RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 GNAO1P09471 354 aa11.48□□□□□ -0.57
CHMP3-204ENST00000409727 UBTFL6P0CB48 400 aaPredicted RBP11.48□□□□□ -0.57
CHMP3-204ENST00000409727 CDK4P11802 303 aa11.48□□□□□ -0.57
CHMP3-204ENST00000409727 CYP4B1P13584 511 aa11.48□□□□□ -0.57
CHMP3-204ENST00000409727 HPGDP15428 266 aa11.48□□□□□ -0.57
CHMP3-204ENST00000409727 PTNP21246 168 aa11.48□□□□□ -0.57
CHMP3-204ENST00000409727 IGFBP5P24593 272 aa11.48□□□□□ -0.57
CHMP3-204ENST00000409727 OTX2P32243 289 aa11.48□□□□□ -0.57
CHMP3-204ENST00000409727 KRT20P35900 424 aa11.48□□□□□ -0.57
CHMP3-204ENST00000409727 ATP12AP54707 1039 aa11.48□□□□□ -0.57
CHMP3-204ENST00000409727 SLC26A5P58743 744 aa11.48□□□□□ -0.57
CHMP3-204ENST00000409727 DCAF7P61962 342 aa11.48□□□□□ -0.57
CHMP3-204ENST00000409727 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.48□□□□□ -0.57
CHMP3-204ENST00000409727 MICAQ29983 383 aa11.48□□□□□ -0.57
CHMP3-204ENST00000409727 BTBD16Q32M84 506 aa11.48□□□□□ -0.57
CHMP3-204ENST00000409727 RNF220Q5VTB9 566 aa11.48□□□□□ -0.57
CHMP3-204ENST00000409727 PLEKHM3Q6ZWE6 761 aa11.48□□□□□ -0.57
CHMP3-204ENST00000409727 SLC5A8Q8N695 610 aa11.48□□□□□ -0.57
CHMP3-204ENST00000409727 OR5M3Q8NGP4 307 aa11.48□□□□□ -0.57
CHMP3-204ENST00000409727 RNF217Q8TC41 542 aa11.48□□□□□ -0.57
CHMP3-204ENST00000409727 CNOT9Q92600 299 aaKnown RBP11.48□□□□□ -0.57
CHMP3-204ENST00000409727 DIO2Q92813 273 aa11.48□□□□□ -0.57
CHMP3-204ENST00000409727 VMP1Q96GC9 406 aa11.48□□□□□ -0.57
CHMP3-204ENST00000409727 FEVQ99581 238 aa11.48□□□□□ -0.57
CHMP3-204ENST00000409727 SEMA4CQ9C0C4 833 aa11.48□□□□□ -0.57
CHMP3-204ENST00000409727 GABARAPL1Q9H0R8 117 aa11.48□□□□□ -0.57
CHMP3-204ENST00000409727 ARMC7Q9H6L4 198 aa11.48□□□□□ -0.57
CHMP3-204ENST00000409727 TMEFF2Q9UIK5 374 aaPredicted RBP11.48□□□□□ -0.57
CHMP3-204ENST00000409727 KCND3Q9UK17 655 aa11.48□□□□□ -0.57
CHMP3-204ENST00000409727 MRTO4Q9UKD2 239 aaKnown RBP11.48□□□□□ -0.57
CHMP3-204ENST00000409727 PCDHGA3Q9Y5H0 932 aa11.48□□□□□ -0.57
CHMP3-204ENST00000409727 ORC6Q9Y5N6 252 aa11.48□□□□□ -0.57
CHMP3-204ENST00000409727 HS3ST3B1Q9Y662 390 aa11.48□□□□□ -0.57
CHMP3-204ENST00000409727 CFAP54Q96N23 3096 aa11.48□□□□□ -0.57
CHMP3-204ENST00000409727 MASP2O00187 686 aa11.47□□□□□ -0.57
CHMP3-204ENST00000409727 ICOSLGO75144 302 aa11.47□□□□□ -0.57
CHMP3-204ENST00000409727 UTS2O95399 124 aa11.47□□□□□ -0.57
CHMP3-204ENST00000409727 IL33O95760 270 aa11.47□□□□□ -0.57
CHMP3-204ENST00000409727 CELA2AP08217 269 aa11.47□□□□□ -0.57
CHMP3-204ENST00000409727 ELAVL4P26378 380 aaKnown RBP11.47□□□□□ -0.57
CHMP3-204ENST00000409727 ABCD3P28288 659 aa11.47□□□□□ -0.57
CHMP3-204ENST00000409727 NOVA1P51513 510 aaKnown RBP11.47□□□□□ -0.57
CHMP3-204ENST00000409727 PLAURQ03405 335 aa11.47□□□□□ -0.57
CHMP3-204ENST00000409727 PCOLCEQ15113 449 aa11.47□□□□□ -0.57
CHMP3-204ENST00000409727 PDK3Q15120 406 aa11.47□□□□□ -0.57
CHMP3-204ENST00000409727 SEC23BQ15437 767 aa11.47□□□□□ -0.57
CHMP3-204ENST00000409727 ZNF141Q15928 474 aa11.47□□□□□ -0.57
CHMP3-204ENST00000409727 DCST1Q5T197 706 aa11.47□□□□□ -0.57
CHMP3-204ENST00000409727 RANBP3LQ86VV4 465 aaPredicted RBP11.47□□□□□ -0.57
CHMP3-204ENST00000409727 DHRSXQ8N5I4 330 aa11.47□□□□□ -0.57
CHMP3-204ENST00000409727 ADAMTS16Q8TE57 1224 aa11.47□□□□□ -0.57
CHMP3-204ENST00000409727 TFAP2CQ92754 450 aa11.47□□□□□ -0.57
CHMP3-204ENST00000409727 GTPBP3Q969Y2 492 aaKnown RBP11.47□□□□□ -0.57
CHMP3-204ENST00000409727 OMA1Q96E52 524 aa11.47□□□□□ -0.57
CHMP3-204ENST00000409727 NRBF2Q96F24 287 aa11.47□□□□□ -0.57
CHMP3-204ENST00000409727 RIBC2Q9H4K1 309 aa11.47□□□□□ -0.57
CHMP3-204ENST00000409727 KRT84Q9NSB2 600 aa11.47□□□□□ -0.57
CHMP3-204ENST00000409727 USE1Q9NZ43 259 aa11.47□□□□□ -0.57
CHMP3-204ENST00000409727 TCFL5Q9UL49 500 aa11.47□□□□□ -0.57
CHMP3-204ENST00000409727 TMCC3Q9ULS5 477 aa11.47□□□□□ -0.57
CHMP3-204ENST00000409727 PCDHGA10Q9Y5H3 936 aa11.47□□□□□ -0.57
CHMP3-204ENST00000409727 IGHV1-45A0A0A0MS14 117 aa11.46□□□□□ -0.57
CHMP3-204ENST00000409727 NPIPB9F8W1W9 429 aa11.46□□□□□ -0.57
CHMP3-204ENST00000409727 DENRO43583 198 aaKnown RBP11.46□□□□□ -0.57
CHMP3-204ENST00000409727 GMFGO60234 142 aa11.46□□□□□ -0.57
CHMP3-204ENST00000409727 DKK1O94907 266 aa11.46□□□□□ -0.57
CHMP3-204ENST00000409727 RYKP34925 604 aa11.46□□□□□ -0.57
CHMP3-204ENST00000409727 POLR2IP36954 125 aaKnown RBP11.46□□□□□ -0.57
CHMP3-204ENST00000409727 LIMS1P48059 325 aa11.46□□□□□ -0.57
CHMP3-204ENST00000409727 ST13P50502 369 aaKnown RBP11.46□□□□□ -0.57
CHMP3-204ENST00000409727 ZNF136P52737 540 aa11.46□□□□□ -0.57
CHMP3-204ENST00000409727 PSMD4P55036 377 aaKnown RBP11.46□□□□□ -0.57
CHMP3-204ENST00000409727 GABREP78334 506 aa11.46□□□□□ -0.57
CHMP3-204ENST00000409727 CMPK2Q5EBM0 449 aa11.46□□□□□ -0.57
CHMP3-204ENST00000409727 PODNL1Q6PEZ8 512 aa11.46□□□□□ -0.57
CHMP3-204ENST00000409727 OFCC1Q8IZS5 231 aa11.46□□□□□ -0.57
CHMP3-204ENST00000409727 ZNF441Q8N8Z8 693 aa11.46□□□□□ -0.57
CHMP3-204ENST00000409727 AQP11Q8NBQ7 271 aa11.46□□□□□ -0.57
CHMP3-204ENST00000409727 SLC7A13Q8TCU3 470 aa11.46□□□□□ -0.57
CHMP3-204ENST00000409727 PMM1Q92871 262 aa11.46□□□□□ -0.57
CHMP3-204ENST00000409727 MBOAT4Q96T53 435 aa11.46□□□□□ -0.57
CHMP3-204ENST00000409727 NIPSNAP1Q9BPW8 284 aa11.46□□□□□ -0.57
CHMP3-204ENST00000409727 SPRY4Q9C004 299 aa11.46□□□□□ -0.57
CHMP3-204ENST00000409727 ZBTB20Q9HC78 741 aaPredicted RBP11.46□□□□□ -0.57
CHMP3-204ENST00000409727 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.46□□□□□ -0.57
CHMP3-204ENST00000409727 UBAP1Q9NZ09 502 aa11.46□□□□□ -0.57
CHMP3-204ENST00000409727 ACAD8Q9UKU7 415 aa11.46□□□□□ -0.57
CHMP3-204ENST00000409727 SDK2Q58EX2 2172 aa11.46□□□□□ -0.57
CHMP3-204ENST00000409727 LOC102723996A0A087X1L8 192 aa11.46□□□□□ -0.58
CHMP3-204ENST00000409727 PROB1E7EW31 1015 aa11.46□□□□□ -0.58
CHMP3-204ENST00000409727 SCDO00767 359 aa11.46□□□□□ -0.58
CHMP3-204ENST00000409727 OR10H3O60404 316 aa11.46□□□□□ -0.58
CHMP3-204ENST00000409727 OXSR1O95747 527 aaPredicted RBP11.46□□□□□ -0.58
CHMP3-204ENST00000409727 CSTAP01040 98 aa11.46□□□□□ -0.58
CHMP3-204ENST00000409727 CYC1P08574 325 aa11.46□□□□□ -0.58
CHMP3-204ENST00000409727 COX6A1P12074 109 aa11.46□□□□□ -0.58
CHMP3-204ENST00000409727 HTR2AP28223 471 aa11.46□□□□□ -0.58
CHMP3-204ENST00000409727 DLSTP36957 453 aa11.46□□□□□ -0.58
CHMP3-204ENST00000409727 CAPGP40121 348 aa11.46□□□□□ -0.58
CHMP3-204ENST00000409727 HMGA2P52926 109 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms