RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 KCTD3Q9Y597 815 aa8.79□□□□□ -1
SNHG3-201ENST00000413987 SPEGQ15772 3267 aa8.79□□□□□ -1
SNHG3-201ENST00000413987 ANKRD36A6QL64 1941 aa8.79□□□□□ -1
SNHG3-201ENST00000413987 OR6C70A6NIJ9 312 aa8.78□□□□□ -1
SNHG3-201ENST00000413987 A8MX80 341 aa8.78□□□□□ -1
SNHG3-201ENST00000413987 WASH3PC4AMC7 463 aa8.78□□□□□ -1
SNHG3-201ENST00000413987 C22orf46C9J442 243 aa8.78□□□□□ -1
SNHG3-201ENST00000413987 ATXN1LP0C7T5 689 aaKnown RBP8.78□□□□□ -1
SNHG3-201ENST00000413987 DBTP11182 482 aaKnown RBP8.78□□□□□ -1
SNHG3-201ENST00000413987 CR2P20023 1033 aa8.78□□□□□ -1
SNHG3-201ENST00000413987 MALP21145 153 aa8.78□□□□□ -1
SNHG3-201ENST00000413987 IGFBP5P24593 272 aa8.78□□□□□ -1
SNHG3-201ENST00000413987 ERVK-8P63133 956 aa8.78□□□□□ -1
SNHG3-201ENST00000413987 TFF2Q03403 129 aa8.78□□□□□ -1
SNHG3-201ENST00000413987 MGAT2Q10469 447 aa8.78□□□□□ -1
SNHG3-201ENST00000413987 ZMAT1Q5H9K5 638 aa8.78□□□□□ -1
SNHG3-201ENST00000413987 LAPTM4BQ86VI4 370 aa8.78□□□□□ -1
SNHG3-201ENST00000413987 FOXRED2Q8IWF2 684 aa8.78□□□□□ -1
SNHG3-201ENST00000413987 CADM2Q8N3J6 435 aa8.78□□□□□ -1
SNHG3-201ENST00000413987 PTGR2Q8N8N7 351 aaPredicted RBP8.78□□□□□ -1
SNHG3-201ENST00000413987 SNIP1Q8TAD8 396 aaKnown RBP8.78□□□□□ -1
SNHG3-201ENST00000413987 RHEBL1Q8TAI7 183 aa8.78□□□□□ -1
SNHG3-201ENST00000413987 PIGQQ9BRB3 760 aa8.78□□□□□ -1
SNHG3-201ENST00000413987 GABARAPL1Q9H0R8 117 aa8.78□□□□□ -1
SNHG3-201ENST00000413987 OSGEPL1Q9H4B0 414 aa8.78□□□□□ -1
SNHG3-201ENST00000413987 TUBB1Q9H4B7 451 aa8.78□□□□□ -1
SNHG3-201ENST00000413987 ZBTB20Q9HC78 741 aaPredicted RBP8.78□□□□□ -1
SNHG3-201ENST00000413987 PRSS50Q9UI38 385 aa8.78□□□□□ -1
SNHG3-201ENST00000413987 NUP50Q9UKX7 468 aa8.78□□□□□ -1
SNHG3-201ENST00000413987 USP22Q9UPT9 525 aa8.78□□□□□ -1
SNHG3-201ENST00000413987 GMPPBQ9Y5P6 360 aa8.78□□□□□ -1
SNHG3-201ENST00000413987 PUS1Q9Y606 427 aaKnown RBP eCLIP8.78□□□□□ -1
SNHG3-201ENST00000413987 CACNG2Q9Y698 323 aa8.78□□□□□ -1
SNHG3-201ENST00000413987 DENND4AQ7Z401 1863 aa8.78□□□□□ -1
SNHG3-201ENST00000413987 A0A1W2PQ72 361 aa8.78□□□□□ -1
SNHG3-201ENST00000413987 C2CD4DB7Z1M9 353 aa8.78□□□□□ -1
SNHG3-201ENST00000413987 SAP30O75446 220 aa8.78□□□□□ -1
SNHG3-201ENST00000413987 WISP3O95389 354 aaPredicted RBP8.78□□□□□ -1
SNHG3-201ENST00000413987 CISD3P0C7P0 127 aa8.78□□□□□ -1
SNHG3-201ENST00000413987 HLA-EP13747 358 aa8.78□□□□□ -1
SNHG3-201ENST00000413987 CLCN7P51798 805 aa8.78□□□□□ -1
SNHG3-201ENST00000413987 ITGA1P56199 1179 aa8.78□□□□□ -1
SNHG3-201ENST00000413987 PLAURQ03405 335 aa8.78□□□□□ -1
SNHG3-201ENST00000413987 GPR19Q15760 415 aa8.78□□□□□ -1
SNHG3-201ENST00000413987 ESCO2Q56NI9 601 aa8.78□□□□□ -1
SNHG3-201ENST00000413987 PRRT3Q5FWE3 981 aa8.78□□□□□ -1
SNHG3-201ENST00000413987 ARMCX4Q5H9R4 360 aa8.78□□□□□ -1
SNHG3-201ENST00000413987 C1orf94Q6P1W5 598 aa8.78□□□□□ -1
SNHG3-201ENST00000413987 TMEM88Q6PEY1 159 aa8.78□□□□□ -1
SNHG3-201ENST00000413987 BRAT1Q6PJG6 821 aa8.78□□□□□ -1
SNHG3-201ENST00000413987 DLEU7Q6UYE1 221 aa8.78□□□□□ -1
SNHG3-201ENST00000413987 CCDC190Q86UF4 302 aa8.78□□□□□ -1
SNHG3-201ENST00000413987 CACUL1Q86Y37 369 aa8.78□□□□□ -1
SNHG3-201ENST00000413987 MRPL41Q8IXM3 137 aaKnown RBP8.78□□□□□ -1
SNHG3-201ENST00000413987 SLC22A15Q8IZD6 547 aa8.78□□□□□ -1
SNHG3-201ENST00000413987 OR5T1Q8NG75 326 aa8.78□□□□□ -1
SNHG3-201ENST00000413987 OR2T12Q8NG77 320 aa8.78□□□□□ -1
SNHG3-201ENST00000413987 ZCCHC14Q8WYQ9 949 aaKnown RBP8.78□□□□□ -1
SNHG3-201ENST00000413987 VOPP1Q96AW1 172 aa8.78□□□□□ -1
SNHG3-201ENST00000413987 ZNF514Q96K75 400 aaPredicted RBP8.78□□□□□ -1
SNHG3-201ENST00000413987 MEGF10Q96KG7 1140 aa8.78□□□□□ -1
SNHG3-201ENST00000413987 COQ10AQ96MF6 247 aa8.78□□□□□ -1
SNHG3-201ENST00000413987 GUCD1Q96NT3 240 aa8.78□□□□□ -1
SNHG3-201ENST00000413987 TTYH2Q9BSA4 534 aa8.78□□□□□ -1
SNHG3-201ENST00000413987 SLAMF8Q9P0V8 285 aa8.78□□□□□ -1
SNHG3-201ENST00000413987 SERGEFQ9UGK8 458 aa8.78□□□□□ -1
SNHG3-201ENST00000413987 CD207Q9UJ71 328 aa8.78□□□□□ -1
SNHG3-201ENST00000413987 SAMHD1Q9Y3Z3 626 aaKnown RBP8.78□□□□□ -1
SNHG3-201ENST00000413987 ARL5AQ9Y689 179 aa8.78□□□□□ -1
SNHG3-201ENST00000413987 ZFC3H1O60293 1989 aaKnown RBP8.78□□□□□ -1
SNHG3-201ENST00000413987 MEIOCA2RUB1 952 aa8.77□□□□□ -1.01
SNHG3-201ENST00000413987 SH2D7A6NKC9 451 aaPredicted RBP8.77□□□□□ -1.01
SNHG3-201ENST00000413987 SLC9A3R1O14745 358 aaPredicted RBP8.77□□□□□ -1.01
SNHG3-201ENST00000413987 STX7O15400 261 aaKnown RBP8.77□□□□□ -1.01
SNHG3-201ENST00000413987 NOS1APO75052 506 aaPredicted RBP8.77□□□□□ -1.01
SNHG3-201ENST00000413987 APOL3O95236 402 aa8.77□□□□□ -1.01
SNHG3-201ENST00000413987 THBS1P07996 1170 aa8.77□□□□□ -1.01
SNHG3-201ENST00000413987 ALPIP09923 528 aa8.77□□□□□ -1.01
SNHG3-201ENST00000413987 CTPS1P17812 591 aa8.77□□□□□ -1.01
SNHG3-201ENST00000413987 NT5EP21589 574 aa8.77□□□□□ -1.01
SNHG3-201ENST00000413987 ACHEP22303 614 aa8.77□□□□□ -1.01
SNHG3-201ENST00000413987 GJA4P35212 333 aa8.77□□□□□ -1.01
SNHG3-201ENST00000413987 SRP54P61011 504 aaKnown RBP8.77□□□□□ -1.01
SNHG3-201ENST00000413987 CACNG1Q06432 222 aa8.77□□□□□ -1.01
SNHG3-201ENST00000413987 MOGAT2Q3SYC2 334 aa8.77□□□□□ -1.01
SNHG3-201ENST00000413987 ATP6AP1LQ52LC2 224 aa8.77□□□□□ -1.01
SNHG3-201ENST00000413987 ZNF425Q6IV72 752 aa8.77□□□□□ -1.01
SNHG3-201ENST00000413987 SLC25A25Q6KCM7 469 aa8.77□□□□□ -1.01
SNHG3-201ENST00000413987 YRDCQ86U90 279 aaKnown RBP8.77□□□□□ -1.01
SNHG3-201ENST00000413987 ZSWIM9Q86XI8 627 aa8.77□□□□□ -1.01
SNHG3-201ENST00000413987 YAF2Q8IY57 180 aa8.77□□□□□ -1.01
SNHG3-201ENST00000413987 HS3ST5Q8IZT8 346 aa8.77□□□□□ -1.01
SNHG3-201ENST00000413987 NLGN4XQ8N0W4 816 aa8.77□□□□□ -1.01
SNHG3-201ENST00000413987 LIX1Q8N485 282 aa8.77□□□□□ -1.01
SNHG3-201ENST00000413987 TBC1D19Q8N5T2 526 aa8.77□□□□□ -1.01
SNHG3-201ENST00000413987 OR5H6Q8NGV6 325 aa8.77□□□□□ -1.01
SNHG3-201ENST00000413987 ZFAND1Q8TCF1 268 aa8.77□□□□□ -1.01
SNHG3-201ENST00000413987 C16orf58Q96GQ5 468 aa8.77□□□□□ -1.01
SNHG3-201ENST00000413987 TEX37Q96LM6 180 aa8.77□□□□□ -1.01
SNHG3-201ENST00000413987 ZNF583Q96ND8 569 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms