RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 EFNB2P52799 333 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 ARFIP1P53367 373 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 SESN3P58005 492 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 PLP1P60201 277 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 CCT2P78371 535 aaKnown RBP-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 PDE1BQ01064 536 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 MAB21L1Q13394 359 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 SPARCL1Q14515 664 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 ABRAXAS2Q15018 415 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 ACAP2Q15057 778 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 QRICH1Q2TAL8 776 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 TMEM35AQ53FP2 167 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 ASPRV1Q53RT3 343 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 ACSBG2Q5FVE4 666 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 ARMCX4Q5H9R4 360 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 CXorf66Q5JRM2 361 aaPredicted RBP-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 PAPPA-AS1Q5QFB9 102 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 CERCAMQ5T4B2 595 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 FAM69AQ5T7M9 428 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 GPR107Q5VW38 600 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 REP15Q6BDI9 236 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 NEK5Q6P3R8 708 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 AAGABQ6PD74 315 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 KLHL35Q6PF15 583 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 B3GLCTQ6Y288 498 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 GCNT7Q6ZNI0 430 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 ZNF833PQ6ZTB9 187 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 GET4Q7L5D6 327 aaPredicted RBP-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 FAM19A1Q7Z5A9 133 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 WDR75Q8IWA0 830 aaKnown RBP-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 MCEMP1Q8IX19 187 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 KLHL7Q8IXQ5 586 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 CDK20Q8IZL9 346 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 SLC22A18ASQ8N1D0 253 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 NGEFQ8N5V2 710 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 EIF4E3Q8N5X7 224 aaKnown RBP-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 FSIP1Q8NA03 581 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 CYB561A3Q8NBI2 242 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 OR1M1Q8NGA1 313 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 OR10H4Q8NGA5 316 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 OR51G2Q8NGK0 314 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 OR9I1Q8NGQ6 314 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 OR2W6PQ8NHA6 318 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 OR14L1PQ8NHC6 308 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 ZNF418Q8TF45 676 aaPredicted RBP-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 ANKRD49Q8WVL7 239 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 KCNE4Q8WWG9 221 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 POMGNT1Q8WZA1 660 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 TAMM41Q96BW9 452 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 MOB3AQ96BX8 217 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 PLEKHB2Q96CS7 222 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 PABPC5Q96DU9 382 aaKnown RBP-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 TMX3Q96JJ7 454 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 FAM161BQ96MY7 647 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 ZNF396Q96N95 335 aaPredicted RBP-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 TTC25Q96NG3 672 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 C1orf50Q9BV19 199 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 ADI1Q9BV57 179 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 PAPOLGQ9BWT3 736 aaKnown RBP-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 MS4A7Q9GZW8 240 aaPredicted RBP-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 NEUROG2Q9H2A3 272 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 CPVLQ9H3G5 476 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 DPEP2Q9H4A9 486 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 DPEP3Q9H4B8 488 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 CERS4Q9HA82 394 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 APOBEC3GQ9HC16 384 aaKnown RBP-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 CABP5Q9NP86 173 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 AGPAT4Q9NRZ5 378 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 CISHQ9NSE2 258 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 EHD2Q9NZN4 543 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 OR6C3Q9NZP0 311 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 SEC14L3Q9UDX4 400 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 LCMT1Q9UIC8 334 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 SMC3Q9UQE7 1217 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 HPSEQ9Y251 543 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 TMED3Q9Y3Q3 217 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 WDR45Q9Y484 360 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 FLVCR1Q9Y5Y0 555 aa-1.97□□□□□ -2.72
RNU4-88P-201ENST00000411220 FER1L5A0AVI2 2057 aa-1.97□□□□□ -2.73
RNU4-88P-201ENST00000411220 ITIH6Q6UXX5 1313 aa-1.97□□□□□ -2.73
RNU4-88P-201ENST00000411220 PTPRSQ13332 1948 aa-1.97□□□□□ -2.73
RNU4-88P-201ENST00000411220 FREM3P0C091 2139 aa-1.97□□□□□ -2.73
RNU4-88P-201ENST00000411220 SSC5DA1L4H1 1573 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 ADAMTS12P58397 1594 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 A0A0J9YXY3 114 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 A0A1B0GVG6 124 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 A0A1W2PRG0 241 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 GMNCA6NCL1 334 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 CXorf65A6NEN9 183 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 C2orf70A6NJV1 201 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 C2orf81A6NN90 581 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 NPIPB9F8W1W9 429 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 INMT-MINDY4F8WBC2 141 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 TMEM250H0YL14 139 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 K7EQG2 157 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 MFNGO00587 321 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 ATP2A1O14983 1001 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 NPHP1O15259 732 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 CA12O43570 354 aa-1.98□□□□□ -2.73
RNU4-88P-201ENST00000411220 NCK2O43639 380 aa-1.98□□□□□ -2.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms