1-209ENST00000415920 OTOGQ6ZRI0 2925 aa12.48□□□□□ -0.41
CPNE1-209ENST00000415920 PCNX3Q9H6A9 2034 aa12.48□□□□□ -0.41
CPNE1-209ENST00000415920 MYO7BQ6PIF6 2116 aa12.47□□□□□ -0.41
CPNE1-209ENST00000415920 PDZD2O15018 2839 aa12.47□□□□□ -0.41
CPNE1-209ENST00000415920 ELOVL7A1L3X0 281 aa12.47□□□□□ -0.41
CPNE1-209ENST00000415920 PRAMEF25A6NGN4 478 aa12.47□□□□□ -0.41
CPNE1-209ENST00000415920 PRSS44E7EML9 344 aa12.47□□□□□ -0.41
CPNE1-209ENST00000415920 TP53I11O14683 189 aa12.47□□□□□ -0.41
CPNE1-209ENST00000415920 GSTA4O15217 222 aa12.47□□□□□ -0.41
CPNE1-209ENST00000415920 HNRNPRO43390 633 aaKnown RBP12.47□□□□□ -0.41
CPNE1-209ENST00000415920 SCO2O43819 266 aa12.47□□□□□ -0.41
CPNE1-209ENST00000415920 DNAJA2O60884 412 aa12.47□□□□□ -0.41
CPNE1-209ENST00000415920 SLC25A12O75746 678 aa12.47□□□□□ -0.41
CPNE1-209ENST00000415920 STSP08842 583 aa12.47□□□□□ -0.41
CPNE1-209ENST00000415920 TFPTP0C1Z6 253 aa12.47□□□□□ -0.41
CPNE1-209ENST00000415920 CCL3P10147 92 aa12.47□□□□□ -0.41
CPNE1-209ENST00000415920 HPGDP15428 266 aa12.47□□□□□ -0.41
CPNE1-209ENST00000415920 CD96P40200 585 aa12.47□□□□□ -0.41
CPNE1-209ENST00000415920 GZMMP51124 257 aa12.47□□□□□ -0.41
CPNE1-209ENST00000415920 TDGF1P3P51864 188 aa12.47□□□□□ -0.41
CPNE1-209ENST00000415920 PNLIPRP2P54317 469 aa12.47□□□□□ -0.41
CPNE1-209ENST00000415920 RPP38P78345 283 aaKnown RBP12.47□□□□□ -0.41
CPNE1-209ENST00000415920 CHRNEQ04844 493 aa12.47□□□□□ -0.41
CPNE1-209ENST00000415920 RBBP4Q09028 425 aa12.47□□□□□ -0.41
CPNE1-209ENST00000415920 ADRM1Q16186 407 aa12.47□□□□□ -0.41
CPNE1-209ENST00000415920 ZSCAN26Q16670 478 aa12.47□□□□□ -0.41
CPNE1-209ENST00000415920 ZNF791Q3KP31 576 aaPredicted RBP12.47□□□□□ -0.41
CPNE1-209ENST00000415920 GRAMD1BQ3KR37 738 aa12.47□□□□□ -0.41
CPNE1-209ENST00000415920 LRRC23Q53EV4 343 aaPredicted RBP12.47□□□□□ -0.41
CPNE1-209ENST00000415920 ZNF324BQ6AW86 544 aaPredicted RBP12.47□□□□□ -0.41
CPNE1-209ENST00000415920 TYW3Q6IPR3 259 aaKnown RBP12.47□□□□□ -0.41
CPNE1-209ENST00000415920 REEP3Q6NUK4 255 aa12.47□□□□□ -0.41
CPNE1-209ENST00000415920 HIPK4Q8NE63 616 aa12.47□□□□□ -0.41
CPNE1-209ENST00000415920 HGDQ93099 445 aa12.47□□□□□ -0.41
CPNE1-209ENST00000415920 CLPTM1LQ96KA5 538 aa12.47□□□□□ -0.41
CPNE1-209ENST00000415920 ZNF583Q96ND8 569 aa12.47□□□□□ -0.41
CPNE1-209ENST00000415920 SIGLEC12Q96PQ1 595 aa12.47□□□□□ -0.41
CPNE1-209ENST00000415920 TREX2Q9BQ50 279 aaPredicted RBP12.47□□□□□ -0.41
CPNE1-209ENST00000415920 THTPAQ9BU02 230 aa12.47□□□□□ -0.41
CPNE1-209ENST00000415920 RNF32Q9H0A6 362 aa12.47□□□□□ -0.41
CPNE1-209ENST00000415920 QRSL1Q9H0R6 528 aaKnown RBP12.47□□□□□ -0.41
CPNE1-209ENST00000415920 SLC38A1Q9H2H9 487 aa12.47□□□□□ -0.41
CPNE1-209ENST00000415920 LRMDAQ9H2I8 198 aa12.47□□□□□ -0.41
CPNE1-209ENST00000415920 POLE3Q9NRF9 147 aa12.47□□□□□ -0.41
CPNE1-209ENST00000415920 ANKRD17O75179 2603 aaKnown RBP12.46□□□□□ -0.41
CPNE1-209ENST00000415920 CENPVL1A0A0U1RR11 272 aa12.46□□□□□ -0.41
CPNE1-209ENST00000415920 PRORSD1PA6NEY8 169 aa12.46□□□□□ -0.41
CPNE1-209ENST00000415920 G3V3Y1 287 aa12.46□□□□□ -0.41
CPNE1-209ENST00000415920 SCDO00767 359 aa12.46□□□□□ -0.41
CPNE1-209ENST00000415920 FCMRO60667 390 aa12.46□□□□□ -0.41
CPNE1-209ENST00000415920 DNAJC8O75937 253 aaPredicted RBP12.46□□□□□ -0.41
CPNE1-209ENST00000415920 WISP2O76076 250 aa12.46□□□□□ -0.41
CPNE1-209ENST00000415920 OXSR1O95747 527 aaPredicted RBP12.46□□□□□ -0.41
CPNE1-209ENST00000415920 OPN1SWP03999 348 aa12.46□□□□□ -0.41
CPNE1-209ENST00000415920 NAGAP17050 411 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 123.4 ms